RNA–Protein interactions for RNA: ENST00000543004.5

OTUB1-211, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 5 BASIC

Gene OTUB1, Length 1,647 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-211ENST00000543004 NECAP1Q8NC96 275 aa16.12■□□□□ 0.17
OTUB1-211ENST00000543004 PPP1R1CQ8WVI7 109 aa16.12■□□□□ 0.17
OTUB1-211ENST00000543004 PINX1Q96BK5 328 aaKnown RBP16.12■□□□□ 0.17
OTUB1-211ENST00000543004 ZNF436Q9C0F3 470 aaPredicted RBP16.12■□□□□ 0.17
OTUB1-211ENST00000543004 C11orf1Q9H5F2 150 aa16.12■□□□□ 0.17
OTUB1-211ENST00000543004 TSSC4Q9Y5U2 329 aaPredicted RBP16.12■□□□□ 0.17
OTUB1-211ENST00000543004 TRRAPQ9Y4A5 3859 aa16.12■□□□□ 0.17
OTUB1-211ENST00000543004 C15orf62A8K5M9 175 aa16.12■□□□□ 0.17
OTUB1-211ENST00000543004 H0YIZ8 118 aa16.12■□□□□ 0.17
OTUB1-211ENST00000543004 C2orf83Q53S99 150 aa16.12■□□□□ 0.17
OTUB1-211ENST00000543004 SPANXN5Q5MJ07 72 aa16.12■□□□□ 0.17
OTUB1-211ENST00000543004 PVRIGQ6DKI7 326 aa16.12■□□□□ 0.17
OTUB1-211ENST00000543004 KLHL30-AS1Q8NEE0 82 aa16.12■□□□□ 0.17
OTUB1-211ENST00000543004 UBE2E2Q96LR5 201 aa16.12■□□□□ 0.17
OTUB1-211ENST00000543004 PSENENQ9NZ42 101 aa16.12■□□□□ 0.17
OTUB1-211ENST00000543004 PAIP2BQ9ULR5 123 aaKnown RBP16.12■□□□□ 0.17
OTUB1-211ENST00000543004 U3KQ87 197 aa16.12■□□□□ 0.17
OTUB1-211ENST00000543004 K7EIM0 57 aa16.11■□□□□ 0.17
OTUB1-211ENST00000543004 HIST1H1BP16401 226 aaKnown RBP16.11■□□□□ 0.17
OTUB1-211ENST00000543004 CDX1P47902 265 aaPredicted RBP16.11■□□□□ 0.17
OTUB1-211ENST00000543004 CYCSP99999 105 aaKnown RBP16.11■□□□□ 0.17
OTUB1-211ENST00000543004 DEFB136Q30KP8 78 aa16.11■□□□□ 0.17
OTUB1-211ENST00000543004 C8orf86Q6ZUL3 223 aa16.11■□□□□ 0.17
OTUB1-211ENST00000543004 CIB3Q96Q77 187 aaPredicted RBP16.11■□□□□ 0.17
OTUB1-211ENST00000543004 ZFP57Q9NU63 452 aa16.11■□□□□ 0.17
OTUB1-211ENST00000543004 OR5AC2Q9NZP5 309 aa16.11■□□□□ 0.17
OTUB1-211ENST00000543004 FAM223BA6NKX1 122 aa16.1■□□□□ 0.17
OTUB1-211ENST00000543004 MT-CO2P00403 227 aa16.1■□□□□ 0.17
OTUB1-211ENST00000543004 SUB1P53999 127 aaKnown RBP eCLIP16.1■□□□□ 0.17
OTUB1-211ENST00000543004 ATP5G2Q06055 141 aa16.1■□□□□ 0.17
OTUB1-211ENST00000543004 FAM223AQ8IWN6 122 aa16.1■□□□□ 0.17
OTUB1-211ENST00000543004 SMIM8Q96KF7 97 aa16.1■□□□□ 0.17
OTUB1-211ENST00000543004 DUX3Q96PT4 197 aa16.1■□□□□ 0.17
OTUB1-211ENST00000543004 RAB40CQ96S21 281 aa16.1■□□□□ 0.17
OTUB1-211ENST00000543004 FNDC4Q9H6D8 234 aaPredicted RBP16.1■□□□□ 0.17
OTUB1-211ENST00000543004 I3L2K1 104 aa16.09■□□□□ 0.17
OTUB1-211ENST00000543004 CCNKO75909 580 aa16.09■□□□□ 0.17
OTUB1-211ENST00000543004 TRBV12-3P01733 135 aa16.09■□□□□ 0.17
OTUB1-211ENST00000543004 EXOSC2Q13868 293 aaKnown RBP16.09■□□□□ 0.17
OTUB1-211ENST00000543004 Q5BKY6 102 aa16.09■□□□□ 0.17
OTUB1-211ENST00000543004 SHISA2Q6UWI4 295 aa16.09■□□□□ 0.17
OTUB1-211ENST00000543004 OR1L6Q8NGR2 347 aa16.09■□□□□ 0.17
OTUB1-211ENST00000543004 SCARB1Q8WTV0 552 aa16.09■□□□□ 0.17
OTUB1-211ENST00000543004 USMG5Q96IX5 58 aa16.09■□□□□ 0.17
OTUB1-211ENST00000543004 ANKRD34BA5PLL1 514 aa16.08■□□□□ 0.17
OTUB1-211ENST00000543004 NUDT19A8MXV4 375 aa16.08■□□□□ 0.17
OTUB1-211ENST00000543004 DEDDO75618 318 aa16.08■□□□□ 0.17
OTUB1-211ENST00000543004 MPC2O95563 127 aa16.08■□□□□ 0.17
OTUB1-211ENST00000543004 NDUFA11Q86Y39 141 aa16.08■□□□□ 0.17
OTUB1-211ENST00000543004 RNF126Q9BV68 326 aa16.08■□□□□ 0.17
OTUB1-211ENST00000543004 THYN1Q9P016 225 aa16.08■□□□□ 0.17
OTUB1-211ENST00000543004 MRPL36Q9P0J6 103 aaKnown RBP16.08■□□□□ 0.17
OTUB1-211ENST00000543004 DNHD1Q96M86 4753 aa16.08■□□□□ 0.16
OTUB1-211ENST00000543004 WNK1Q9H4A3 2382 aa16.08■□□□□ 0.16
OTUB1-211ENST00000543004 A0A0G2JLM5 398 aa16.08■□□□□ 0.16
OTUB1-211ENST00000543004 I3L521 148 aa16.08■□□□□ 0.16
OTUB1-211ENST00000543004 L7N2F9 121 aa16.08■□□□□ 0.16
OTUB1-211ENST00000543004 CYB5BO43169 146 aa16.08■□□□□ 0.16
OTUB1-211ENST00000543004 VAMP2P63027 116 aa16.08■□□□□ 0.16
OTUB1-211ENST00000543004 CCDC140Q96MF4 163 aa16.08■□□□□ 0.16
OTUB1-211ENST00000543004 STRAPQ9Y3F4 350 aaKnown RBP16.08■□□□□ 0.16
OTUB1-211ENST00000543004 TRAV14DV4A0A0A6YYC5 116 aa16.07■□□□□ 0.16
OTUB1-211ENST00000543004 FAM24AA6NFZ4 105 aa16.07■□□□□ 0.16
OTUB1-211ENST00000543004 IFNA4P05014 189 aa16.07■□□□□ 0.16
OTUB1-211ENST00000543004 GIPP09681 153 aaPredicted RBP16.07■□□□□ 0.16
OTUB1-211ENST00000543004 OPRK1P41145 380 aa16.07■□□□□ 0.16
OTUB1-211ENST00000543004 ZNF343Q6P1L6 599 aa16.07■□□□□ 0.16
OTUB1-211ENST00000543004 C4orf3Q8WVX3 66 aa16.07■□□□□ 0.16
OTUB1-211ENST00000543004 LGALS1P09382 135 aaKnown RBP16.06■□□□□ 0.16
OTUB1-211ENST00000543004 OR8U8P0C7N1 319 aa16.06■□□□□ 0.16
OTUB1-211ENST00000543004 METTL15P1P0C7V9 234 aa16.06■□□□□ 0.16
OTUB1-211ENST00000543004 ETV3LQ6ZN32 361 aa16.06■□□□□ 0.16
OTUB1-211ENST00000543004 ZC4H2Q9NQZ6 224 aa16.06■□□□□ 0.16
OTUB1-211ENST00000543004 PMS2P5A8MQ11 134 aa16.05■□□□□ 0.16
OTUB1-211ENST00000543004 F8W735 103 aaPredicted RBP16.05■□□□□ 0.16
OTUB1-211ENST00000543004 TSC22D2O75157 780 aa16.05■□□□□ 0.16
OTUB1-211ENST00000543004 BCAP31P51572 246 aa16.05■□□□□ 0.16
OTUB1-211ENST00000543004 CAV2P51636 162 aa16.05■□□□□ 0.16
OTUB1-211ENST00000543004 TAS2R30P59541 319 aa16.05■□□□□ 0.16
OTUB1-211ENST00000543004 TMEM14EPQ6UXP3 125 aa16.05■□□□□ 0.16
OTUB1-211ENST00000543004 CLEC19AQ6UXS0 136 aa16.05■□□□□ 0.16
OTUB1-211ENST00000543004 UBAC2Q8NBM4 344 aa16.05■□□□□ 0.16
OTUB1-211ENST00000543004 ZNF502Q8TBZ5 544 aa16.05■□□□□ 0.16
OTUB1-211ENST00000543004 EEF1AKMT3Q96AZ1 226 aa16.05■□□□□ 0.16
OTUB1-211ENST00000543004 RAX2Q96IS3 184 aa16.05■□□□□ 0.16
OTUB1-211ENST00000543004 PRSS46E5RG02 174 aa16.05■□□□□ 0.16
OTUB1-211ENST00000543004 PPP5D1E7EU14 171 aa16.05■□□□□ 0.16
OTUB1-211ENST00000543004 SMLR1H3BR10 107 aa16.05■□□□□ 0.16
OTUB1-211ENST00000543004 PVALBP20472 110 aaPredicted RBP16.05■□□□□ 0.16
OTUB1-211ENST00000543004 OR8G2PQ6IF36 304 aa16.05■□□□□ 0.16
OTUB1-211ENST00000543004 HAPLN4Q86UW8 402 aa16.05■□□□□ 0.16
OTUB1-211ENST00000543004 RNASEH2CQ8TDP1 164 aaKnown RBP16.05■□□□□ 0.16
OTUB1-211ENST00000543004 VN1R17PQ8TDU5 208 aa16.05■□□□□ 0.16
OTUB1-211ENST00000543004 CXorf58Q96LI9 332 aa16.05■□□□□ 0.16
OTUB1-211ENST00000543004 C21orf62Q9NYP8 219 aa16.05■□□□□ 0.16
OTUB1-211ENST00000543004 MBD2Q9UBB5 411 aa16.05■□□□□ 0.16
OTUB1-211ENST00000543004 IGHV4OR15-8A0A075B7B6 117 aa16.04■□□□□ 0.16
OTUB1-211ENST00000543004 A0A087WW49 117 aa16.04■□□□□ 0.16
OTUB1-211ENST00000543004 CORTO00230 105 aa16.04■□□□□ 0.16
OTUB1-211ENST00000543004 RLN2P04090 185 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms