RNA–Protein interactions for RNA: ENST00000545595.6

CACNA2D4-217, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 1 (best)

Gene CACNA2D4, Length 1,615 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-217ENST00000545595 SLC25A22Q9H936 323 aa12.5□□□□□ -0.41
CACNA2D4-217ENST00000545595 CARHSP1Q9Y2V2 147 aaKnown RBP12.5□□□□□ -0.41
CACNA2D4-217ENST00000545595 PXMP4Q9Y6I8 212 aa12.5□□□□□ -0.41
CACNA2D4-217ENST00000545595 IGKV1OR2-108A0A075B7D4 117 aa12.49□□□□□ -0.41
CACNA2D4-217ENST00000545595 GATA3P23771 443 aa12.49□□□□□ -0.41
CACNA2D4-217ENST00000545595 MFAP2P55001 183 aa12.49□□□□□ -0.41
CACNA2D4-217ENST00000545595 FGF8P55075 233 aaPredicted RBP12.49□□□□□ -0.41
CACNA2D4-217ENST00000545595 LOXL1Q08397 574 aaPredicted RBP12.49□□□□□ -0.41
CACNA2D4-217ENST00000545595 SRSF8Q9BRL6 282 aaKnown RBP12.49□□□□□ -0.41
CACNA2D4-217ENST00000545595 SEC11CQ9BY50 192 aa12.49□□□□□ -0.41
CACNA2D4-217ENST00000545595 ABCA12Q86UK0 2595 aa12.49□□□□□ -0.41
CACNA2D4-217ENST00000545595 APCP25054 2843 aa12.49□□□□□ -0.41
CACNA2D4-217ENST00000545595 NAV2Q8IVL1 2488 aa12.49□□□□□ -0.41
CACNA2D4-217ENST00000545595 IGHV1-69DA0A0B4J2H0 117 aa12.48□□□□□ -0.41
CACNA2D4-217ENST00000545595 RBFOX3A6NFN3 312 aa12.48□□□□□ -0.41
CACNA2D4-217ENST00000545595 SEC14L6B5MCN3 397 aa12.48□□□□□ -0.41
CACNA2D4-217ENST00000545595 F8W036 122 aa12.48□□□□□ -0.41
CACNA2D4-217ENST00000545595 SCO1O75880 301 aa12.48□□□□□ -0.41
CACNA2D4-217ENST00000545595 IGHV1-69P01742 117 aa12.48□□□□□ -0.41
CACNA2D4-217ENST00000545595 TMEM11P17152 192 aa12.48□□□□□ -0.41
CACNA2D4-217ENST00000545595 RPL29P47914 159 aaKnown RBP12.48□□□□□ -0.41
CACNA2D4-217ENST00000545595 GCSAMLQ5JQS6 135 aa12.48□□□□□ -0.41
CACNA2D4-217ENST00000545595 FAM122CQ6P4D5 195 aa12.48□□□□□ -0.41
CACNA2D4-217ENST00000545595 SSMEM1Q8WWF3 244 aa12.48□□□□□ -0.41
CACNA2D4-217ENST00000545595 SLC35E1Q96K37 410 aa12.48□□□□□ -0.41
CACNA2D4-217ENST00000545595 RARRES2Q99969 163 aa12.48□□□□□ -0.41
CACNA2D4-217ENST00000545595 ACTR3CQ9C0K3 210 aaPredicted RBP12.48□□□□□ -0.41
CACNA2D4-217ENST00000545595 SLC39A9Q9NUM3 307 aa12.48□□□□□ -0.41
CACNA2D4-217ENST00000545595 VPS13CQ709C8 3753 aa12.48□□□□□ -0.41
CACNA2D4-217ENST00000545595 POLQO75417 2590 aa12.48□□□□□ -0.41
CACNA2D4-217ENST00000545595 TRAV20A0A0B4J274 112 aa12.48□□□□□ -0.41
CACNA2D4-217ENST00000545595 TRAV40A0A0B4J280 105 aa12.48□□□□□ -0.41
CACNA2D4-217ENST00000545595 EIF3GO75821 320 aaKnown RBP eCLIP12.48□□□□□ -0.41
CACNA2D4-217ENST00000545595 APELAP0DMC3 54 aa12.48□□□□□ -0.41
CACNA2D4-217ENST00000545595 DEFA4P12838 97 aa12.48□□□□□ -0.41
CACNA2D4-217ENST00000545595 BRS3P32247 399 aa12.48□□□□□ -0.41
CACNA2D4-217ENST00000545595 B2MP61769 119 aa12.48□□□□□ -0.41
CACNA2D4-217ENST00000545595 PRR20EP86478 221 aa12.48□□□□□ -0.41
CACNA2D4-217ENST00000545595 PRR20CP86479 221 aa12.48□□□□□ -0.41
CACNA2D4-217ENST00000545595 PRR20DP86480 221 aa12.48□□□□□ -0.41
CACNA2D4-217ENST00000545595 PRR20BP86481 221 aa12.48□□□□□ -0.41
CACNA2D4-217ENST00000545595 PRR20AP86496 221 aa12.48□□□□□ -0.41
CACNA2D4-217ENST00000545595 RAB31Q13636 194 aa12.48□□□□□ -0.41
CACNA2D4-217ENST00000545595 ZNF506Q5JVG8 444 aa12.48□□□□□ -0.41
CACNA2D4-217ENST00000545595 FAM120AOSQ5T036 256 aa12.48□□□□□ -0.41
CACNA2D4-217ENST00000545595 RUSC1-AS1Q66K80 236 aa12.48□□□□□ -0.41
CACNA2D4-217ENST00000545595 C19orf35Q6ZS72 473 aa12.48□□□□□ -0.41
CACNA2D4-217ENST00000545595 STPG3Q8N7X2 389 aa12.48□□□□□ -0.41
CACNA2D4-217ENST00000545595 OR1P1Q8NH06 330 aa12.48□□□□□ -0.41
CACNA2D4-217ENST00000545595 SLC45A2Q9UMX9 530 aa12.48□□□□□ -0.41
CACNA2D4-217ENST00000545595 F11RQ9Y624 299 aaKnown RBP12.48□□□□□ -0.41
CACNA2D4-217ENST00000545595 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.47□□□□□ -0.416e-7■■■■■ 34.9
CACNA2D4-217ENST00000545595 CSMD2Q7Z408 3487 aa12.47□□□□□ -0.41
CACNA2D4-217ENST00000545595 CNIH1O95406 144 aa12.47□□□□□ -0.41
CACNA2D4-217ENST00000545595 CDC34P49427 236 aaPredicted RBP12.47□□□□□ -0.41
CACNA2D4-217ENST00000545595 PPT1P50897 306 aa12.47□□□□□ -0.41
CACNA2D4-217ENST00000545595 ICAM4Q14773 271 aa12.47□□□□□ -0.41
CACNA2D4-217ENST00000545595 HAGHQ16775 308 aa12.47□□□□□ -0.41
CACNA2D4-217ENST00000545595 OR2T6Q8NHC8 308 aa12.47□□□□□ -0.41
CACNA2D4-217ENST00000545595 RAB24Q969Q5 203 aa12.47□□□□□ -0.41
CACNA2D4-217ENST00000545595 SMDT1Q9H4I9 107 aa12.47□□□□□ -0.41
CACNA2D4-217ENST00000545595 IGHV3OR16-10A0A075B7F0 116 aa12.46□□□□□ -0.41
CACNA2D4-217ENST00000545595 LOC102723971A0A1B0GUV8 181 aa12.46□□□□□ -0.41
CACNA2D4-217ENST00000545595 NCBP2LA6PVI3 153 aaKnown RBP12.46□□□□□ -0.41
CACNA2D4-217ENST00000545595 CYB5BO43169 146 aa12.46□□□□□ -0.41
CACNA2D4-217ENST00000545595 CRYGCP07315 174 aa12.46□□□□□ -0.41
CACNA2D4-217ENST00000545595 LINC00869P0C866 280 aa12.46□□□□□ -0.41
CACNA2D4-217ENST00000545595 FAM106CPP0CH98 169 aa12.46□□□□□ -0.41
CACNA2D4-217ENST00000545595 FXYD3Q14802 87 aa12.46□□□□□ -0.41
CACNA2D4-217ENST00000545595 Q5PR19 223 aa12.46□□□□□ -0.41
CACNA2D4-217ENST00000545595 GNG13Q9P2W3 67 aa12.46□□□□□ -0.41
CACNA2D4-217ENST00000545595 DMRT1Q9Y5R6 373 aa12.46□□□□□ -0.41
CACNA2D4-217ENST00000545595 HMGB3O15347 200 aaKnown RBP12.45□□□□□ -0.42
CACNA2D4-217ENST00000545595 OR10J1P30954 320 aa12.45□□□□□ -0.42
CACNA2D4-217ENST00000545595 DEFA5Q01523 94 aa12.45□□□□□ -0.42
CACNA2D4-217ENST00000545595 PMS2P11Q13670 270 aa12.45□□□□□ -0.42
CACNA2D4-217ENST00000545595 GUCA2BQ16661 112 aa12.45□□□□□ -0.42
CACNA2D4-217ENST00000545595 HIST2H2BCQ6DN03 193 aa12.45□□□□□ -0.42
CACNA2D4-217ENST00000545595 ATRAIDQ6UW56 229 aa12.45□□□□□ -0.42
CACNA2D4-217ENST00000545595 KRTAP1-3Q8IUG1 177 aa12.45□□□□□ -0.42
CACNA2D4-217ENST00000545595 Q8N9W7 124 aa12.45□□□□□ -0.42
CACNA2D4-217ENST00000545595 LINC01356Q8N9X3 169 aa12.45□□□□□ -0.42
CACNA2D4-217ENST00000545595 ABHD5Q8WTS1 349 aa12.45□□□□□ -0.42
CACNA2D4-217ENST00000545595 MISP3Q96FF7 219 aa12.45□□□□□ -0.42
CACNA2D4-217ENST00000545595 ACY3Q96HD9 319 aa12.45□□□□□ -0.42
CACNA2D4-217ENST00000545595 HIF1ANQ9NWT6 349 aa12.45□□□□□ -0.42
CACNA2D4-217ENST00000545595 MRPL36Q9P0J6 103 aaKnown RBP12.45□□□□□ -0.42
CACNA2D4-217ENST00000545595 CR1P17927 2039 aa12.45□□□□□ -0.42
CACNA2D4-217ENST00000545595 CORTO00230 105 aa12.44□□□□□ -0.42
CACNA2D4-217ENST00000545595 IGHV4-38-2P0DP08 117 aa12.44□□□□□ -0.42
CACNA2D4-217ENST00000545595 BCL2P10415 239 aa12.44□□□□□ -0.42
CACNA2D4-217ENST00000545595 CTRB1P17538 263 aa12.44□□□□□ -0.42
CACNA2D4-217ENST00000545595 CX3CL1P78423 397 aa12.44□□□□□ -0.42
CACNA2D4-217ENST00000545595 NDPQ00604 133 aa12.44□□□□□ -0.42
CACNA2D4-217ENST00000545595 KHDC3LQ587J8 217 aa12.44□□□□□ -0.42
CACNA2D4-217ENST00000545595 CTRB2Q6GPI1 263 aa12.44□□□□□ -0.42
CACNA2D4-217ENST00000545595 ETFRF1Q6IPR1 90 aa12.44□□□□□ -0.42
CACNA2D4-217ENST00000545595 ZNF562Q6V9R5 426 aa12.44□□□□□ -0.42
CACNA2D4-217ENST00000545595 BRD3OSQ6XYD6 125 aa12.44□□□□□ -0.42
CACNA2D4-217ENST00000545595 THAP8Q8NA92 274 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms