RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, human

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIT-213	ENST00000543324	LGI3	Q8N145	548 aa		5.11	□□□□□ -1.59
CIT-213	ENST00000543324	OR2C3	Q8N628	320 aa		5.11	□□□□□ -1.59
CIT-213	ENST00000543324	CYB561D1	Q8N8Q1	229 aa		5.11	□□□□□ -1.59
CIT-213	ENST00000543324	CCDC71L	Q8N9Z2	235 aa		5.11	□□□□□ -1.59
CIT-213	ENST00000543324	TMEM104	Q8NE00	496 aa		5.11	□□□□□ -1.59
CIT-213	ENST00000543324	OR10A7	Q8NGE5	316 aa		5.11	□□□□□ -1.59
CIT-213	ENST00000543324	OR2G3	Q8NGZ4	309 aa		5.11	□□□□□ -1.59
CIT-213	ENST00000543324	OR4X1	Q8NH49	305 aa		5.11	□□□□□ -1.59
CIT-213	ENST00000543324	TMEM170A	Q8WVE7	144 aa		5.11	□□□□□ -1.59
CIT-213	ENST00000543324	MBD3L1	Q8WWY6	194 aa		5.11	□□□□□ -1.59
CIT-213	ENST00000543324	TMEM18	Q96B42	140 aa		5.11	□□□□□ -1.59
CIT-213	ENST00000543324	BTF3L4	Q96K17	158 aa		5.11	□□□□□ -1.59
CIT-213	ENST00000543324	IMMP2L	Q96T52	175 aa		5.11	□□□□□ -1.59
CIT-213	ENST00000543324	SPIN2A	Q99865	258 aa		5.11	□□□□□ -1.59
CIT-213	ENST00000543324	SPIN2B	Q9BPZ2	258 aa		5.11	□□□□□ -1.59
CIT-213	ENST00000543324	SNHG12	Q9BXW3	62 aa		5.11	□□□□□ -1.59
CIT-213	ENST00000543324	PARP12	Q9H0J9	701 aa	Known RBP	5.11	□□□□□ -1.59
CIT-213	ENST00000543324	SH3BGRL3	Q9H299	93 aa		5.11	□□□□□ -1.59
CIT-213	ENST00000543324	ZNF702P	Q9H963	129 aa		5.11	□□□□□ -1.59
CIT-213	ENST00000543324	EDA2R	Q9HAV5	297 aa		5.11	□□□□□ -1.59
CIT-213	ENST00000543324	SERTAD4	Q9NUC0	356 aa		5.11	□□□□□ -1.59
CIT-213	ENST00000543324	OR14J1	Q9UGF5	321 aa		5.11	□□□□□ -1.59
CIT-213	ENST00000543324	RNF150	Q9ULK6	438 aa		5.11	□□□□□ -1.59
CIT-213	ENST00000543324	TCF19	Q9Y242	345 aa		5.11	□□□□□ -1.59
CIT-213	ENST00000543324	RCL1	Q9Y2P8	373 aa	Known RBP	5.11	□□□□□ -1.59
CIT-213	ENST00000543324	GOLT1B	Q9Y3E0	138 aa		5.11	□□□□□ -1.59
CIT-213	ENST00000543324	TBL2	Q9Y4P3	447 aa	Known RBP	5.11	□□□□□ -1.59
CIT-213	ENST00000543324	LINC00312	Q9Y6C7	94 aa		5.11	□□□□□ -1.59
CIT-213	ENST00000543324	PKD1	P98161	4303 aa		5.11	□□□□□ -1.59
CIT-213	ENST00000543324		A6NDX4	124 aa		5.1	□□□□□ -1.59
CIT-213	ENST00000543324	ADARB2-AS1	A8MUL3	147 aa		5.1	□□□□□ -1.59
CIT-213	ENST00000543324	SDCBP	O00560	298 aa	Predicted RBP	5.1	□□□□□ -1.59
CIT-213	ENST00000543324	SLC25A17	O43808	307 aa		5.1	□□□□□ -1.59
CIT-213	ENST00000543324	HAND1	O96004	215 aa		5.1	□□□□□ -1.59
CIT-213	ENST00000543324	TYMS	P04818	313 aa		5.1	□□□□□ -1.59
CIT-213	ENST00000543324	RPLP1	P05386	114 aa	Known RBP	5.1	□□□□□ -1.59
CIT-213	ENST00000543324	PFN1	P07737	140 aa	Known RBP	5.1	□□□□□ -1.59
CIT-213	ENST00000543324	SNRPC	P09234	159 aa	Known RBP	5.1	□□□□□ -1.59
CIT-213	ENST00000543324	BCL3	P20749	454 aa		5.1	□□□□□ -1.59
CIT-213	ENST00000543324	FUT3	P21217	361 aa		5.1	□□□□□ -1.59
CIT-213	ENST00000543324	HOXD3	P31249	432 aa	Predicted RBP	5.1	□□□□□ -1.59
CIT-213	ENST00000543324	NPBWR2	P48146	333 aa		5.1	□□□□□ -1.59
CIT-213	ENST00000543324	CCL20	P78556	96 aa		5.1	□□□□□ -1.59
CIT-213	ENST00000543324	GNMT	Q14749	295 aa		5.1	□□□□□ -1.59
CIT-213	ENST00000543324	CNN3	Q15417	329 aa	Known RBP	5.1	□□□□□ -1.59
CIT-213	ENST00000543324	TMEM241	Q24JQ0	296 aa		5.1	□□□□□ -1.59
CIT-213	ENST00000543324	ACOT6	Q3I5F7	207 aa	Predicted RBP	5.1	□□□□□ -1.59
CIT-213	ENST00000543324	SAXO1	Q8IYX7	474 aa		5.1	□□□□□ -1.59
CIT-213	ENST00000543324	PRR18	Q8N4B5	295 aa		5.1	□□□□□ -1.59
CIT-213	ENST00000543324	OR10J5	Q8NHC4	309 aa		5.1	□□□□□ -1.59
CIT-213	ENST00000543324	CORO2A	Q92828	525 aa		5.1	□□□□□ -1.59
CIT-213	ENST00000543324	SPSB1	Q96BD6	273 aa		5.1	□□□□□ -1.59
CIT-213	ENST00000543324	SNX22	Q96L94	193 aa		5.1	□□□□□ -1.59
CIT-213	ENST00000543324	ZNF2	Q9BSG1	426 aa	Predicted RBP	5.1	□□□□□ -1.59
CIT-213	ENST00000543324	WNT10A	Q9GZT5	417 aa		5.1	□□□□□ -1.59
CIT-213	ENST00000543324	LINC00574	Q9H8X3	128 aa		5.1	□□□□□ -1.59
CIT-213	ENST00000543324	LYRM2	Q9NU23	88 aa	Predicted RBP	5.1	□□□□□ -1.59
CIT-213	ENST00000543324	DNAH17	Q9UFH2	4485 aa		5.1	□□□□□ -1.59
CIT-213	ENST00000543324	ANXA10	Q9UJ72	324 aa		5.1	□□□□□ -1.59
CIT-213	ENST00000543324	SIGLEC9	Q9Y336	463 aa		5.1	□□□□□ -1.59
CIT-213	ENST00000543324	LSM4	Q9Y4Z0	139 aa	Known RBP	5.1	□□□□□ -1.59
CIT-213	ENST00000543324	IGHV2-26	A0A0B4J1V2	119 aa		5.09	□□□□□ -1.59
CIT-213	ENST00000543324	PIGBOS1	A0A0B4J2F0	54 aa		5.09	□□□□□ -1.59
CIT-213	ENST00000543324	MGST3	O14880	152 aa		5.09	□□□□□ -1.59
CIT-213	ENST00000543324	CRTAP	O75718	401 aa	Predicted RBP	5.09	□□□□□ -1.59
CIT-213	ENST00000543324	MMP23A	O75900	390 aa		5.09	□□□□□ -1.59
CIT-213	ENST00000543324	SCGB1D2	O95969	90 aa		5.09	□□□□□ -1.59
CIT-213	ENST00000543324	IGLV1-47	P01700	117 aa		5.09	□□□□□ -1.59
CIT-213	ENST00000543324	CGB3	P0DN86	165 aa		5.09	□□□□□ -1.59
CIT-213	ENST00000543324	CGB7	P0DN87	165 aa		5.09	□□□□□ -1.59
CIT-213	ENST00000543324	TMEM225B	P0DP42	221 aa		5.09	□□□□□ -1.59
CIT-213	ENST00000543324	ZNF25	P17030	456 aa	Predicted RBP	5.09	□□□□□ -1.59
CIT-213	ENST00000543324	OR3A4P	P47883	348 aa		5.09	□□□□□ -1.59
CIT-213	ENST00000543324	PIGP	P57054	158 aa		5.09	□□□□□ -1.59
CIT-213	ENST00000543324	FAM3B	P58499	235 aa	Predicted RBP	5.09	□□□□□ -1.59
CIT-213	ENST00000543324	TAS2R30	P59541	319 aa		5.09	□□□□□ -1.59
CIT-213	ENST00000543324	RPL23A	P62750	156 aa	Known RBP	5.09	□□□□□ -1.59
CIT-213	ENST00000543324	RAN	P62826	216 aa	Known RBP	5.09	□□□□□ -1.59
CIT-213	ENST00000543324	PDZD11	Q5EBL8	140 aa		5.09	□□□□□ -1.59
CIT-213	ENST00000543324	MINOS1	Q5TGZ0	78 aa		5.09	□□□□□ -1.59
CIT-213	ENST00000543324		Q6P435	159 aa		5.09	□□□□□ -1.59
CIT-213	ENST00000543324	FAM58A	Q8N1B3	248 aa		5.09	□□□□□ -1.59
CIT-213	ENST00000543324	BATF2	Q8N1L9	274 aa		5.09	□□□□□ -1.59
CIT-213	ENST00000543324	RPP25L	Q8N5L8	163 aa	Known RBP	5.09	□□□□□ -1.59
CIT-213	ENST00000543324	C11orf44	Q8N8P7	122 aa		5.09	□□□□□ -1.59
CIT-213	ENST00000543324	OR51T1	Q8NGJ9	327 aa		5.09	□□□□□ -1.59
CIT-213	ENST00000543324	OR4P4	Q8NGL7	312 aa		5.09	□□□□□ -1.59
CIT-213	ENST00000543324	OR4C13	Q8NGP0	309 aa		5.09	□□□□□ -1.59
CIT-213	ENST00000543324	BORCS8	Q96FH0	119 aa		5.09	□□□□□ -1.59
CIT-213	ENST00000543324	COQ2	Q96H96	371 aa		5.09	□□□□□ -1.59
CIT-213	ENST00000543324	ZNF714	Q96N38	554 aa		5.09	□□□□□ -1.59
CIT-213	ENST00000543324	C20orf144	Q9BQM9	153 aa		5.09	□□□□□ -1.59
CIT-213	ENST00000543324	PSMG3	Q9BT73	122 aa	Predicted RBP	5.09	□□□□□ -1.59
CIT-213	ENST00000543324	CABLES2	Q9BTV7	478 aa		5.09	□□□□□ -1.59
CIT-213	ENST00000543324	PARD6G	Q9BYG4	376 aa	Predicted RBP	5.09	□□□□□ -1.59
CIT-213	ENST00000543324		Q9N2K0	584 aa		5.09	□□□□□ -1.59
CIT-213	ENST00000543324	NAT8	Q9UHE5	227 aa		5.09	□□□□□ -1.59
CIT-213	ENST00000543324	SLC7A11	Q9UPY5	501 aa		5.09	□□□□□ -1.59
CIT-213	ENST00000543324	UBE2J1	Q9Y385	318 aa	Predicted RBP	5.09	□□□□□ -1.59
CIT-213	ENST00000543324	MINOS1-NBL1	R4GNA1	71 aa		5.09	□□□□□ -1.59

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