RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 OR4F5Q8NH21 305 aa12.43□□□□□ -0.42
TRAFD1-203ENST00000547063 NOL4LQ96MY1 436 aaPredicted RBP12.43□□□□□ -0.42
TRAFD1-203ENST00000547063 SLA2Q9H6Q3 261 aa12.43□□□□□ -0.42
TRAFD1-203ENST00000547063 ZNF355PQ9NSJ1 428 aa12.43□□□□□ -0.42
TRAFD1-203ENST00000547063 KLK9Q9UKQ9 250 aa12.43□□□□□ -0.42
TRAFD1-203ENST00000547063 HSPB11Q9Y547 144 aa12.43□□□□□ -0.42
TRAFD1-203ENST00000547063 RNF222A6NCQ9 220 aa12.42□□□□□ -0.42
TRAFD1-203ENST00000547063 CST7O76096 145 aa12.42□□□□□ -0.42
TRAFD1-203ENST00000547063 PPIFP30405 207 aaKnown RBP12.42□□□□□ -0.42
TRAFD1-203ENST00000547063 EIF2B2P49770 351 aaKnown RBP12.42□□□□□ -0.42
TRAFD1-203ENST00000547063 ATP6V1FQ16864 119 aa12.42□□□□□ -0.42
TRAFD1-203ENST00000547063 COMMD1Q8N668 190 aa12.42□□□□□ -0.42
TRAFD1-203ENST00000547063 OR1S2Q8NGQ3 325 aa12.42□□□□□ -0.42
TRAFD1-203ENST00000547063 CACNG8Q8WXS5 425 aa12.42□□□□□ -0.42
TRAFD1-203ENST00000547063 GGACTQ9BVM4 153 aa12.42□□□□□ -0.42
TRAFD1-203ENST00000547063 LINC00527Q9UJ94 153 aa12.42□□□□□ -0.42
TRAFD1-203ENST00000547063 IGLV11-55A0A075B6I3 123 aa12.41□□□□□ -0.42
TRAFD1-203ENST00000547063 PSMB11A5LHX3 300 aa12.41□□□□□ -0.42
TRAFD1-203ENST00000547063 FNDC10F2Z333 226 aa12.41□□□□□ -0.42
TRAFD1-203ENST00000547063 TAAR5O14804 337 aa12.41□□□□□ -0.42
TRAFD1-203ENST00000547063 GPX4P36969 197 aaPredicted RBP12.41□□□□□ -0.42
TRAFD1-203ENST00000547063 OPRK1P41145 380 aa12.41□□□□□ -0.42
TRAFD1-203ENST00000547063 AP2S1P53680 142 aaPredicted RBP12.41□□□□□ -0.42
TRAFD1-203ENST00000547063 DLK1P80370 383 aa12.41□□□□□ -0.42
TRAFD1-203ENST00000547063 NHLH2Q02577 135 aa12.41□□□□□ -0.42
TRAFD1-203ENST00000547063 SLC38A11Q08AI6 406 aa12.41□□□□□ -0.42
TRAFD1-203ENST00000547063 TEX38Q6PEX7 206 aa12.41□□□□□ -0.42
TRAFD1-203ENST00000547063 CENPVQ7Z7K6 275 aaPredicted RBP12.41□□□□□ -0.42
TRAFD1-203ENST00000547063 LILRB2Q8N423 598 aa12.41□□□□□ -0.42
TRAFD1-203ENST00000547063 KCNRGQ8N5I3 272 aa12.41□□□□□ -0.42
TRAFD1-203ENST00000547063 TMEM217Q8N7C4 229 aa12.41□□□□□ -0.42
TRAFD1-203ENST00000547063 NECAP1Q8NC96 275 aa12.41□□□□□ -0.42
TRAFD1-203ENST00000547063 TMEM170AQ8WVE7 144 aa12.41□□□□□ -0.42
TRAFD1-203ENST00000547063 MISP3Q96FF7 219 aa12.41□□□□□ -0.42
TRAFD1-203ENST00000547063 SERTAD4Q9NUC0 356 aa12.41□□□□□ -0.42
TRAFD1-203ENST00000547063 TRBV9A0A0B4J1U6 114 aa12.4□□□□□ -0.42
TRAFD1-203ENST00000547063 A0A1B0GUS0 222 aa12.4□□□□□ -0.42
TRAFD1-203ENST00000547063 FAM223BA6NKX1 122 aa12.4□□□□□ -0.42
TRAFD1-203ENST00000547063 PMS2P5A8MQ11 134 aa12.4□□□□□ -0.42
TRAFD1-203ENST00000547063 BOLA2-SMG1P6H3BVE0 249 aa12.4□□□□□ -0.42
TRAFD1-203ENST00000547063 DFFBO76075 338 aa12.4□□□□□ -0.42
TRAFD1-203ENST00000547063 IGLV1-40P01703 118 aa12.4□□□□□ -0.42
TRAFD1-203ENST00000547063 IGHG4P01861 327 aa12.4□□□□□ -0.42
TRAFD1-203ENST00000547063 CFHR3Q02985 330 aa12.4□□□□□ -0.42
TRAFD1-203ENST00000547063 TMEM95Q3KNT9 176 aa12.4□□□□□ -0.42
TRAFD1-203ENST00000547063 FAM223AQ8IWN6 122 aa12.4□□□□□ -0.42
TRAFD1-203ENST00000547063 OR5C1Q8NGR4 320 aa12.4□□□□□ -0.42
TRAFD1-203ENST00000547063 ARL6Q9H0F7 186 aa12.4□□□□□ -0.42
TRAFD1-203ENST00000547063 KANTRA0A1W2PQU2 76 aa12.39□□□□□ -0.43
TRAFD1-203ENST00000547063 PRSS46E5RG02 174 aa12.39□□□□□ -0.43
TRAFD1-203ENST00000547063 ELANEP08246 267 aa12.39□□□□□ -0.43
TRAFD1-203ENST00000547063 CXCL2P19875 107 aa12.39□□□□□ -0.43
TRAFD1-203ENST00000547063 MFAP2P55001 183 aa12.39□□□□□ -0.43
TRAFD1-203ENST00000547063 CD69Q07108 199 aa12.39□□□□□ -0.43
TRAFD1-203ENST00000547063 FOXE3Q13461 319 aa12.39□□□□□ -0.43
TRAFD1-203ENST00000547063 USMG5Q96IX5 58 aa12.39□□□□□ -0.43
TRAFD1-203ENST00000547063 SLC35E1Q96K37 410 aa12.39□□□□□ -0.43
TRAFD1-203ENST00000547063 CXorf58Q96LI9 332 aa12.39□□□□□ -0.43
TRAFD1-203ENST00000547063 FANCD2OSQ96PS1 177 aa12.39□□□□□ -0.43
TRAFD1-203ENST00000547063 FBXL7Q9UJT9 491 aa12.39□□□□□ -0.43
TRAFD1-203ENST00000547063 A0A0G2JLM5 398 aa12.38□□□□□ -0.43
TRAFD1-203ENST00000547063 SOX15O60248 233 aa12.38□□□□□ -0.43
TRAFD1-203ENST00000547063 MT-CO2P00403 227 aa12.38□□□□□ -0.43
TRAFD1-203ENST00000547063 TRGV3P03979 118 aa12.38□□□□□ -0.43
TRAFD1-203ENST00000547063 PF4V1P10720 104 aa12.38□□□□□ -0.43
TRAFD1-203ENST00000547063 RHOGP84095 191 aa12.38□□□□□ -0.43
TRAFD1-203ENST00000547063 ZNF266Q14584 549 aa12.38□□□□□ -0.43
TRAFD1-203ENST00000547063 LGALSLQ3ZCW2 172 aaPredicted RBP12.38□□□□□ -0.43
TRAFD1-203ENST00000547063 FAM209BQ5JX69 171 aa12.38□□□□□ -0.43
TRAFD1-203ENST00000547063 TMUB2Q71RG4 321 aa12.38□□□□□ -0.43
TRAFD1-203ENST00000547063 SLC16A13Q7RTY0 426 aa12.38□□□□□ -0.43
TRAFD1-203ENST00000547063 C9orf62Q8N4C0 152 aa12.38□□□□□ -0.43
TRAFD1-203ENST00000547063 LINC01006Q8NI28 216 aa12.38□□□□□ -0.43
TRAFD1-203ENST00000547063 VN1R17PQ8TDU5 208 aa12.38□□□□□ -0.43
TRAFD1-203ENST00000547063 ATP5SQ99766 215 aa12.38□□□□□ -0.43
TRAFD1-203ENST00000547063 ARPC5LQ9BPX5 153 aa12.38□□□□□ -0.43
TRAFD1-203ENST00000547063 TMEM147Q9BVK8 224 aa12.38□□□□□ -0.43
TRAFD1-203ENST00000547063 UQCC1Q9NVA1 299 aa12.38□□□□□ -0.43
TRAFD1-203ENST00000547063 FBXL17Q9UF56 701 aa12.38□□□□□ -0.43
TRAFD1-203ENST00000547063 BORCS7-ASMTA0A0B4J1R7 106 aa12.37□□□□□ -0.43
TRAFD1-203ENST00000547063 SCGB2A1O75556 95 aa12.37□□□□□ -0.43
TRAFD1-203ENST00000547063 OR2J3O76001 311 aa12.37□□□□□ -0.43
TRAFD1-203ENST00000547063 IFNA5P01569 189 aa12.37□□□□□ -0.43
TRAFD1-203ENST00000547063 PRH1P02810 166 aa12.37□□□□□ -0.43
TRAFD1-203ENST00000547063 NKX2-5P52952 324 aaPredicted RBP12.37□□□□□ -0.43
TRAFD1-203ENST00000547063 TPPP2P59282 170 aa12.37□□□□□ -0.43
TRAFD1-203ENST00000547063 EIF5AP63241 154 aaKnown RBP12.37□□□□□ -0.43
TRAFD1-203ENST00000547063 ATP5G2Q06055 141 aa12.37□□□□□ -0.43
TRAFD1-203ENST00000547063 ARL16Q0P5N6 197 aa12.37□□□□□ -0.43
TRAFD1-203ENST00000547063 CLINT1Q14677 625 aa12.37□□□□□ -0.43
TRAFD1-203ENST00000547063 C19orf35Q6ZS72 473 aa12.37□□□□□ -0.43
TRAFD1-203ENST00000547063 HAPLN4Q86UW8 402 aa12.37□□□□□ -0.43
TRAFD1-203ENST00000547063 KLHDC1Q8N7A1 406 aa12.37□□□□□ -0.43
TRAFD1-203ENST00000547063 OR4X2Q8NGF9 303 aa12.37□□□□□ -0.43
TRAFD1-203ENST00000547063 MS4A10Q96PG2 267 aa12.37□□□□□ -0.43
TRAFD1-203ENST00000547063 ATP6V0BQ99437 205 aa12.37□□□□□ -0.43
TRAFD1-203ENST00000547063 NPVFQ9HCQ7 196 aa12.37□□□□□ -0.43
TRAFD1-203ENST00000547063 GAR1Q9NY12 217 aaKnown RBP12.37□□□□□ -0.43
TRAFD1-203ENST00000547063 DMRT1Q9Y5R6 373 aa12.37□□□□□ -0.43
TRAFD1-203ENST00000547063 CLPSL1A2RUU4 121 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms