RNA–Protein interactions for RNA: ENST00000544079.2

CCT4-204, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

TSL 2 BASIC

Gene CCT4, Length 2,261 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-204ENST00000544079 SAMD13Q5VXD3 122 aa14.96□□□□□ -0.01
CCT4-204ENST00000544079 SSX8Q7RTT4 187 aa14.96□□□□□ -0.01
CCT4-204ENST00000544079 COQ2Q96H96 371 aa14.96□□□□□ -0.01
CCT4-204ENST00000544079 SSBP4Q9BWG4 385 aaPredicted RBP14.96□□□□□ -0.01
CCT4-204ENST00000544079 TMEM140Q9NV12 185 aa14.96□□□□□ -0.01
CCT4-204ENST00000544079 FOXA2Q9Y261 457 aaPredicted RBP14.96□□□□□ -0.01
CCT4-204ENST00000544079 GDF1P27539 372 aa14.95□□□□□ -0.02
CCT4-204ENST00000544079 ATP5IP56385 69 aaPredicted RBP14.95□□□□□ -0.02
CCT4-204ENST00000544079 LINC00205P59089 165 aa14.95□□□□□ -0.02
CCT4-204ENST00000544079 C9orf135Q5VTT2 229 aa14.95□□□□□ -0.02
CCT4-204ENST00000544079 PRSS57Q6UWY2 283 aa14.95□□□□□ -0.02
CCT4-204ENST00000544079 MAFAQ8NHW3 353 aaPredicted RBP14.95□□□□□ -0.02
CCT4-204ENST00000544079 SMPXQ9UHP9 88 aa14.95□□□□□ -0.02
CCT4-204ENST00000544079 AHRRA9YTQ3 701 aa14.95□□□□□ -0.02
CCT4-204ENST00000544079 AESQ08117 197 aa14.95□□□□□ -0.02
CCT4-204ENST00000544079 CT83Q5H943 113 aa14.95□□□□□ -0.02
CCT4-204ENST00000544079 LINC00173Q6ZV60 143 aa14.95□□□□□ -0.02
CCT4-204ENST00000544079 SLC25A33Q9BSK2 321 aa14.95□□□□□ -0.02
CCT4-204ENST00000544079 ENY2Q9NPA8 101 aa14.95□□□□□ -0.02
CCT4-204ENST00000544079 SH2D7A6NKC9 451 aaPredicted RBP14.94□□□□□ -0.02
CCT4-204ENST00000544079 SPINT2O43291 252 aa14.94□□□□□ -0.02
CCT4-204ENST00000544079 HSPE1P61604 102 aaKnown RBP14.94□□□□□ -0.02
CCT4-204ENST00000544079 TMEM251Q8N6I4 163 aa14.94□□□□□ -0.02
CCT4-204ENST00000544079 NDFIP1Q9BT67 221 aa14.94□□□□□ -0.02
CCT4-204ENST00000544079 C7orf69Q9H7B7 122 aa14.94□□□□□ -0.02
CCT4-204ENST00000544079 A0A0G2JMM0 328 aa14.94□□□□□ -0.02
CCT4-204ENST00000544079 A0A1W2PPB8 328 aa14.94□□□□□ -0.02
CCT4-204ENST00000544079 KIR3DP1A8MWS1 328 aa14.94□□□□□ -0.02
CCT4-204ENST00000544079 PROP1O75360 226 aa14.94□□□□□ -0.02
CCT4-204ENST00000544079 MT-CO3P00414 261 aa14.94□□□□□ -0.02
CCT4-204ENST00000544079 HOXC12P31275 282 aa14.94□□□□□ -0.02
CCT4-204ENST00000544079 CAMPP49913 170 aa14.94□□□□□ -0.02
CCT4-204ENST00000544079 ZNF841Q6ZN19 808 aa14.94□□□□□ -0.02
CCT4-204ENST00000544079 AMMECR1Q9Y4X0 333 aaPredicted RBP14.94□□□□□ -0.02
CCT4-204ENST00000544079 GON4LQ3T8J9 2241 aa14.93□□□□□ -0.02
CCT4-204ENST00000544079 MRPL49Q13405 166 aaKnown RBP14.93□□□□□ -0.02
CCT4-204ENST00000544079 FNDC4Q9H6D8 234 aaPredicted RBP14.93□□□□□ -0.02
CCT4-204ENST00000544079 TMEM14BQ9NUH8 114 aa14.93□□□□□ -0.02
CCT4-204ENST00000544079 NCKAP5O14513 1909 aa14.93□□□□□ -0.02
CCT4-204ENST00000544079 TRAV3A0A0B4J244 114 aa14.92□□□□□ -0.02
CCT4-204ENST00000544079 RFPL3SP0C7P2 107 aa14.92□□□□□ -0.02
CCT4-204ENST00000544079 NHLH1Q02575 133 aa14.92□□□□□ -0.02
CCT4-204ENST00000544079 LYSMD4Q5XG99 296 aa14.92□□□□□ -0.02
CCT4-204ENST00000544079 OR2K2Q8NGT1 345 aa14.92□□□□□ -0.02
CCT4-204ENST00000544079 LOXL2Q9Y4K0 774 aa14.92□□□□□ -0.02
CCT4-204ENST00000544079 HCFC1P51610 2035 aa14.92□□□□□ -0.02
CCT4-204ENST00000544079 TET2Q6N021 2002 aaPredicted RBP14.92□□□□□ -0.02
CCT4-204ENST00000544079 C15orf65H3BRN8 121 aa14.92□□□□□ -0.02
CCT4-204ENST00000544079 PEX7O00628 323 aa14.92□□□□□ -0.02
CCT4-204ENST00000544079 CEBPDP49716 269 aaPredicted RBP14.92□□□□□ -0.02
CCT4-204ENST00000544079 FOXG1P55316 489 aaPredicted RBP14.92□□□□□ -0.02
CCT4-204ENST00000544079 WFDC8Q8IUA0 241 aa14.92□□□□□ -0.02
CCT4-204ENST00000544079 S1PR3Q99500 378 aa14.92□□□□□ -0.02
CCT4-204ENST00000544079 AKIRIN1Q9H9L7 192 aaPredicted RBP14.92□□□□□ -0.02
CCT4-204ENST00000544079 JKAMPQ9P055 326 aa14.92□□□□□ -0.02
CCT4-204ENST00000544079 MED12LQ86YW9 2145 aa14.92□□□□□ -0.02
CCT4-204ENST00000544079 VWC2LB2RUY7 222 aa14.91□□□□□ -0.02
CCT4-204ENST00000544079 PPIAL4DF5H284 164 aa14.91□□□□□ -0.02
CCT4-204ENST00000544079 LRRC29Q8WV35 223 aa14.91□□□□□ -0.02
CCT4-204ENST00000544079 EYSQ5T1H1 3165 aa14.91□□□□□ -0.02
CCT4-204ENST00000544079 TRANK1O15050 2925 aa14.91□□□□□ -0.02
CCT4-204ENST00000544079 IGHV5-10-1A0A0J9YXX1 117 aa14.91□□□□□ -0.02
CCT4-204ENST00000544079 OR13A1Q8NGR1 328 aa14.91□□□□□ -0.02
CCT4-204ENST00000544079 OR1N2Q8NGR9 330 aa14.91□□□□□ -0.02
CCT4-204ENST00000544079 FAM167A-AS1Q96KT0 104 aa14.91□□□□□ -0.02
CCT4-204ENST00000544079 JMJD8Q96S16 334 aa14.91□□□□□ -0.02
CCT4-204ENST00000544079 NPFFR1Q9GZQ6 430 aa14.91□□□□□ -0.02
CCT4-204ENST00000544079 GFRA4Q9GZZ7 299 aa14.91□□□□□ -0.02
CCT4-204ENST00000544079 JPT1Q9UK76 154 aa14.91□□□□□ -0.02
CCT4-204ENST00000544079 IGHV3-43A0A0B4J1X8 118 aa14.9□□□□□ -0.02
CCT4-204ENST00000544079 APOA2P02652 100 aa14.9□□□□□ -0.02
CCT4-204ENST00000544079 IGHV3-43DP0DP04 118 aa14.9□□□□□ -0.02
CCT4-204ENST00000544079 COL8A2P25067 703 aa14.9□□□□□ -0.02
CCT4-204ENST00000544079 UBE2L3P68036 154 aaKnown RBP14.9□□□□□ -0.02
CCT4-204ENST00000544079 OR10AG1Q8NH19 301 aa14.9□□□□□ -0.02
CCT4-204ENST00000544079 VSTM2AQ8TAG5 236 aa14.9□□□□□ -0.02
CCT4-204ENST00000544079 SIVA1O15304 175 aa14.9□□□□□ -0.02
CCT4-204ENST00000544079 ZNF329Q86UD4 541 aa14.9□□□□□ -0.02
CCT4-204ENST00000544079 TUSC5Q8IXB3 177 aa14.9□□□□□ -0.02
CCT4-204ENST00000544079 A8MWL6 223 aa14.89□□□□□ -0.03
CCT4-204ENST00000544079 PPIAL4GP0DN37 164 aa14.89□□□□□ -0.03
CCT4-204ENST00000544079 FAM90A1Q86YD7 464 aa14.89□□□□□ -0.03
CCT4-204ENST00000544079 VKORC1L1Q8N0U8 176 aa14.89□□□□□ -0.03
CCT4-204ENST00000544079 NANOS1Q8WY41 292 aaKnown RBP14.89□□□□□ -0.03
CCT4-204ENST00000544079 DDB2Q92466 427 aa14.89□□□□□ -0.03
CCT4-204ENST00000544079 SLC25A2Q9BXI2 301 aa14.89□□□□□ -0.03
CCT4-204ENST00000544079 A0A0G2JLM5 398 aa14.89□□□□□ -0.03
CCT4-204ENST00000544079 PSMB11A5LHX3 300 aa14.89□□□□□ -0.03
CCT4-204ENST00000544079 FGF6P10767 208 aa14.89□□□□□ -0.03
CCT4-204ENST00000544079 HSD52Q0P140 79 aa14.89□□□□□ -0.03
CCT4-204ENST00000544079 PRSS22Q9GZN4 317 aa14.89□□□□□ -0.03
CCT4-204ENST00000544079 RPP21Q9H633 154 aaKnown RBP14.89□□□□□ -0.03
CCT4-204ENST00000544079 TMEM189A5PLL7 270 aa14.88□□□□□ -0.03
CCT4-204ENST00000544079 DEFB108AA8MXU0 73 aa14.88□□□□□ -0.03
CCT4-204ENST00000544079 IQCF6A8MYZ5 107 aa14.88□□□□□ -0.03
CCT4-204ENST00000544079 C2CD4DB7Z1M9 353 aa14.88□□□□□ -0.03
CCT4-204ENST00000544079 FAM87AP0C7U9 286 aa14.88□□□□□ -0.03
CCT4-204ENST00000544079 ACP7Q6ZNF0 438 aa14.88□□□□□ -0.03
CCT4-204ENST00000544079 OR9G4Q8NGQ1 327 aa14.88□□□□□ -0.03
CCT4-204ENST00000544079 LINC00479Q96M42 142 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms