RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 MGST1P10620 155 aaKnown RBP7.14□□□□□ -1.27
TDP1-204ENST00000545686 GATA4P43694 442 aa7.14□□□□□ -1.27
TDP1-204ENST00000545686 TCL1AP56279 114 aa7.14□□□□□ -1.27
TDP1-204ENST00000545686 CD69Q07108 199 aa7.14□□□□□ -1.27
TDP1-204ENST00000545686 KLF5Q13887 457 aaPredicted RBP7.14□□□□□ -1.27
TDP1-204ENST00000545686 KIAA1644Q3SXP7 199 aa7.14□□□□□ -1.27
TDP1-204ENST00000545686 MRPL54Q6P161 138 aaKnown RBP7.14□□□□□ -1.27
TDP1-204ENST00000545686 BHLHA15Q7RTS1 189 aaPredicted RBP7.14□□□□□ -1.27
TDP1-204ENST00000545686 C18orf32Q8TCD1 76 aa7.14□□□□□ -1.27
TDP1-204ENST00000545686 OR2V2Q96R30 315 aa7.14□□□□□ -1.27
TDP1-204ENST00000545686 TXN2Q99757 166 aa7.14□□□□□ -1.27
TDP1-204ENST00000545686 GCM1Q9NP62 436 aa7.14□□□□□ -1.27
TDP1-204ENST00000545686 DKK4Q9UBT3 224 aa7.14□□□□□ -1.27
TDP1-204ENST00000545686 MRPS16Q9Y3D3 137 aaKnown RBP7.14□□□□□ -1.27
TDP1-204ENST00000545686 TEX50A0A1B0GTY4 177 aa7.13□□□□□ -1.27
TDP1-204ENST00000545686 TM4SF5O14894 197 aa7.13□□□□□ -1.27
TDP1-204ENST00000545686 SPINK4O60575 86 aa7.13□□□□□ -1.27
TDP1-204ENST00000545686 OR2J3O76001 311 aa7.13□□□□□ -1.27
TDP1-204ENST00000545686 UBE2L3P68036 154 aaKnown RBP7.13□□□□□ -1.27
TDP1-204ENST00000545686 Q6ZN92 141 aa7.13□□□□□ -1.27
TDP1-204ENST00000545686 ATP5L2Q7Z4Y8 100 aa7.13□□□□□ -1.27
TDP1-204ENST00000545686 MOGAT3Q86VF5 341 aa7.13□□□□□ -1.27
TDP1-204ENST00000545686 LEAP2Q969E1 77 aa7.13□□□□□ -1.27
TDP1-204ENST00000545686 SARAFQ96BY9 339 aa7.13□□□□□ -1.27
TDP1-204ENST00000545686 FAM167A-AS1Q96KT0 104 aa7.13□□□□□ -1.27
TDP1-204ENST00000545686 SLC25A2Q9BXI2 301 aa7.13□□□□□ -1.27
TDP1-204ENST00000545686 SAP30LQ9HAJ7 183 aa7.13□□□□□ -1.27
TDP1-204ENST00000545686 ZNF71Q9NQZ8 489 aaPredicted RBP7.13□□□□□ -1.27
TDP1-204ENST00000545686 LAMTOR2Q9Y2Q5 125 aa7.13□□□□□ -1.27
TDP1-204ENST00000545686 SLC25A15Q9Y619 301 aa7.13□□□□□ -1.27
TDP1-204ENST00000545686 DMDP11532 3685 aa7.13□□□□□ -1.27
TDP1-204ENST00000545686 DLL1O00548 723 aa7.13□□□□□ -1.27
TDP1-204ENST00000545686 MYOD1P15172 320 aa7.13□□□□□ -1.27
TDP1-204ENST00000545686 LPAL2Q16609 132 aa7.13□□□□□ -1.27
TDP1-204ENST00000545686 C3orf36Q3SXR2 165 aa7.13□□□□□ -1.27
TDP1-204ENST00000545686 STUMQ69YW2 141 aa7.13□□□□□ -1.27
TDP1-204ENST00000545686 CYB5R2Q6BCY4 276 aa7.13□□□□□ -1.27
TDP1-204ENST00000545686 SLC25A48Q6ZT89 311 aaKnown RBP7.13□□□□□ -1.27
TDP1-204ENST00000545686 ORAOV1Q8WV07 137 aa7.13□□□□□ -1.27
TDP1-204ENST00000545686 SMIM12Q96EX1 92 aa7.13□□□□□ -1.27
TDP1-204ENST00000545686 GRAMD2BQ96HH9 432 aa7.13□□□□□ -1.27
TDP1-204ENST00000545686 SERTAD4Q9NUC0 356 aa7.13□□□□□ -1.27
TDP1-204ENST00000545686 SIAH2O43255 324 aa7.12□□□□□ -1.27
TDP1-204ENST00000545686 CD59P13987 128 aa7.12□□□□□ -1.27
TDP1-204ENST00000545686 KLF3P57682 345 aaPredicted RBP7.12□□□□□ -1.27
TDP1-204ENST00000545686 SLC35B1P78383 322 aa7.12□□□□□ -1.27
TDP1-204ENST00000545686 SLAQ13239 276 aa7.12□□□□□ -1.27
TDP1-204ENST00000545686 MMDQ15546 238 aa7.12□□□□□ -1.27
TDP1-204ENST00000545686 UTF1Q5T230 341 aa7.12□□□□□ -1.27
TDP1-204ENST00000545686 C11orf42Q8N5U0 333 aa7.12□□□□□ -1.27
TDP1-204ENST00000545686 OR1L4Q8NGR5 311 aa7.12□□□□□ -1.27
TDP1-204ENST00000545686 OR9G1Q8NH87 305 aa7.12□□□□□ -1.27
TDP1-204ENST00000545686 OSR1Q8TAX0 266 aaPredicted RBP7.12□□□□□ -1.27
TDP1-204ENST00000545686 ARRDC1-AS1Q9H2J1 176 aa7.12□□□□□ -1.27
TDP1-204ENST00000545686 DNAJC4Q9NNZ3 241 aa7.12□□□□□ -1.27
TDP1-204ENST00000545686 PROCRQ9UNN8 238 aa7.12□□□□□ -1.27
TDP1-204ENST00000545686 CT45A6P0DMU7 189 aa7.12□□□□□ -1.27
TDP1-204ENST00000545686 CT45A5P0DMU8 189 aa7.12□□□□□ -1.27
TDP1-204ENST00000545686 CT45A7P0DMV0 189 aa7.12□□□□□ -1.27
TDP1-204ENST00000545686 GLRXP35754 106 aa7.12□□□□□ -1.27
TDP1-204ENST00000545686 BPIFB3P59826 476 aa7.12□□□□□ -1.27
TDP1-204ENST00000545686 TBR1Q16650 682 aa7.12□□□□□ -1.27
TDP1-204ENST00000545686 MSMPQ1L6U9 139 aa7.12□□□□□ -1.27
TDP1-204ENST00000545686 FAM162BQ5T6X4 162 aa7.12□□□□□ -1.27
TDP1-204ENST00000545686 ATP1A1-AS1Q5TC04 95 aa7.12□□□□□ -1.27
TDP1-204ENST00000545686 MOB3BQ86TA1 216 aa7.12□□□□□ -1.27
TDP1-204ENST00000545686 SPACA3Q8IXA5 215 aa7.12□□□□□ -1.27
TDP1-204ENST00000545686 FAM122AQ96E09 287 aa7.12□□□□□ -1.27
TDP1-204ENST00000545686 RPUSD1Q9UJJ7 312 aaKnown RBP7.12□□□□□ -1.27
TDP1-204ENST00000545686 AMMECR1Q9Y4X0 333 aaPredicted RBP7.12□□□□□ -1.27
TDP1-204ENST00000545686 TRIOBPQ9H2D6 2365 aa7.12□□□□□ -1.27
TDP1-204ENST00000545686 IGLV3-9A0A075B6K5 115 aa7.11□□□□□ -1.27
TDP1-204ENST00000545686 PEX7O00628 323 aa7.11□□□□□ -1.27
TDP1-204ENST00000545686 HSBP1O75506 76 aa7.11□□□□□ -1.27
TDP1-204ENST00000545686 SAA1P0DJI8 122 aaPredicted RBP7.11□□□□□ -1.27
TDP1-204ENST00000545686 HIST1H1EP10412 219 aaKnown RBP7.11□□□□□ -1.27
TDP1-204ENST00000545686 GATA2P23769 480 aaPredicted RBP7.11□□□□□ -1.27
TDP1-204ENST00000545686 COL8A2P25067 703 aa7.11□□□□□ -1.27
TDP1-204ENST00000545686 TSPOP30536 169 aa7.11□□□□□ -1.27
TDP1-204ENST00000545686 TFPI2P48307 235 aa7.11□□□□□ -1.27
TDP1-204ENST00000545686 ERHP84090 104 aaKnown RBP7.11□□□□□ -1.27
TDP1-204ENST00000545686 ZNF833PQ6ZTB9 187 aa7.11□□□□□ -1.27
TDP1-204ENST00000545686 STPG4Q8N801 248 aa7.11□□□□□ -1.27
TDP1-204ENST00000545686 OR8B3Q8NGG8 313 aa7.11□□□□□ -1.27
TDP1-204ENST00000545686 ITLN1Q8WWA0 313 aa7.11□□□□□ -1.27
TDP1-204ENST00000545686 OR8B2Q96RD0 313 aa7.11□□□□□ -1.27
TDP1-204ENST00000545686 NDUFA4L2Q9NRX3 87 aa7.11□□□□□ -1.27
TDP1-204ENST00000545686 RNF7Q9UBF6 113 aa7.11□□□□□ -1.27
TDP1-204ENST00000545686 CELSR3Q9NYQ7 3312 aa7.11□□□□□ -1.27
TDP1-204ENST00000545686 TRAV9-2A0A087WT02 112 aa7.11□□□□□ -1.27
TDP1-204ENST00000545686 IGHV2-26A0A0B4J1V2 119 aa7.11□□□□□ -1.27
TDP1-204ENST00000545686 A0A1W2PN81 502 aa7.11□□□□□ -1.27
TDP1-204ENST00000545686 FAM181BA6NEQ2 426 aa7.11□□□□□ -1.27
TDP1-204ENST00000545686 COX7A2P2O60397 106 aa7.11□□□□□ -1.27
TDP1-204ENST00000545686 APOA2P02652 100 aa7.11□□□□□ -1.27
TDP1-204ENST00000545686 IGKV1-16P04430 117 aa7.11□□□□□ -1.27
TDP1-204ENST00000545686 NTF3P20783 257 aa7.11□□□□□ -1.27
TDP1-204ENST00000545686 MFAP2P55001 183 aa7.11□□□□□ -1.27
TDP1-204ENST00000545686 DMRTA1Q5VZB9 504 aa7.11□□□□□ -1.27
TDP1-204ENST00000545686 IGFL2Q6UWQ7 119 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms