RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 MOSP00540 346 aa4.04□□□□□ -1.76
CLIP1-217ENST00000543205 CD3DP04234 171 aa4.04□□□□□ -1.76
CLIP1-217ENST00000543205 CT45A6P0DMU7 189 aa4.04□□□□□ -1.76
CLIP1-217ENST00000543205 CT45A5P0DMU8 189 aa4.04□□□□□ -1.76
CLIP1-217ENST00000543205 CT45A7P0DMV0 189 aa4.04□□□□□ -1.76
CLIP1-217ENST00000543205 IGKV1-13P0DP09 117 aa4.04□□□□□ -1.76
CLIP1-217ENST00000543205 ETV6P41212 452 aa4.04□□□□□ -1.76
CLIP1-217ENST00000543205 INPP1P49441 399 aa4.04□□□□□ -1.76
CLIP1-217ENST00000543205 UBE2KP61086 200 aa4.04□□□□□ -1.76
CLIP1-217ENST00000543205 ZNF45Q02386 682 aa4.04□□□□□ -1.76
CLIP1-217ENST00000543205 VAX1Q5SQQ9 334 aa4.04□□□□□ -1.76
CLIP1-217ENST00000543205 STEAP1BQ6NZ63 245 aa4.04□□□□□ -1.76
CLIP1-217ENST00000543205 C16orf82Q7Z2V1 217 aa4.04□□□□□ -1.76
CLIP1-217ENST00000543205 Q8N402 240 aa4.04□□□□□ -1.76
CLIP1-217ENST00000543205 NABP2Q9BQ15 211 aa4.04□□□□□ -1.76
CLIP1-217ENST00000543205 ZNF251Q9BRH9 671 aa4.04□□□□□ -1.76
CLIP1-217ENST00000543205 SLC25A33Q9BSK2 321 aa4.04□□□□□ -1.76
CLIP1-217ENST00000543205 OR51M1Q9H341 326 aa4.04□□□□□ -1.76
CLIP1-217ENST00000543205 SVEP1Q4LDE5 3571 aa4.03□□□□□ -1.76
CLIP1-217ENST00000543205 NCBP2LA6PVI3 153 aaKnown RBP4.03□□□□□ -1.76
CLIP1-217ENST00000543205 DISC1C4P0D8 188 aa4.03□□□□□ -1.76
CLIP1-217ENST00000543205 M0QZK8 103 aa4.03□□□□□ -1.76
CLIP1-217ENST00000543205 APOA2P02652 100 aa4.03□□□□□ -1.76
CLIP1-217ENST00000543205 CD74P04233 296 aa4.03□□□□□ -1.76
CLIP1-217ENST00000543205 AKAIN1P0CW23 69 aa4.03□□□□□ -1.76
CLIP1-217ENST00000543205 S100GP29377 79 aa4.03□□□□□ -1.76
CLIP1-217ENST00000543205 THBS3P49746 956 aa4.03□□□□□ -1.76
CLIP1-217ENST00000543205 AP3S2P59780 193 aa4.03□□□□□ -1.76
CLIP1-217ENST00000543205 EBI3Q14213 229 aa4.03□□□□□ -1.76
CLIP1-217ENST00000543205 ZNF79Q15937 498 aa4.03□□□□□ -1.76
CLIP1-217ENST00000543205 KRTAP24-1Q3LI83 254 aa4.03□□□□□ -1.76
CLIP1-217ENST00000543205 LRRC37A5PQ49AS3 106 aa4.03□□□□□ -1.76
CLIP1-217ENST00000543205 SCGB2B2Q4G0G5 96 aa4.03□□□□□ -1.76
CLIP1-217ENST00000543205 LPCAT3Q6P1A2 487 aa4.03□□□□□ -1.76
CLIP1-217ENST00000543205 CENPSQ8N2Z9 138 aa4.03□□□□□ -1.76
CLIP1-217ENST00000543205 TOMM5Q8N4H5 51 aa4.03□□□□□ -1.76
CLIP1-217ENST00000543205 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.03□□□□□ -1.76
CLIP1-217ENST00000543205 GDPD1Q8N9F7 314 aa4.03□□□□□ -1.76
CLIP1-217ENST00000543205 OR4C13Q8NGP0 309 aa4.03□□□□□ -1.76
CLIP1-217ENST00000543205 BORCS5Q969J3 196 aa4.03□□□□□ -1.76
CLIP1-217ENST00000543205 ADTRPQ96IZ2 230 aa4.03□□□□□ -1.76
CLIP1-217ENST00000543205 C19orf24Q9BVV8 132 aa4.03□□□□□ -1.76
CLIP1-217ENST00000543205 CCL28Q9NRJ3 127 aa4.03□□□□□ -1.76
CLIP1-217ENST00000543205 MOB4Q9Y3A3 225 aa4.03□□□□□ -1.76
CLIP1-217ENST00000543205 WASHC3Q9Y3C0 194 aa4.03□□□□□ -1.76
CLIP1-217ENST00000543205 ANKRD20A5PA0PJZ0 165 aa4.02□□□□□ -1.77
CLIP1-217ENST00000543205 H0YJW9 148 aa4.02□□□□□ -1.77
CLIP1-217ENST00000543205 TNFSF12O43508 249 aa4.02□□□□□ -1.77
CLIP1-217ENST00000543205 PROP1O75360 226 aa4.02□□□□□ -1.77
CLIP1-217ENST00000543205 HKR1P10072 659 aa4.02□□□□□ -1.77
CLIP1-217ENST00000543205 PGAM2P15259 253 aa4.02□□□□□ -1.77
CLIP1-217ENST00000543205 FAUP35544 74 aaKnown RBP4.02□□□□□ -1.77
CLIP1-217ENST00000543205 MSMO1Q15800 293 aa4.02□□□□□ -1.77
CLIP1-217ENST00000543205 RTL8BQ17RB0 113 aa4.02□□□□□ -1.77
CLIP1-217ENST00000543205 TRIQKQ629K1 86 aa4.02□□□□□ -1.77
CLIP1-217ENST00000543205 ZNF57Q68EA5 555 aaPredicted RBP4.02□□□□□ -1.77
CLIP1-217ENST00000543205 ZNF660Q6AZW8 331 aaPredicted RBP4.02□□□□□ -1.77
CLIP1-217ENST00000543205 ZNF66Q6ZN08 573 aa4.02□□□□□ -1.77
CLIP1-217ENST00000543205 LINC00299Q6ZSB3 139 aa4.02□□□□□ -1.77
CLIP1-217ENST00000543205 CMTM1Q8IZ96 169 aa4.02□□□□□ -1.77
CLIP1-217ENST00000543205 ARRDC1Q8N5I2 433 aa4.02□□□□□ -1.77
CLIP1-217ENST00000543205 ZNF383Q8NA42 475 aa4.02□□□□□ -1.77
CLIP1-217ENST00000543205 INO80EQ8NBZ0 244 aaPredicted RBP4.02□□□□□ -1.77
CLIP1-217ENST00000543205 OR4D10Q8NGI6 311 aa4.02□□□□□ -1.77
CLIP1-217ENST00000543205 OR4F5Q8NH21 305 aa4.02□□□□□ -1.77
CLIP1-217ENST00000543205 TCTEX1D2Q8WW35 142 aa4.02□□□□□ -1.77
CLIP1-217ENST00000543205 S100ZQ8WXG8 99 aa4.02□□□□□ -1.77
CLIP1-217ENST00000543205 FLYWCH2Q96CP2 140 aaKnown RBP4.02□□□□□ -1.77
CLIP1-217ENST00000543205 HSD17B10Q99714 261 aaKnown RBP4.02□□□□□ -1.77
CLIP1-217ENST00000543205 RASL11BQ9BPW5 248 aa4.02□□□□□ -1.77
CLIP1-217ENST00000543205 AIFM2Q9BRQ8 373 aa4.02□□□□□ -1.77
CLIP1-217ENST00000543205 MCUBQ9NWR8 336 aa4.02□□□□□ -1.77
CLIP1-217ENST00000543205 PRELID3BQ9Y3B1 194 aa4.02□□□□□ -1.77
CLIP1-217ENST00000543205 ANK3Q12955 4377 aaKnown RBP4.02□□□□□ -1.77
CLIP1-217ENST00000543205 GPR31O00270 319 aa4.02□□□□□ -1.77
CLIP1-217ENST00000543205 IGLV2-14P01704 120 aa4.02□□□□□ -1.77
CLIP1-217ENST00000543205 HLA-GP17693 338 aa4.02□□□□□ -1.77
CLIP1-217ENST00000543205 GNRHRP30968 328 aa4.02□□□□□ -1.77
CLIP1-217ENST00000543205 RPL13AP40429 203 aaKnown RBP4.02□□□□□ -1.77
CLIP1-217ENST00000543205 KIR2DS2P43631 304 aa4.02□□□□□ -1.77
CLIP1-217ENST00000543205 LINC00205P59089 165 aa4.02□□□□□ -1.77
CLIP1-217ENST00000543205 RAB14P61106 215 aa4.02□□□□□ -1.77
CLIP1-217ENST00000543205 CATR1Q13166 79 aa4.02□□□□□ -1.77
CLIP1-217ENST00000543205 OPCMLQ14982 345 aa4.02□□□□□ -1.77
CLIP1-217ENST00000543205 PLGLAQ15195 96 aa4.02□□□□□ -1.77
CLIP1-217ENST00000543205 MMDQ15546 238 aa4.02□□□□□ -1.77
CLIP1-217ENST00000543205 ABCA11PQ4W5N1 156 aa4.02□□□□□ -1.77
CLIP1-217ENST00000543205 AADACL3Q5VUY0 350 aa4.02□□□□□ -1.77
CLIP1-217ENST00000543205 IGFL4Q6B9Z1 124 aa4.02□□□□□ -1.77
CLIP1-217ENST00000543205 FAAP20Q6NZ36 180 aa4.02□□□□□ -1.77
CLIP1-217ENST00000543205 ZNF818PQ6ZRF7 136 aa4.02□□□□□ -1.77
CLIP1-217ENST00000543205 PDPNQ86YL7 162 aa4.02□□□□□ -1.77
CLIP1-217ENST00000543205 Q8N6K4 173 aa4.02□□□□□ -1.77
CLIP1-217ENST00000543205 ZNF680Q8NEM1 530 aa4.02□□□□□ -1.77
CLIP1-217ENST00000543205 OR4F17Q8NGA8 305 aa4.02□□□□□ -1.77
CLIP1-217ENST00000543205 OR4C16Q8NGL9 310 aa4.02□□□□□ -1.77
CLIP1-217ENST00000543205 TERB2Q8NHR7 220 aa4.02□□□□□ -1.77
CLIP1-217ENST00000543205 ZFAND1Q8TCF1 268 aa4.02□□□□□ -1.77
CLIP1-217ENST00000543205 TAF15Q92804 592 aaKnown RBP eCLIP4.02□□□□□ -1.77
CLIP1-217ENST00000543205 RBMXL1Q96E39 390 aaKnown RBP4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms