RNA–Protein interactions for RNA: ENST00000547065.1

VDR-204, Transcript of vitamin D receptor, humanhuman

TSL 2

Gene VDR, Length 1,782 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-204ENST00000547065 FAM78BQ5VT40 261 aa14.98□□□□□ -0.01
VDR-204ENST00000547065 PVRIGQ6DKI7 326 aa14.98□□□□□ -0.01
VDR-204ENST00000547065 ZNF343Q6P1L6 599 aa14.98□□□□□ -0.01
VDR-204ENST00000547065 C1orf122Q6ZSJ8 110 aa14.98□□□□□ -0.01
VDR-204ENST00000547065 DPM3Q9P2X0 92 aa14.98□□□□□ -0.01
VDR-204ENST00000547065 NBASA2RRP1 2371 aa14.98□□□□□ -0.01
VDR-204ENST00000547065 PRTN3P24158 256 aa14.98□□□□□ -0.01
VDR-204ENST00000547065 CNTFRP26992 372 aa14.98□□□□□ -0.01
VDR-204ENST00000547065 COMPP49747 757 aaPredicted RBP14.98□□□□□ -0.01
VDR-204ENST00000547065 GNB1P62873 340 aa14.98□□□□□ -0.01
VDR-204ENST00000547065 TNXAQ16473 311 aa14.98□□□□□ -0.01
VDR-204ENST00000547065 ACY3Q96HD9 319 aa14.98□□□□□ -0.01
VDR-204ENST00000547065 TECRQ9NZ01 308 aaKnown RBP14.98□□□□□ -0.01
VDR-204ENST00000547065 METTL1Q9UBP6 276 aaKnown RBP14.98□□□□□ -0.01
VDR-204ENST00000547065 URGCP-MRPS24S4R325 110 aa14.98□□□□□ -0.01
VDR-204ENST00000547065 IGLC7A0M8Q6 106 aa14.97□□□□□ -0.01
VDR-204ENST00000547065 FOXH1O75593 365 aa14.97□□□□□ -0.01
VDR-204ENST00000547065 CXCL1P09341 107 aa14.97□□□□□ -0.01
VDR-204ENST00000547065 CEACAM3P40198 252 aa14.97□□□□□ -0.01
VDR-204ENST00000547065 RPS10P46783 165 aaKnown RBP14.97□□□□□ -0.01
VDR-204ENST00000547065 ETFRF1Q6IPR1 90 aa14.97□□□□□ -0.01
VDR-204ENST00000547065 MIR17HGQ75NE6 70 aa14.97□□□□□ -0.01
VDR-204ENST00000547065 PPP1R27Q86WC6 154 aa14.97□□□□□ -0.01
VDR-204ENST00000547065 ZNF114Q8NC26 417 aa14.97□□□□□ -0.01
VDR-204ENST00000547065 FNDC4Q9H6D8 234 aaPredicted RBP14.97□□□□□ -0.01
VDR-204ENST00000547065 UBTD1Q9HAC8 227 aa14.97□□□□□ -0.01
VDR-204ENST00000547065 DOK5Q9P104 306 aa14.97□□□□□ -0.01
VDR-204ENST00000547065 KLF2Q9Y5W3 355 aaPredicted RBP14.97□□□□□ -0.01
VDR-204ENST00000547065 COL6A6A6NMZ7 2263 aa14.97□□□□□ -0.01
VDR-204ENST00000547065 CHD8Q9HCK8 2581 aa14.97□□□□□ -0.01
VDR-204ENST00000547065 A6NNC1 897 aa14.96□□□□□ -0.01
VDR-204ENST00000547065 OR5G3P0C626 314 aa14.96□□□□□ -0.01
VDR-204ENST00000547065 THAP8Q8NA92 274 aa14.96□□□□□ -0.01
VDR-204ENST00000547065 RNF2Q99496 336 aa14.96□□□□□ -0.01
VDR-204ENST00000547065 TMEM167BQ9NRX6 74 aa14.96□□□□□ -0.01
VDR-204ENST00000547065 ARL2-SNX15V9GYD0 113 aa14.96□□□□□ -0.01
VDR-204ENST00000547065 NDUFB4O95168 129 aa14.96□□□□□ -0.02
VDR-204ENST00000547065 S100A6P06703 90 aa14.96□□□□□ -0.02
VDR-204ENST00000547065 GATA2P23769 480 aaPredicted RBP14.96□□□□□ -0.02
VDR-204ENST00000547065 CDKN1AP38936 164 aa14.96□□□□□ -0.02
VDR-204ENST00000547065 TAS2R45P59539 299 aa14.96□□□□□ -0.02
VDR-204ENST00000547065 OR51G1Q8NGK1 321 aa14.96□□□□□ -0.02
VDR-204ENST00000547065 NPIPB3Q92617 1050 aa14.96□□□□□ -0.02
VDR-204ENST00000547065 TGIF2-C20orf24A0A0A6YYL0 155 aa14.95□□□□□ -0.02
VDR-204ENST00000547065 REG1AP05451 166 aa14.95□□□□□ -0.02
VDR-204ENST00000547065 EFNA4P52798 201 aa14.95□□□□□ -0.02
VDR-204ENST00000547065 PQLC2Q6ZP29 291 aa14.95□□□□□ -0.02
VDR-204ENST00000547065 KIR3DL3Q8N743 410 aa14.95□□□□□ -0.02
VDR-204ENST00000547065 ANAPC16Q96DE5 110 aa14.95□□□□□ -0.02
VDR-204ENST00000547065 YTHDF2Q9Y5A9 579 aaKnown RBP14.95□□□□□ -0.02
VDR-204ENST00000547065 TPRP12270 2363 aaKnown RBP14.94□□□□□ -0.02
VDR-204ENST00000547065 TIMM23O14925 209 aa14.94□□□□□ -0.02
VDR-204ENST00000547065 AREGP15514 252 aa14.94□□□□□ -0.02
VDR-204ENST00000547065 SELENOTP62341 195 aa14.94□□□□□ -0.02
VDR-204ENST00000547065 LDLRAD2Q5SZI1 272 aa14.94□□□□□ -0.02
VDR-204ENST00000547065 C16orf82Q7Z2V1 217 aa14.94□□□□□ -0.02
VDR-204ENST00000547065 MRPL32Q9BYC8 188 aaKnown RBP14.94□□□□□ -0.02
VDR-204ENST00000547065 DNAJC4Q9NNZ3 241 aa14.94□□□□□ -0.02
VDR-204ENST00000547065 TCRBV4S1A1TA0A5B7 111 aa14.93□□□□□ -0.02
VDR-204ENST00000547065 ODF3BA8MYP8 253 aa14.93□□□□□ -0.02
VDR-204ENST00000547065 CRYGCP07315 174 aa14.93□□□□□ -0.02
VDR-204ENST00000547065 SNRPEP62304 92 aaKnown RBP14.93□□□□□ -0.02
VDR-204ENST00000547065 KIAA0141Q14154 515 aaPredicted RBP14.93□□□□□ -0.02
VDR-204ENST00000547065 HCP5Q6MZN7 132 aa14.93□□□□□ -0.02
VDR-204ENST00000547065 OR1P1Q8NH06 330 aa14.93□□□□□ -0.02
VDR-204ENST00000547065 FAM210BQ96KR6 192 aa14.93□□□□□ -0.02
VDR-204ENST00000547065 UHRF2Q96PU4 802 aa14.93□□□□□ -0.02
VDR-204ENST00000547065 FBXL15Q9H469 300 aa14.93□□□□□ -0.02
VDR-204ENST00000547065 TRBV24-1A0A075B6N3 115 aa14.93□□□□□ -0.02
VDR-204ENST00000547065 C5orf52A6NGY3 159 aa14.93□□□□□ -0.02
VDR-204ENST00000547065 H7BYZ3 331 aa14.93□□□□□ -0.02
VDR-204ENST00000547065 CORTO00230 105 aa14.93□□□□□ -0.02
VDR-204ENST00000547065 TGOLN2O43493 480 aa14.93□□□□□ -0.02
VDR-204ENST00000547065 C8orf88P0DMB2 117 aa14.93□□□□□ -0.02
VDR-204ENST00000547065 OR1L4Q8NGR5 311 aa14.93□□□□□ -0.02
VDR-204ENST00000547065 TMEM37Q8WXS4 190 aa14.93□□□□□ -0.02
VDR-204ENST00000547065 SRSF8Q9BRL6 282 aaKnown RBP14.93□□□□□ -0.02
VDR-204ENST00000547065 SLC25A33Q9BSK2 321 aa14.93□□□□□ -0.02
VDR-204ENST00000547065 PSMB11A5LHX3 300 aa14.92□□□□□ -0.02
VDR-204ENST00000547065 TEX22C9J3V5 150 aa14.92□□□□□ -0.02
VDR-204ENST00000547065 C19orf84I3L1E1 186 aa14.92□□□□□ -0.02
VDR-204ENST00000547065 PAX2Q02962 417 aa14.92□□□□□ -0.02
VDR-204ENST00000547065 MISP3Q96FF7 219 aa14.92□□□□□ -0.02
VDR-204ENST00000547065 SSX3Q99909 188 aa14.92□□□□□ -0.02
VDR-204ENST00000547065 IGKV1D-37A0A075B6S9 117 aa14.91□□□□□ -0.02
VDR-204ENST00000547065 NDUFS7O75251 213 aa14.91□□□□□ -0.02
VDR-204ENST00000547065 PFN1P07737 140 aaKnown RBP14.91□□□□□ -0.02
VDR-204ENST00000547065 SSBP2P81877 361 aaPredicted RBP14.91□□□□□ -0.02
VDR-204ENST00000547065 PLGLAQ15195 96 aa14.91□□□□□ -0.02
VDR-204ENST00000547065 LINC01551Q86U37 167 aa14.91□□□□□ -0.02
VDR-204ENST00000547065 C22orf15Q8WYQ4 148 aa14.91□□□□□ -0.02
VDR-204ENST00000547065 CFHR4Q92496 578 aa14.91□□□□□ -0.02
VDR-204ENST00000547065 C11orf52Q96A22 123 aa14.91□□□□□ -0.02
VDR-204ENST00000547065 OR5B12Q96R08 314 aa14.91□□□□□ -0.02
VDR-204ENST00000547065 PFDN5Q99471 154 aa14.91□□□□□ -0.02
VDR-204ENST00000547065 HILPDAQ9Y5L2 63 aa14.91□□□□□ -0.02
VDR-204ENST00000547065 SCO2A0A1W2PP80 73 aa14.9□□□□□ -0.02
VDR-204ENST00000547065 FCN1O00602 326 aa14.9□□□□□ -0.02
VDR-204ENST00000547065 S100PP25815 95 aa14.9□□□□□ -0.02
VDR-204ENST00000547065 MFAP2P55001 183 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms