RNA–Protein interactions for RNA: ENST00000544622.4

YBX3-216, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-216ENST00000544622 GPR146Q96CH1 333 aa8.62□□□□□ -1.03
YBX3-216ENST00000544622 RRNAD1Q96FB5 475 aaKnown RBP8.62□□□□□ -1.03
YBX3-216ENST00000544622 SDHCQ99643 169 aaPredicted RBP8.62□□□□□ -1.03
YBX3-216ENST00000544622 CHRDL1Q9BU40 450 aa8.62□□□□□ -1.03
YBX3-216ENST00000544622 PLEKHA3Q9HB20 300 aa8.62□□□□□ -1.03
YBX3-216ENST00000544622 MCUBQ9NWR8 336 aa8.62□□□□□ -1.03
YBX3-216ENST00000544622 TECRQ9NZ01 308 aaKnown RBP8.62□□□□□ -1.03
YBX3-216ENST00000544622 IGHV3-21A0A0B4J1V1 117 aa8.61□□□□□ -1.03
YBX3-216ENST00000544622 ZNF320A2RRD8 509 aa8.61□□□□□ -1.03
YBX3-216ENST00000544622 FRMD6-AS1P0C7T7 363 aa8.61□□□□□ -1.03
YBX3-216ENST00000544622 IGHV4-30-4P0DP06 118 aa8.61□□□□□ -1.03
YBX3-216ENST00000544622 FAUP35544 74 aaKnown RBP8.61□□□□□ -1.03
YBX3-216ENST00000544622 TM4SF20Q53R12 229 aa8.61□□□□□ -1.03
YBX3-216ENST00000544622 SPINK9Q5DT21 86 aa8.61□□□□□ -1.03
YBX3-216ENST00000544622 SPANXN2Q5MJ10 180 aa8.61□□□□□ -1.03
YBX3-216ENST00000544622 TMEM268Q5VZI3 342 aa8.61□□□□□ -1.03
YBX3-216ENST00000544622 SBSPONQ8IVN8 264 aa8.61□□□□□ -1.03
YBX3-216ENST00000544622 TMEM190Q8WZ59 177 aa8.61□□□□□ -1.03
YBX3-216ENST00000544622 TXN2Q99757 166 aa8.61□□□□□ -1.03
YBX3-216ENST00000544622 SLC25A21Q9BQT8 299 aaPredicted RBP8.61□□□□□ -1.03
YBX3-216ENST00000544622 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.61□□□□□ -1.03
YBX3-216ENST00000544622 KCNIP3Q9Y2W7 256 aa8.61□□□□□ -1.03
YBX3-216ENST00000544622 A0A0B4J2A0 478 aa8.6□□□□□ -1.03
YBX3-216ENST00000544622 IGHV3-35A0A0C4DH35 117 aa8.6□□□□□ -1.03
YBX3-216ENST00000544622 NDUFA4O00483 81 aa8.6□□□□□ -1.03
YBX3-216ENST00000544622 MT-CO2P00403 227 aa8.6□□□□□ -1.03
YBX3-216ENST00000544622 IFNA17P01571 189 aa8.6□□□□□ -1.03
YBX3-216ENST00000544622 RNASE2P10153 161 aaKnown RBP8.6□□□□□ -1.03
YBX3-216ENST00000544622 AKR1C4P17516 323 aa8.6□□□□□ -1.03
YBX3-216ENST00000544622 SPCS3P61009 180 aa8.6□□□□□ -1.03
YBX3-216ENST00000544622 TMEM128Q5BJH2 165 aa8.6□□□□□ -1.03
YBX3-216ENST00000544622 NMSQ5H8A3 153 aa8.6□□□□□ -1.03
YBX3-216ENST00000544622 SLC35G3Q8N808 338 aa8.6□□□□□ -1.03
YBX3-216ENST00000544622 UXS1Q8NBZ7 420 aa8.6□□□□□ -1.03
YBX3-216ENST00000544622 CACNG8Q8WXS5 425 aa8.6□□□□□ -1.03
YBX3-216ENST00000544622 MARC2Q969Z3 335 aa8.6□□□□□ -1.03
YBX3-216ENST00000544622 PALMDQ9NP74 551 aa8.6□□□□□ -1.03
YBX3-216ENST00000544622 PRR13Q9NZ81 148 aa8.6□□□□□ -1.03
YBX3-216ENST00000544622 MRPL27Q9P0M9 148 aaKnown RBP8.6□□□□□ -1.03
YBX3-216ENST00000544622 MLXQ9UH92 298 aa8.6□□□□□ -1.03
YBX3-216ENST00000544622 SHPKQ9UHJ6 478 aa8.6□□□□□ -1.03
YBX3-216ENST00000544622 K7EMT4 169 aa8.59□□□□□ -1.03
YBX3-216ENST00000544622 MFAP4P55083 255 aa8.59□□□□□ -1.03
YBX3-216ENST00000544622 LINC00322Q6ZN03 302 aaPredicted RBP8.59□□□□□ -1.03
YBX3-216ENST00000544622 LYZL2Q7Z4W2 148 aa8.59□□□□□ -1.03
YBX3-216ENST00000544622 TMEM61Q8N0U2 210 aa8.59□□□□□ -1.03
YBX3-216ENST00000544622 LRTM2Q8N967 370 aa8.59□□□□□ -1.03
YBX3-216ENST00000544622 MISP3Q96FF7 219 aa8.59□□□□□ -1.03
YBX3-216ENST00000544622 OR10C1Q96KK4 312 aa8.59□□□□□ -1.03
YBX3-216ENST00000544622 ASCL2Q99929 193 aa8.59□□□□□ -1.03
YBX3-216ENST00000544622 PDCD10Q9BUL8 212 aa8.59□□□□□ -1.03
YBX3-216ENST00000544622 GAR1Q9NY12 217 aaKnown RBP8.59□□□□□ -1.03
YBX3-216ENST00000544622 CACNG5Q9UF02 275 aa8.59□□□□□ -1.03
YBX3-216ENST00000544622 UFC1Q9Y3C8 167 aa8.59□□□□□ -1.03
YBX3-216ENST00000544622 DNAH7Q8WXX0 4024 aa8.59□□□□□ -1.03
YBX3-216ENST00000544622 C15orf62A8K5M9 175 aa8.58□□□□□ -1.04
YBX3-216ENST00000544622 CD7P09564 240 aa8.58□□□□□ -1.04
YBX3-216ENST00000544622 SNCAP37840 140 aa8.58□□□□□ -1.04
YBX3-216ENST00000544622 SUB1P53999 127 aaKnown RBP eCLIP8.58□□□□□ -1.04
YBX3-216ENST00000544622 Q56UQ5 140 aa8.58□□□□□ -1.04
YBX3-216ENST00000544622 ZNF57Q68EA5 555 aaPredicted RBP8.58□□□□□ -1.04
YBX3-216ENST00000544622 UBAC2Q8NBM4 344 aa8.58□□□□□ -1.04
YBX3-216ENST00000544622 TMEM170AQ8WVE7 144 aa8.58□□□□□ -1.04
YBX3-216ENST00000544622 WDR89Q96FK6 387 aaPredicted RBP8.58□□□□□ -1.04
YBX3-216ENST00000544622 FNDC4Q9H6D8 234 aaPredicted RBP8.58□□□□□ -1.04
YBX3-216ENST00000544622 DAZ1Q9NQZ3 744 aaKnown RBP8.58□□□□□ -1.04
YBX3-216ENST00000544622 CACFD1Q9UGQ2 172 aa8.58□□□□□ -1.04
YBX3-216ENST00000544622 TRAV25A0A0B4J276 109 aa8.57□□□□□ -1.04
YBX3-216ENST00000544622 CORTO00230 105 aa8.57□□□□□ -1.04
YBX3-216ENST00000544622 PITX3O75364 302 aa8.57□□□□□ -1.04
YBX3-216ENST00000544622 TMEM50AO95807 157 aa8.57□□□□□ -1.04
YBX3-216ENST00000544622 IGHV3-48P01763 117 aa8.57□□□□□ -1.04
YBX3-216ENST00000544622 SULT1A3P0DMM9 295 aa8.57□□□□□ -1.04
YBX3-216ENST00000544622 SULT1A4P0DMN0 295 aa8.57□□□□□ -1.04
YBX3-216ENST00000544622 ANXA3P12429 323 aa8.57□□□□□ -1.04
YBX3-216ENST00000544622 BTCP35070 178 aa8.57□□□□□ -1.04
YBX3-216ENST00000544622 HTR2BP41595 481 aa8.57□□□□□ -1.04
YBX3-216ENST00000544622 CCR6P51684 374 aa8.57□□□□□ -1.04
YBX3-216ENST00000544622 SRPXP78539 464 aa8.57□□□□□ -1.04
YBX3-216ENST00000544622 MLANAQ16655 118 aa8.57□□□□□ -1.04
YBX3-216ENST00000544622 ANKRD55Q3KP44 614 aa8.57□□□□□ -1.04
YBX3-216ENST00000544622 C2orf83Q53S99 150 aa8.57□□□□□ -1.04
YBX3-216ENST00000544622 BTNL8Q6UX41 500 aa8.57□□□□□ -1.04
YBX3-216ENST00000544622 GTSCR1Q86UQ5 136 aa8.57□□□□□ -1.04
YBX3-216ENST00000544622 LGI3Q8N145 548 aa8.57□□□□□ -1.04
YBX3-216ENST00000544622 RNASE11Q8TAA1 199 aaKnown RBP8.57□□□□□ -1.04
YBX3-216ENST00000544622 DYNLRB2Q8TF09 96 aa8.57□□□□□ -1.04
YBX3-216ENST00000544622 PINX1Q96BK5 328 aaKnown RBP8.57□□□□□ -1.04
YBX3-216ENST00000544622 TM2D3Q9BRN9 247 aa8.57□□□□□ -1.04
YBX3-216ENST00000544622 MRPL36Q9P0J6 103 aaKnown RBP8.57□□□□□ -1.04
YBX3-216ENST00000544622 HSPB7Q9UBY9 170 aa8.57□□□□□ -1.04
YBX3-216ENST00000544622 U3KQK5 164 aa8.57□□□□□ -1.04
YBX3-216ENST00000544622 NBEAL2Q6ZNJ1 2754 aa8.57□□□□□ -1.04
YBX3-216ENST00000544622 CSMD3Q7Z407 3707 aa8.56□□□□□ -1.04
YBX3-216ENST00000544622 DUXBA0A1W2PPF3 345 aa8.56□□□□□ -1.04
YBX3-216ENST00000544622 NAP1L6A6NFF2 107 aa8.56□□□□□ -1.04
YBX3-216ENST00000544622 NUPL2O15504 423 aaKnown RBP8.56□□□□□ -1.04
YBX3-216ENST00000544622 NDUFB6O95139 128 aa8.56□□□□□ -1.04
YBX3-216ENST00000544622 SFT2D2O95562 160 aa8.56□□□□□ -1.04
YBX3-216ENST00000544622 NPBWR1P48145 328 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms