RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 TMEM230Q96A57 120 aa11.92□□□□□ -0.5
CCDC78-216ENST00000544996 PINX1Q96BK5 328 aaKnown RBP11.92□□□□□ -0.5
CCDC78-216ENST00000544996 SLC25A21Q9BQT8 299 aaPredicted RBP11.92□□□□□ -0.5
CCDC78-216ENST00000544996 SRRQ9GZT4 340 aa11.92□□□□□ -0.5
CCDC78-216ENST00000544996 CACFD1Q9UGQ2 172 aa11.92□□□□□ -0.5
CCDC78-216ENST00000544996 IGHV3-35A0A0C4DH35 117 aa11.91□□□□□ -0.5
CCDC78-216ENST00000544996 TMEM213A2RRL7 107 aa11.91□□□□□ -0.5
CCDC78-216ENST00000544996 NUPL2O15504 423 aaKnown RBP11.91□□□□□ -0.5
CCDC78-216ENST00000544996 MT-CO2P00403 227 aa11.91□□□□□ -0.5
CCDC78-216ENST00000544996 MFAP4P55083 255 aa11.91□□□□□ -0.5
CCDC78-216ENST00000544996 ELLP55199 621 aaPredicted RBP11.91□□□□□ -0.5
CCDC78-216ENST00000544996 SPCS3P61009 180 aa11.91□□□□□ -0.5
CCDC78-216ENST00000544996 SRPXP78539 464 aa11.91□□□□□ -0.5
CCDC78-216ENST00000544996 TMEM187Q14656 261 aa11.91□□□□□ -0.5
CCDC78-216ENST00000544996 TRIQKQ629K1 86 aa11.91□□□□□ -0.5
CCDC78-216ENST00000544996 UNQ9165/PRO28630Q6UXU0 137 aa11.91□□□□□ -0.5
CCDC78-216ENST00000544996 Q6ZRM9 215 aa11.91□□□□□ -0.5
CCDC78-216ENST00000544996 TMED4Q7Z7H5 227 aa11.91□□□□□ -0.5
CCDC78-216ENST00000544996 Q8N1Y9 231 aa11.91□□□□□ -0.5
CCDC78-216ENST00000544996 UXS1Q8NBZ7 420 aa11.91□□□□□ -0.5
CCDC78-216ENST00000544996 TXN2Q99757 166 aa11.91□□□□□ -0.5
CCDC78-216ENST00000544996 ZNF436Q9C0F3 470 aaPredicted RBP11.91□□□□□ -0.5
CCDC78-216ENST00000544996 CACNG5Q9UF02 275 aa11.91□□□□□ -0.5
CCDC78-216ENST00000544996 IZUMO1RA6ND01 250 aa11.9□□□□□ -0.5
CCDC78-216ENST00000544996 I3L2K1 104 aa11.9□□□□□ -0.5
CCDC78-216ENST00000544996 CORTO00230 105 aa11.9□□□□□ -0.5
CCDC78-216ENST00000544996 RELQ04864 619 aaPredicted RBP11.9□□□□□ -0.5
CCDC78-216ENST00000544996 AARDQ4LEZ3 155 aa11.9□□□□□ -0.5
CCDC78-216ENST00000544996 TM4SF20Q53R12 229 aa11.9□□□□□ -0.5
CCDC78-216ENST00000544996 TMEM128Q5BJH2 165 aa11.9□□□□□ -0.5
CCDC78-216ENST00000544996 LGI3Q8N145 548 aa11.9□□□□□ -0.5
CCDC78-216ENST00000544996 CACNG8Q8WXS5 425 aa11.9□□□□□ -0.5
CCDC78-216ENST00000544996 GPR146Q96CH1 333 aa11.9□□□□□ -0.5
CCDC78-216ENST00000544996 MRPL27Q9P0M9 148 aaKnown RBP11.9□□□□□ -0.5
CCDC78-216ENST00000544996 SORL1Q92673 2214 aa11.89□□□□□ -0.51
CCDC78-216ENST00000544996 A0A0B4J2A0 478 aa11.89□□□□□ -0.51
CCDC78-216ENST00000544996 F8W735 103 aaPredicted RBP11.89□□□□□ -0.51
CCDC78-216ENST00000544996 NDUFA4O00483 81 aa11.89□□□□□ -0.51
CCDC78-216ENST00000544996 FRMD6-AS1P0C7T7 363 aa11.89□□□□□ -0.51
CCDC78-216ENST00000544996 SULT1A3P0DMM9 295 aa11.89□□□□□ -0.51
CCDC78-216ENST00000544996 SULT1A4P0DMN0 295 aa11.89□□□□□ -0.51
CCDC78-216ENST00000544996 IGHV4-30-4P0DP06 118 aa11.89□□□□□ -0.51
CCDC78-216ENST00000544996 FCGR2BP31994 310 aaPredicted RBP11.89□□□□□ -0.51
CCDC78-216ENST00000544996 SUPT4H1P63272 117 aaKnown RBP11.89□□□□□ -0.51
CCDC78-216ENST00000544996 GUCA2BQ16661 112 aa11.89□□□□□ -0.51
CCDC78-216ENST00000544996 C11orf87Q6NUJ2 197 aa11.89□□□□□ -0.51
CCDC78-216ENST00000544996 DUSP18Q8NEJ0 188 aa11.89□□□□□ -0.51
CCDC78-216ENST00000544996 TMEM190Q8WZ59 177 aa11.89□□□□□ -0.51
CCDC78-216ENST00000544996 ASCL2Q99929 193 aa11.89□□□□□ -0.51
CCDC78-216ENST00000544996 CHRDL1Q9BU40 450 aa11.89□□□□□ -0.51
CCDC78-216ENST00000544996 C20orf24Q9BUV8 137 aa11.89□□□□□ -0.51
CCDC78-216ENST00000544996 HEYLQ9NQ87 328 aaPredicted RBP11.89□□□□□ -0.51
CCDC78-216ENST00000544996 DAZ1Q9NQZ3 744 aaKnown RBP11.89□□□□□ -0.51
CCDC78-216ENST00000544996 SHPKQ9UHJ6 478 aa11.89□□□□□ -0.51
CCDC78-216ENST00000544996 NAP1L6A6NFF2 107 aa11.88□□□□□ -0.51
CCDC78-216ENST00000544996 CEBPZOSA8MTT3 80 aa11.88□□□□□ -0.51
CCDC78-216ENST00000544996 GNG7O60262 68 aa11.88□□□□□ -0.51
CCDC78-216ENST00000544996 CTSGP08311 255 aa11.88□□□□□ -0.51
CCDC78-216ENST00000544996 RNASE2P10153 161 aaKnown RBP11.88□□□□□ -0.51
CCDC78-216ENST00000544996 EDN2P20800 178 aa11.88□□□□□ -0.51
CCDC78-216ENST00000544996 ADMP35318 185 aa11.88□□□□□ -0.51
CCDC78-216ENST00000544996 NPBWR1P48145 328 aa11.88□□□□□ -0.51
CCDC78-216ENST00000544996 PRR13Q9NZ81 148 aa11.88□□□□□ -0.51
CCDC78-216ENST00000544996 CENPXA8MT69 81 aa11.87□□□□□ -0.51
CCDC78-216ENST00000544996 A8MZ25 164 aa11.87□□□□□ -0.51
CCDC78-216ENST00000544996 IGHV3-48P01763 117 aa11.87□□□□□ -0.51
CCDC78-216ENST00000544996 C8orf88P0DMB2 117 aa11.87□□□□□ -0.51
CCDC78-216ENST00000544996 VAMP1P23763 118 aa11.87□□□□□ -0.51
CCDC78-216ENST00000544996 HTR2BP41595 481 aa11.87□□□□□ -0.51
CCDC78-216ENST00000544996 CCR6P51684 374 aa11.87□□□□□ -0.51
CCDC78-216ENST00000544996 CD81P60033 236 aa11.87□□□□□ -0.51
CCDC78-216ENST00000544996 RBMS2Q15434 407 aaKnown RBP11.87□□□□□ -0.51
CCDC78-216ENST00000544996 BAK1Q16611 211 aa11.87□□□□□ -0.51
CCDC78-216ENST00000544996 RBPMS2Q6ZRY4 209 aaKnown RBP11.87□□□□□ -0.51
CCDC78-216ENST00000544996 LYZL2Q7Z4W2 148 aa11.87□□□□□ -0.51
CCDC78-216ENST00000544996 WDR89Q96FK6 387 aaPredicted RBP11.87□□□□□ -0.51
CCDC78-216ENST00000544996 HIPK2Q9H2X6 1198 aa11.87□□□□□ -0.51
CCDC78-216ENST00000544996 TUBA4BQ9H853 241 aa11.87□□□□□ -0.51
CCDC78-216ENST00000544996 MLXQ9UH92 298 aa11.87□□□□□ -0.51
CCDC78-216ENST00000544996 U3KQK5 164 aa11.87□□□□□ -0.51
CCDC78-216ENST00000544996 C15orf62A8K5M9 175 aa11.86□□□□□ -0.51
CCDC78-216ENST00000544996 ZNF785A8K8V0 405 aa11.86□□□□□ -0.51
CCDC78-216ENST00000544996 K7EMT4 169 aa11.86□□□□□ -0.51
CCDC78-216ENST00000544996 YIF1AO95070 293 aa11.86□□□□□ -0.51
CCDC78-216ENST00000544996 OPRK1P41145 380 aa11.86□□□□□ -0.51
CCDC78-216ENST00000544996 SMCO1Q147U7 214 aa11.86□□□□□ -0.51
CCDC78-216ENST00000544996 ANKRD55Q3KP44 614 aa11.86□□□□□ -0.51
CCDC78-216ENST00000544996 PVRIGQ6DKI7 326 aa11.86□□□□□ -0.51
CCDC78-216ENST00000544996 BTNL8Q6UX41 500 aa11.86□□□□□ -0.51
CCDC78-216ENST00000544996 SBSPONQ8IVN8 264 aa11.86□□□□□ -0.51
CCDC78-216ENST00000544996 TMEM61Q8N0U2 210 aa11.86□□□□□ -0.51
CCDC78-216ENST00000544996 CENPSQ8N2Z9 138 aa11.86□□□□□ -0.51
CCDC78-216ENST00000544996 NEURL2Q9BR09 285 aa11.86□□□□□ -0.51
CCDC78-216ENST00000544996 TRAV25A0A0B4J276 109 aa11.85□□□□□ -0.51
CCDC78-216ENST00000544996 LINC00854A0A1B0GVQ3 168 aa11.85□□□□□ -0.51
CCDC78-216ENST00000544996 DUXBA0A1W2PPF3 345 aa11.85□□□□□ -0.51
CCDC78-216ENST00000544996 RPS10-NUDT3A0A1W2PQS6 291 aa11.85□□□□□ -0.51
CCDC78-216ENST00000544996 SCGB2A1O75556 95 aa11.85□□□□□ -0.51
CCDC78-216ENST00000544996 BSXQ3C1V8 233 aa11.85□□□□□ -0.51
CCDC78-216ENST00000544996 NMSQ5H8A3 153 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms