RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 SCARB1Q8WTV0 552 aa8.95□□□□□ -0.98
HDAC4-216ENST00000544989 GALNT14Q96FL9 552 aa8.95□□□□□ -0.98
HDAC4-216ENST00000544989 WWC2-AS2Q96NR7 200 aa8.95□□□□□ -0.98
HDAC4-216ENST00000544989 RBM38Q9H0Z9 239 aaKnown RBP8.95□□□□□ -0.98
HDAC4-216ENST00000544989 TUBA4BQ9H853 241 aa8.95□□□□□ -0.98
HDAC4-216ENST00000544989 DAZ1Q9NQZ3 744 aaKnown RBP8.95□□□□□ -0.98
HDAC4-216ENST00000544989 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.95□□□□□ -0.98
HDAC4-216ENST00000544989 NDUFA13Q9P0J0 144 aa8.95□□□□□ -0.98
HDAC4-216ENST00000544989 MRPL27Q9P0M9 148 aaKnown RBP8.95□□□□□ -0.98
HDAC4-216ENST00000544989 S4R3C0 116 aa8.95□□□□□ -0.98
HDAC4-216ENST00000544989 DNAH7Q8WXX0 4024 aa8.95□□□□□ -0.98
HDAC4-216ENST00000544989 TRAV25A0A0B4J276 109 aa8.94□□□□□ -0.98
HDAC4-216ENST00000544989 TMEM213A2RRL7 107 aa8.94□□□□□ -0.98
HDAC4-216ENST00000544989 K7EIM0 57 aa8.94□□□□□ -0.98
HDAC4-216ENST00000544989 NUPL2O15504 423 aaKnown RBP8.94□□□□□ -0.98
HDAC4-216ENST00000544989 ST8SIA3O43173 380 aa8.94□□□□□ -0.98
HDAC4-216ENST00000544989 C8orf88P0DMB2 117 aa8.94□□□□□ -0.98
HDAC4-216ENST00000544989 HOXA1P49639 335 aaPredicted RBP8.94□□□□□ -0.98
HDAC4-216ENST00000544989 MFAP2P55001 183 aa8.94□□□□□ -0.98
HDAC4-216ENST00000544989 SPCS3P61009 180 aa8.94□□□□□ -0.98
HDAC4-216ENST00000544989 AARDQ4LEZ3 155 aa8.94□□□□□ -0.98
HDAC4-216ENST00000544989 SLC16A13Q7RTY0 426 aa8.94□□□□□ -0.98
HDAC4-216ENST00000544989 Q8N1Y9 231 aa8.94□□□□□ -0.98
HDAC4-216ENST00000544989 GLYATL2Q8WU03 294 aa8.94□□□□□ -0.98
HDAC4-216ENST00000544989 TMEM190Q8WZ59 177 aa8.94□□□□□ -0.98
HDAC4-216ENST00000544989 MISP3Q96FF7 219 aa8.94□□□□□ -0.98
HDAC4-216ENST00000544989 TMEM56-RWDD3S4R434 201 aa8.94□□□□□ -0.98
HDAC4-216ENST00000544989 I3L2K1 104 aa8.93□□□□□ -0.98
HDAC4-216ENST00000544989 K7EMT4 169 aa8.93□□□□□ -0.98
HDAC4-216ENST00000544989 ETV6P41212 452 aa8.93□□□□□ -0.98
HDAC4-216ENST00000544989 NPBWR1P48145 328 aa8.93□□□□□ -0.98
HDAC4-216ENST00000544989 LAMTOR1Q6IAA8 161 aa8.93□□□□□ -0.98
HDAC4-216ENST00000544989 C11orf87Q6NUJ2 197 aa8.93□□□□□ -0.98
HDAC4-216ENST00000544989 ADAMTSL5Q6ZMM2 481 aa8.93□□□□□ -0.98
HDAC4-216ENST00000544989 RBPMS2Q6ZRY4 209 aaKnown RBP8.93□□□□□ -0.98
HDAC4-216ENST00000544989 CCDC190Q86UF4 302 aa8.93□□□□□ -0.98
HDAC4-216ENST00000544989 NOXA1Q86UR1 476 aa8.93□□□□□ -0.98
HDAC4-216ENST00000544989 UBAC2Q8NBM4 344 aa8.93□□□□□ -0.98
HDAC4-216ENST00000544989 UXS1Q8NBZ7 420 aa8.93□□□□□ -0.98
HDAC4-216ENST00000544989 DUSP18Q8NEJ0 188 aa8.93□□□□□ -0.98
HDAC4-216ENST00000544989 LYSTQ99698 3801 aa8.93□□□□□ -0.98
HDAC4-216ENST00000544989 SLC25A21Q9BQT8 299 aaPredicted RBP8.93□□□□□ -0.98
HDAC4-216ENST00000544989 C19orf73Q9NVV2 129 aa8.93□□□□□ -0.98
HDAC4-216ENST00000544989 V9GYH0 126 aa8.93□□□□□ -0.98
HDAC4-216ENST00000544989 C15orf62A8K5M9 175 aa8.92□□□□□ -0.98
HDAC4-216ENST00000544989 MT-CO2P00403 227 aa8.92□□□□□ -0.98
HDAC4-216ENST00000544989 BMI1P35226 326 aa8.92□□□□□ -0.98
HDAC4-216ENST00000544989 HTR2BP41595 481 aa8.92□□□□□ -0.98
HDAC4-216ENST00000544989 CD81P60033 236 aa8.92□□□□□ -0.98
HDAC4-216ENST00000544989 KLF9Q13886 244 aaPredicted RBP8.92□□□□□ -0.98
HDAC4-216ENST00000544989 GUCA2BQ16661 112 aa8.92□□□□□ -0.98
HDAC4-216ENST00000544989 TMEM268Q5VZI3 342 aa8.92□□□□□ -0.98
HDAC4-216ENST00000544989 SBSPONQ8IVN8 264 aa8.92□□□□□ -0.98
HDAC4-216ENST00000544989 SELENOHQ8IZQ5 122 aaKnown RBP8.92□□□□□ -0.98
HDAC4-216ENST00000544989 TRIM63Q969Q1 353 aa8.92□□□□□ -0.98
HDAC4-216ENST00000544989 ASCL2Q99929 193 aa8.92□□□□□ -0.98
HDAC4-216ENST00000544989 NEURL2Q9BR09 285 aa8.92□□□□□ -0.98
HDAC4-216ENST00000544989 IGHV3-21A0A0B4J1V1 117 aa8.91□□□□□ -0.98
HDAC4-216ENST00000544989 A0A0B4J2A0 478 aa8.91□□□□□ -0.98
HDAC4-216ENST00000544989 DUXBA0A1W2PPF3 345 aa8.91□□□□□ -0.98
HDAC4-216ENST00000544989 RPS10-NUDT3A0A1W2PQS6 291 aa8.91□□□□□ -0.98
HDAC4-216ENST00000544989 IZUMO1RA6ND01 250 aa8.91□□□□□ -0.98
HDAC4-216ENST00000544989 ZNF785A8K8V0 405 aa8.91□□□□□ -0.98
HDAC4-216ENST00000544989 GNG7O60262 68 aa8.91□□□□□ -0.98
HDAC4-216ENST00000544989 CD5P06127 495 aa8.91□□□□□ -0.98
HDAC4-216ENST00000544989 CTSGP08311 255 aa8.91□□□□□ -0.98
HDAC4-216ENST00000544989 SULT1A3P0DMM9 295 aa8.91□□□□□ -0.98
HDAC4-216ENST00000544989 SULT1A4P0DMN0 295 aa8.91□□□□□ -0.98
HDAC4-216ENST00000544989 INPP1P49441 399 aa8.91□□□□□ -0.98
HDAC4-216ENST00000544989 TMEM187Q14656 261 aa8.91□□□□□ -0.98
HDAC4-216ENST00000544989 IZUMO4Q1ZYL8 232 aa8.91□□□□□ -0.98
HDAC4-216ENST00000544989 TM4SF20Q53R12 229 aa8.91□□□□□ -0.98
HDAC4-216ENST00000544989 TMEM128Q5BJH2 165 aa8.91□□□□□ -0.98
HDAC4-216ENST00000544989 PVRIGQ6DKI7 326 aa8.91□□□□□ -0.98
HDAC4-216ENST00000544989 UNQ9165/PRO28630Q6UXU0 137 aa8.91□□□□□ -0.98
HDAC4-216ENST00000544989 LGI3Q8N145 548 aa8.91□□□□□ -0.98
HDAC4-216ENST00000544989 PINX1Q96BK5 328 aaKnown RBP8.91□□□□□ -0.98
HDAC4-216ENST00000544989 SHPKQ9UHJ6 478 aa8.91□□□□□ -0.98
HDAC4-216ENST00000544989 STAB2Q8WWQ8 2551 aa8.91□□□□□ -0.98
HDAC4-216ENST00000544989 NAP1L6A6NFF2 107 aa8.9□□□□□ -0.98
HDAC4-216ENST00000544989 F8W735 103 aaPredicted RBP8.9□□□□□ -0.98
HDAC4-216ENST00000544989 AKR1C4P17516 323 aa8.9□□□□□ -0.98
HDAC4-216ENST00000544989 CCR6P51684 374 aa8.9□□□□□ -0.98
HDAC4-216ENST00000544989 ZNF79Q15937 498 aa8.9□□□□□ -0.98
HDAC4-216ENST00000544989 BTNL8Q6UX41 500 aa8.9□□□□□ -0.98
HDAC4-216ENST00000544989 TMEM61Q8N0U2 210 aa8.9□□□□□ -0.98
HDAC4-216ENST00000544989 LHFPL5Q8TAF8 219 aa8.9□□□□□ -0.98
HDAC4-216ENST00000544989 CACNG8Q8WXS5 425 aa8.9□□□□□ -0.98
HDAC4-216ENST00000544989 RCHY1Q96PM5 261 aa8.9□□□□□ -0.98
HDAC4-216ENST00000544989 SPAG8Q99932 426 aaPredicted RBP8.9□□□□□ -0.98
HDAC4-216ENST00000544989 SPATA25Q9BR10 227 aa8.9□□□□□ -0.98
HDAC4-216ENST00000544989 GINS3Q9BRX5 216 aa8.9□□□□□ -0.98
HDAC4-216ENST00000544989 CHRDL1Q9BU40 450 aa8.9□□□□□ -0.98
HDAC4-216ENST00000544989 C20orf24Q9BUV8 137 aa8.9□□□□□ -0.98
HDAC4-216ENST00000544989 HIPK2Q9H2X6 1198 aa8.9□□□□□ -0.98
HDAC4-216ENST00000544989 HEYLQ9NQ87 328 aaPredicted RBP8.9□□□□□ -0.98
HDAC4-216ENST00000544989 CACNG5Q9UF02 275 aa8.9□□□□□ -0.98
HDAC4-216ENST00000544989 MLXQ9UH92 298 aa8.9□□□□□ -0.98
HDAC4-216ENST00000544989 IGHV3-35A0A0C4DH35 117 aa8.89□□□□□ -0.99
HDAC4-216ENST00000544989 A0A0G2JRQ6 117 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms