RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 I3L521 148 aa11.21□□□□□ -0.61
TNFRSF1A-216ENST00000543995 CORTO00230 105 aa11.21□□□□□ -0.61
TNFRSF1A-216ENST00000543995 IGHV3-23P01764 117 aa11.21□□□□□ -0.61
TNFRSF1A-216ENST00000543995 PF4P02776 101 aa11.21□□□□□ -0.61
TNFRSF1A-216ENST00000543995 NPY1RP25929 384 aa11.21□□□□□ -0.61
TNFRSF1A-216ENST00000543995 EEF1AKMT3Q96AZ1 226 aa11.21□□□□□ -0.61
TNFRSF1A-216ENST00000543995 DUX3Q96PT4 197 aa11.21□□□□□ -0.61
TNFRSF1A-216ENST00000543995 PAIP2BQ9ULR5 123 aaKnown RBP11.21□□□□□ -0.61
TNFRSF1A-216ENST00000543995 LSM5Q9Y4Y9 91 aaKnown RBP11.21□□□□□ -0.61
TNFRSF1A-216ENST00000543995 TENM1Q9UKZ4 2725 aa11.21□□□□□ -0.61
TNFRSF1A-216ENST00000543995 MFSD2BA6NFX1 497 aa11.2□□□□□ -0.62
TNFRSF1A-216ENST00000543995 TSPAN15O95858 294 aa11.2□□□□□ -0.62
TNFRSF1A-216ENST00000543995 MBPP02686 304 aaPredicted RBP11.2□□□□□ -0.62
TNFRSF1A-216ENST00000543995 S100A10P60903 97 aa11.2□□□□□ -0.62
TNFRSF1A-216ENST00000543995 RPP30P78346 268 aaKnown RBP11.2□□□□□ -0.62
TNFRSF1A-216ENST00000543995 BSXQ3C1V8 233 aa11.2□□□□□ -0.62
TNFRSF1A-216ENST00000543995 C2orf83Q53S99 150 aa11.2□□□□□ -0.62
TNFRSF1A-216ENST00000543995 ZNF343Q6P1L6 599 aa11.2□□□□□ -0.62
TNFRSF1A-216ENST00000543995 Q6ZNX1 250 aa11.2□□□□□ -0.62
TNFRSF1A-216ENST00000543995 NOXA1Q86UR1 476 aa11.2□□□□□ -0.62
TNFRSF1A-216ENST00000543995 OR11H1Q8NG94 326 aa11.2□□□□□ -0.62
TNFRSF1A-216ENST00000543995 DPF1Q92782 380 aa11.2□□□□□ -0.62
TNFRSF1A-216ENST00000543995 STAB1Q9NY15 2570 aa11.2□□□□□ -0.62
TNFRSF1A-216ENST00000543995 TRBV7-1A0A0A6YYK4 115 aa11.19□□□□□ -0.62
TNFRSF1A-216ENST00000543995 CCL24O00175 119 aa11.19□□□□□ -0.62
TNFRSF1A-216ENST00000543995 LY86O95711 162 aa11.19□□□□□ -0.62
TNFRSF1A-216ENST00000543995 MT-CO2P00403 227 aa11.19□□□□□ -0.62
TNFRSF1A-216ENST00000543995 OPRK1P41145 380 aa11.19□□□□□ -0.62
TNFRSF1A-216ENST00000543995 H2BFSP57053 126 aa11.19□□□□□ -0.62
TNFRSF1A-216ENST00000543995 CYCSP99999 105 aaKnown RBP11.19□□□□□ -0.62
TNFRSF1A-216ENST00000543995 RUNX1Q01196 453 aa11.19□□□□□ -0.62
TNFRSF1A-216ENST00000543995 SPANXN5Q5MJ07 72 aa11.19□□□□□ -0.62
TNFRSF1A-216ENST00000543995 OR1N2Q8NGR9 330 aa11.19□□□□□ -0.62
TNFRSF1A-216ENST00000543995 VN1R17PQ8TDU5 208 aa11.19□□□□□ -0.62
TNFRSF1A-216ENST00000543995 RAX2Q96IS3 184 aa11.19□□□□□ -0.62
TNFRSF1A-216ENST00000543995 NMES1Q9C002 83 aa11.19□□□□□ -0.62
TNFRSF1A-216ENST00000543995 PSENENQ9NZ42 101 aa11.19□□□□□ -0.62
TNFRSF1A-216ENST00000543995 PEF1Q9UBV8 284 aaKnown RBP11.19□□□□□ -0.62
TNFRSF1A-216ENST00000543995 IGHV4OR15-8A0A075B7B6 117 aa11.19□□□□□ -0.62
TNFRSF1A-216ENST00000543995 A0A087WW49 117 aa11.19□□□□□ -0.62
TNFRSF1A-216ENST00000543995 H3BP45 60 aa11.19□□□□□ -0.62
TNFRSF1A-216ENST00000543995 K7EIM0 57 aa11.19□□□□□ -0.62
TNFRSF1A-216ENST00000543995 K7EPK0 472 aa11.19□□□□□ -0.62
TNFRSF1A-216ENST00000543995 L7N2F9 121 aa11.19□□□□□ -0.62
TNFRSF1A-216ENST00000543995 HSPB1P04792 205 aaKnown RBP11.19□□□□□ -0.62
TNFRSF1A-216ENST00000543995 IFNA4P05014 189 aa11.19□□□□□ -0.62
TNFRSF1A-216ENST00000543995 OR8U8P0C7N1 319 aa11.19□□□□□ -0.62
TNFRSF1A-216ENST00000543995 MYCNOSP40205 109 aa11.19□□□□□ -0.62
TNFRSF1A-216ENST00000543995 ATP5IP56385 69 aaPredicted RBP11.19□□□□□ -0.62
TNFRSF1A-216ENST00000543995 RAB11AP62491 216 aa11.19□□□□□ -0.62
TNFRSF1A-216ENST00000543995 VAMP2P63027 116 aa11.19□□□□□ -0.62
TNFRSF1A-216ENST00000543995 ZNF616Q08AN1 781 aa11.19□□□□□ -0.62
TNFRSF1A-216ENST00000543995 RAB32Q13637 225 aa11.19□□□□□ -0.62
TNFRSF1A-216ENST00000543995 FAM209BQ5JX69 171 aa11.19□□□□□ -0.62
TNFRSF1A-216ENST00000543995 CLEC19AQ6UXS0 136 aa11.19□□□□□ -0.62
TNFRSF1A-216ENST00000543995 UBAC2Q8NBM4 344 aa11.19□□□□□ -0.62
TNFRSF1A-216ENST00000543995 SCARB1Q8WTV0 552 aa11.19□□□□□ -0.62
TNFRSF1A-216ENST00000543995 RAB40CQ96S21 281 aa11.19□□□□□ -0.62
TNFRSF1A-216ENST00000543995 RANGRFQ9HD47 186 aaPredicted RBP11.19□□□□□ -0.62
TNFRSF1A-216ENST00000543995 RCL1Q9Y2P8 373 aaKnown RBP11.19□□□□□ -0.62
TNFRSF1A-216ENST00000543995 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.18□□□□□ -0.62
TNFRSF1A-216ENST00000543995 A0A1B0GVG6 124 aa11.18□□□□□ -0.62
TNFRSF1A-216ENST00000543995 LINC01619G3V211 115 aa11.18□□□□□ -0.62
TNFRSF1A-216ENST00000543995 I3L2K1 104 aa11.18□□□□□ -0.62
TNFRSF1A-216ENST00000543995 TRBV12-3P01733 135 aa11.18□□□□□ -0.62
TNFRSF1A-216ENST00000543995 IGHV3-48P01763 117 aa11.18□□□□□ -0.62
TNFRSF1A-216ENST00000543995 PVALBP20472 110 aaPredicted RBP11.18□□□□□ -0.62
TNFRSF1A-216ENST00000543995 RRAS2P62070 204 aaPredicted RBP11.18□□□□□ -0.62
TNFRSF1A-216ENST00000543995 FCN2Q15485 313 aa11.18□□□□□ -0.62
TNFRSF1A-216ENST00000543995 LRRC37A5PQ49AS3 106 aa11.18□□□□□ -0.62
TNFRSF1A-216ENST00000543995 PVRIGQ6DKI7 326 aa11.18□□□□□ -0.62
TNFRSF1A-216ENST00000543995 RNASEH2CQ8TDP1 164 aaKnown RBP11.18□□□□□ -0.62
TNFRSF1A-216ENST00000543995 TMEM170AQ8WVE7 144 aa11.18□□□□□ -0.62
TNFRSF1A-216ENST00000543995 SMIM8Q96KF7 97 aa11.18□□□□□ -0.62
TNFRSF1A-216ENST00000543995 CCDC140Q96MF4 163 aa11.18□□□□□ -0.62
TNFRSF1A-216ENST00000543995 C21orf62Q9NYP8 219 aa11.18□□□□□ -0.62
TNFRSF1A-216ENST00000543995 STRAPQ9Y3F4 350 aaKnown RBP11.18□□□□□ -0.62
TNFRSF1A-216ENST00000543995 RPS10-NUDT3A0A1W2PQS6 291 aa11.17□□□□□ -0.62
TNFRSF1A-216ENST00000543995 C15orf62A8K5M9 175 aa11.17□□□□□ -0.62
TNFRSF1A-216ENST00000543995 CXCL3P19876 107 aa11.17□□□□□ -0.62
TNFRSF1A-216ENST00000543995 GPR183P32249 361 aa11.17□□□□□ -0.62
TNFRSF1A-216ENST00000543995 IL15RAQ13261 267 aa11.17□□□□□ -0.62
TNFRSF1A-216ENST00000543995 Q56UQ5 140 aa11.17□□□□□ -0.62
TNFRSF1A-216ENST00000543995 ACSM6Q6P461 480 aa11.17□□□□□ -0.62
TNFRSF1A-216ENST00000543995 ETV3LQ6ZN32 361 aa11.17□□□□□ -0.62
TNFRSF1A-216ENST00000543995 OR11H7Q8NGC8 314 aa11.17□□□□□ -0.62
TNFRSF1A-216ENST00000543995 ZNF502Q8TBZ5 544 aa11.17□□□□□ -0.62
TNFRSF1A-216ENST00000543995 ZC4H2Q9NQZ6 224 aa11.17□□□□□ -0.62
TNFRSF1A-216ENST00000543995 PPP5D1E7EU14 171 aa11.16□□□□□ -0.62
TNFRSF1A-216ENST00000543995 CLEC3BP05452 202 aa11.16□□□□□ -0.62
TNFRSF1A-216ENST00000543995 ARL3P36405 182 aa11.16□□□□□ -0.62
TNFRSF1A-216ENST00000543995 BCAP31P51572 246 aa11.16□□□□□ -0.62
TNFRSF1A-216ENST00000543995 MFAP4P55083 255 aa11.16□□□□□ -0.62
TNFRSF1A-216ENST00000543995 TAS2R30P59541 319 aa11.16□□□□□ -0.62
TNFRSF1A-216ENST00000543995 ETFRF1Q6IPR1 90 aa11.16□□□□□ -0.62
TNFRSF1A-216ENST00000543995 PPP1R1CQ8WVI7 109 aa11.16□□□□□ -0.62
TNFRSF1A-216ENST00000543995 OR4C12Q96R67 309 aa11.16□□□□□ -0.62
TNFRSF1A-216ENST00000543995 FNDC4Q9H6D8 234 aaPredicted RBP11.16□□□□□ -0.62
TNFRSF1A-216ENST00000543995 GAR1Q9NY12 217 aaKnown RBP11.16□□□□□ -0.62
TNFRSF1A-216ENST00000543995 ANK2Q01484 3957 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms