RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 MFAP4P55083 255 aa9.14□□□□□ -0.95
SCAF11-208ENST00000546534 RPL11P62913 178 aaKnown RBP9.14□□□□□ -0.95
SCAF11-208ENST00000546534 CATR1Q13166 79 aa9.14□□□□□ -0.95
SCAF11-208ENST00000546534 MORN3Q6PF18 240 aaPredicted RBP9.14□□□□□ -0.95
SCAF11-208ENST00000546534 Q6ZRM9 215 aa9.14□□□□□ -0.95
SCAF11-208ENST00000546534 ZBTB34Q8NCN2 500 aa9.14□□□□□ -0.95
SCAF11-208ENST00000546534 CSNK1G2-AS1Q8NCQ2 148 aa9.14□□□□□ -0.95
SCAF11-208ENST00000546534 DUSP18Q8NEJ0 188 aa9.14□□□□□ -0.95
SCAF11-208ENST00000546534 OR13F1Q8NGS4 319 aa9.14□□□□□ -0.95
SCAF11-208ENST00000546534 OR51H1Q8NH63 302 aa9.14□□□□□ -0.95
SCAF11-208ENST00000546534 SLC25A46Q96AG3 418 aa9.14□□□□□ -0.95
SCAF11-208ENST00000546534 ACOT13Q9NPJ3 140 aa9.14□□□□□ -0.95
SCAF11-208ENST00000546534 RABAC1Q9UI14 185 aa9.14□□□□□ -0.95
SCAF11-208ENST00000546534 NSG2Q9Y328 171 aa9.14□□□□□ -0.95
SCAF11-208ENST00000546534 TRAV1-2A0A0B4J238 106 aa9.13□□□□□ -0.95
SCAF11-208ENST00000546534 KNCNA6PVL3 124 aa9.13□□□□□ -0.95
SCAF11-208ENST00000546534 C16orf90A8MZG2 172 aa9.13□□□□□ -0.95
SCAF11-208ENST00000546534 IGHV3-48P01763 117 aa9.13□□□□□ -0.95
SCAF11-208ENST00000546534 EIF4EP06730 217 aaKnown RBP9.13□□□□□ -0.95
SCAF11-208ENST00000546534 GNG2P59768 71 aa9.13□□□□□ -0.95
SCAF11-208ENST00000546534 MLLT11Q13015 90 aaPredicted RBP9.13□□□□□ -0.95
SCAF11-208ENST00000546534 C1orf134Q5TEV5 83 aa9.13□□□□□ -0.95
SCAF11-208ENST00000546534 TOMM20LQ6UXN7 152 aa9.13□□□□□ -0.95
SCAF11-208ENST00000546534 UBE2DNLQ8IWF7 75 aa9.13□□□□□ -0.95
SCAF11-208ENST00000546534 TXN2Q99757 166 aa9.13□□□□□ -0.95
SCAF11-208ENST00000546534 GINS3Q9BRX5 216 aa9.13□□□□□ -0.95
SCAF11-208ENST00000546534 SLC5A7Q9GZV3 580 aa9.13□□□□□ -0.95
SCAF11-208ENST00000546534 TMEM14BQ9NUH8 114 aa9.13□□□□□ -0.95
SCAF11-208ENST00000546534 COMMD9Q9P000 198 aa9.13□□□□□ -0.95
SCAF11-208ENST00000546534 OR51B2Q9Y5P1 312 aa9.13□□□□□ -0.95
SCAF11-208ENST00000546534 MARCH11A6NNE9 402 aa9.12□□□□□ -0.95
SCAF11-208ENST00000546534 I3L2K1 104 aa9.12□□□□□ -0.95
SCAF11-208ENST00000546534 PPYP01298 95 aa9.12□□□□□ -0.95
SCAF11-208ENST00000546534 NPY1RP25929 384 aa9.12□□□□□ -0.95
SCAF11-208ENST00000546534 ARPC4P59998 168 aa9.12□□□□□ -0.95
SCAF11-208ENST00000546534 AADACL3Q5VUY0 350 aa9.12□□□□□ -0.95
SCAF11-208ENST00000546534 UBE2UQ5VVX9 321 aa9.12□□□□□ -0.95
SCAF11-208ENST00000546534 ZNF818PQ6ZRF7 136 aa9.12□□□□□ -0.95
SCAF11-208ENST00000546534 Q8N1X5 172 aa9.12□□□□□ -0.95
SCAF11-208ENST00000546534 OR1P1Q8NH06 330 aa9.12□□□□□ -0.95
SCAF11-208ENST00000546534 SCN3BQ9NY72 215 aa9.12□□□□□ -0.95
SCAF11-208ENST00000546534 AGRNO00468 2067 aa9.11□□□□□ -0.95
SCAF11-208ENST00000546534 K7EQG2 157 aa9.11□□□□□ -0.95
SCAF11-208ENST00000546534 RAB3BP20337 219 aa9.11□□□□□ -0.95
SCAF11-208ENST00000546534 FXYD4P59646 89 aa9.11□□□□□ -0.95
SCAF11-208ENST00000546534 ERVK-16P61578 105 aa9.11□□□□□ -0.95
SCAF11-208ENST00000546534 RCN1Q15293 331 aa9.11□□□□□ -0.95
SCAF11-208ENST00000546534 ACTL10Q5JWF8 245 aa9.11□□□□□ -0.95
SCAF11-208ENST00000546534 BEST4Q8NFU0 473 aa9.11□□□□□ -0.95
SCAF11-208ENST00000546534 TMEM56Q96MV1 263 aa9.11□□□□□ -0.95
SCAF11-208ENST00000546534 MGLLQ99685 303 aa9.11□□□□□ -0.95
SCAF11-208ENST00000546534 HERC1Q15751 4861 aa9.1□□□□□ -0.95
SCAF11-208ENST00000546534 SMIM30A4D0T7 59 aa9.1□□□□□ -0.95
SCAF11-208ENST00000546534 DBX1A6NMT0 343 aa9.1□□□□□ -0.95
SCAF11-208ENST00000546534 GNG7O60262 68 aa9.1□□□□□ -0.95
SCAF11-208ENST00000546534 SNAPC5O75971 98 aa9.1□□□□□ -0.95
SCAF11-208ENST00000546534 MT-CO2P00403 227 aa9.1□□□□□ -0.95
SCAF11-208ENST00000546534 KRASP01116 189 aa9.1□□□□□ -0.95
SCAF11-208ENST00000546534 ZNF688P0C7X2 276 aa9.1□□□□□ -0.95
SCAF11-208ENST00000546534 MYL9P24844 172 aa9.1□□□□□ -0.95
SCAF11-208ENST00000546534 STXBP6Q8NFX7 210 aa9.1□□□□□ -0.95
SCAF11-208ENST00000546534 GRAMD2BQ96HH9 432 aa9.1□□□□□ -0.95
SCAF11-208ENST00000546534 CCDC90BQ9GZT6 254 aa9.1□□□□□ -0.95
SCAF11-208ENST00000546534 PUS1Q9Y606 427 aaKnown RBP eCLIP9.1□□□□□ -0.95
SCAF11-208ENST00000546534 CASQ2O14958 399 aaPredicted RBP9.09□□□□□ -0.95
SCAF11-208ENST00000546534 G6PCP35575 357 aa9.09□□□□□ -0.95
SCAF11-208ENST00000546534 LPAR6P43657 344 aa9.09□□□□□ -0.95
SCAF11-208ENST00000546534 RNF212Q495C1 297 aa9.09□□□□□ -0.95
SCAF11-208ENST00000546534 TMEM17Q86X19 198 aa9.09□□□□□ -0.95
SCAF11-208ENST00000546534 PINX1Q96BK5 328 aaKnown RBP9.09□□□□□ -0.95
SCAF11-208ENST00000546534 DUSP21Q9H596 190 aa9.09□□□□□ -0.95
SCAF11-208ENST00000546534 SCRT2Q9NQ03 307 aa9.09□□□□□ -0.95
SCAF11-208ENST00000546534 PRNDQ9UKY0 176 aa9.09□□□□□ -0.95
SCAF11-208ENST00000546534 A0A1B0GU03 582 aa9.08□□□□□ -0.96
SCAF11-208ENST00000546534 RGS10O43665 173 aa9.08□□□□□ -0.96
SCAF11-208ENST00000546534 FCER2P06734 321 aa9.08□□□□□ -0.96
SCAF11-208ENST00000546534 F2RP25116 425 aa9.08□□□□□ -0.96
SCAF11-208ENST00000546534 GNRHRP30968 328 aa9.08□□□□□ -0.96
SCAF11-208ENST00000546534 HOGA1Q86XE5 327 aa9.08□□□□□ -0.96
SCAF11-208ENST00000546534 CADM3Q8N126 398 aa9.08□□□□□ -0.96
SCAF11-208ENST00000546534 FCAMRQ8WWV6 532 aa9.08□□□□□ -0.96
SCAF11-208ENST00000546534 FAM210BQ96KR6 192 aa9.08□□□□□ -0.96
SCAF11-208ENST00000546534 TMEM231Q9H6L2 316 aa9.08□□□□□ -0.96
SCAF11-208ENST00000546534 XCL2Q9UBD3 114 aa9.08□□□□□ -0.96
SCAF11-208ENST00000546534 TPRKBQ9Y3C4 175 aa9.08□□□□□ -0.96
SCAF11-208ENST00000546534 PGLYRP1O75594 196 aaPredicted RBP9.07□□□□□ -0.96
SCAF11-208ENST00000546534 SCGNO76038 276 aa9.07□□□□□ -0.96
SCAF11-208ENST00000546534 RLN1P04808 185 aa9.07□□□□□ -0.96
SCAF11-208ENST00000546534 NPPCP23582 126 aa9.07□□□□□ -0.96
SCAF11-208ENST00000546534 OGFRL1Q5TC84 451 aaPredicted RBP9.07□□□□□ -0.96
SCAF11-208ENST00000546534 ZNF600Q6ZNG1 722 aa9.07□□□□□ -0.96
SCAF11-208ENST00000546534 TPRA1Q86W33 373 aa9.07□□□□□ -0.96
SCAF11-208ENST00000546534 DCANP1Q8TF63 244 aa9.07□□□□□ -0.96
SCAF11-208ENST00000546534 MOB3AQ96BX8 217 aa9.07□□□□□ -0.96
SCAF11-208ENST00000546534 RAB40CQ96S21 281 aa9.07□□□□□ -0.96
SCAF11-208ENST00000546534 FKBP11Q9NYL4 201 aa9.07□□□□□ -0.96
SCAF11-208ENST00000546534 LRP1BQ9NZR2 4599 aa9.06□□□□□ -0.96
SCAF11-208ENST00000546534 A0A1W2PS18 150 aa9.06□□□□□ -0.96
SCAF11-208ENST00000546534 SPART-AS1P0CW21 52 aa9.06□□□□□ -0.96
SCAF11-208ENST00000546534 NPBWR1P48145 328 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms