RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-223ENST00000542838 PPP1R14DQ9NXH3 145 aa10.55□□□□□ -0.72
DDX11-223ENST00000542838 DPRXA6NFQ7 191 aa10.54□□□□□ -0.72
DDX11-223ENST00000542838 SRRM4A7MD48 611 aaKnown RBP10.54□□□□□ -0.72
DDX11-223ENST00000542838 C2orf83Q53S99 150 aa10.54□□□□□ -0.72
DDX11-223ENST00000542838 HES3Q5TGS1 186 aa10.54□□□□□ -0.72
DDX11-223ENST00000542838 VHLLQ6RSH7 139 aa10.54□□□□□ -0.72
DDX11-223ENST00000542838 Q6ZN92 141 aa10.54□□□□□ -0.72
DDX11-223ENST00000542838 ZNF439Q8NDP4 499 aa10.54□□□□□ -0.72
DDX11-223ENST00000542838 PRO3102Q9H379 93 aa10.54□□□□□ -0.72
DDX11-223ENST00000542838 PPIAL4AQ9Y536 164 aa10.54□□□□□ -0.72
DDX11-223ENST00000542838 PRRC2CQ9Y520 2896 aaKnown RBP10.54□□□□□ -0.72
DDX11-223ENST00000542838 TRAV5A0A0B4J249 113 aa10.54□□□□□ -0.72
DDX11-223ENST00000542838 PRR33A8MZF0 331 aa10.54□□□□□ -0.72
DDX11-223ENST00000542838 IGKV1-16P04430 117 aa10.54□□□□□ -0.72
DDX11-223ENST00000542838 IGLC2P0DOY2 106 aa10.54□□□□□ -0.72
DDX11-223ENST00000542838 IGLC3P0DOY3 106 aa10.54□□□□□ -0.72
DDX11-223ENST00000542838 CHRNB4P30926 498 aa10.54□□□□□ -0.72
DDX11-223ENST00000542838 CCL11P51671 97 aa10.54□□□□□ -0.72
DDX11-223ENST00000542838 C11orf42Q8N5U0 333 aa10.54□□□□□ -0.72
DDX11-223ENST00000542838 FAM168AQ92567 244 aa10.54□□□□□ -0.72
DDX11-223ENST00000542838 ZNF71Q9NQZ8 489 aaPredicted RBP10.54□□□□□ -0.72
DDX11-223ENST00000542838 PROCRQ9UNN8 238 aa10.54□□□□□ -0.72
DDX11-223ENST00000542838 HYPMO75409 117 aa10.54□□□□□ -0.72
DDX11-223ENST00000542838 LHBP01229 141 aa10.54□□□□□ -0.72
DDX11-223ENST00000542838 UBE2L3P68036 154 aaKnown RBP10.54□□□□□ -0.72
DDX11-223ENST00000542838 DMRTA1Q5VZB9 504 aa10.54□□□□□ -0.72
DDX11-223ENST00000542838 PNKDQ8N490 385 aa10.54□□□□□ -0.72
DDX11-223ENST00000542838 LINC00479Q96M42 142 aa10.54□□□□□ -0.72
DDX11-223ENST00000542838 MMP23AO75900 390 aa10.53□□□□□ -0.72
DDX11-223ENST00000542838 REG1AP05451 166 aa10.53□□□□□ -0.72
DDX11-223ENST00000542838 CT45A6P0DMU7 189 aa10.53□□□□□ -0.72
DDX11-223ENST00000542838 CT45A5P0DMU8 189 aa10.53□□□□□ -0.72
DDX11-223ENST00000542838 CT45A7P0DMV0 189 aa10.53□□□□□ -0.72
DDX11-223ENST00000542838 RNASE2P10153 161 aaKnown RBP10.53□□□□□ -0.72
DDX11-223ENST00000542838 HNRNPA3P51991 378 aaKnown RBP10.53□□□□□ -0.72
DDX11-223ENST00000542838 SLAQ13239 276 aa10.53□□□□□ -0.72
DDX11-223ENST00000542838 MORN5Q5VZ52 161 aa10.53□□□□□ -0.72
DDX11-223ENST00000542838 C19orf35Q6ZS72 473 aa10.53□□□□□ -0.72
DDX11-223ENST00000542838 DEFB108BQ8NET1 73 aa10.53□□□□□ -0.72
DDX11-223ENST00000542838 OR10W1Q8NGF6 305 aa10.53□□□□□ -0.72
DDX11-223ENST00000542838 NCOR1P1Q9H4R4 102 aa10.53□□□□□ -0.72
DDX11-223ENST00000542838 ZFP30Q9Y2G7 519 aa10.53□□□□□ -0.72
DDX11-223ENST00000542838 SLC25A15Q9Y619 301 aa10.53□□□□□ -0.72
DDX11-223ENST00000542838 CADP27708 2225 aa10.53□□□□□ -0.72
DDX11-223ENST00000542838 M0R1B8 84 aa10.53□□□□□ -0.72
DDX11-223ENST00000542838 CD69Q07108 199 aa10.53□□□□□ -0.72
DDX11-223ENST00000542838 ATOH7Q8N100 152 aa10.53□□□□□ -0.72
DDX11-223ENST00000542838 C18orf32Q8TCD1 76 aa10.53□□□□□ -0.72
DDX11-223ENST00000542838 SARAFQ96BY9 339 aa10.53□□□□□ -0.72
DDX11-223ENST00000542838 COMMD5Q9GZQ3 224 aa10.53□□□□□ -0.72
DDX11-223ENST00000542838 GPR179Q6PRD1 2367 aa10.53□□□□□ -0.72
DDX11-223ENST00000542838 SIAH2O43255 324 aa10.52□□□□□ -0.72
DDX11-223ENST00000542838 KLF3P57682 345 aaPredicted RBP10.52□□□□□ -0.72
DDX11-223ENST00000542838 OR1L8Q8NGR8 309 aa10.52□□□□□ -0.72
DDX11-223ENST00000542838 SLC25A2Q9BXI2 301 aa10.52□□□□□ -0.72
DDX11-223ENST00000542838 MRPL32Q9BYC8 188 aaKnown RBP10.52□□□□□ -0.72
DDX11-223ENST00000542838 ZNRD1Q9P1U0 126 aa10.52□□□□□ -0.72
DDX11-223ENST00000542838 SAA1P0DJI8 122 aaPredicted RBP10.52□□□□□ -0.73
DDX11-223ENST00000542838 SFTPCP11686 197 aa10.52□□□□□ -0.73
DDX11-223ENST00000542838 STPG4Q8N801 248 aa10.52□□□□□ -0.73
DDX11-223ENST00000542838 RND1Q92730 232 aa10.52□□□□□ -0.73
DDX11-223ENST00000542838 FAM167A-AS1Q96KT0 104 aa10.52□□□□□ -0.73
DDX11-223ENST00000542838 CACNA1GO43497 2377 aa10.52□□□□□ -0.73
DDX11-223ENST00000542838 RAI1Q7Z5J4 1906 aaPredicted RBP10.52□□□□□ -0.73
DDX11-223ENST00000542838 TRAV34A0A0B4J273 112 aa10.52□□□□□ -0.73
DDX11-223ENST00000542838 ATP5IP56385 69 aaPredicted RBP10.52□□□□□ -0.73
DDX11-223ENST00000542838 RELQ04864 619 aaPredicted RBP10.52□□□□□ -0.73
DDX11-223ENST00000542838 KLHDC1Q8N7A1 406 aa10.52□□□□□ -0.73
DDX11-223ENST00000542838 FDCSPQ8NFU4 85 aa10.52□□□□□ -0.73
DDX11-223ENST00000542838 OR2T6Q8NHC8 308 aa10.52□□□□□ -0.73
DDX11-223ENST00000542838 DNAJC4Q9NNZ3 241 aa10.52□□□□□ -0.73
DDX11-223ENST00000542838 ZNF355PQ9NSJ1 428 aa10.52□□□□□ -0.73
DDX11-223ENST00000542838 DCAF16Q9NXF7 216 aa10.52□□□□□ -0.73
DDX11-223ENST00000542838 LAMTOR2Q9Y2Q5 125 aa10.52□□□□□ -0.73
DDX11-223ENST00000542838 MFAP2P55001 183 aa10.51□□□□□ -0.73
DDX11-223ENST00000542838 SELENOVP59797 346 aa10.51□□□□□ -0.73
DDX11-223ENST00000542838 STUMQ69YW2 141 aa10.51□□□□□ -0.73
DDX11-223ENST00000542838 OR5B3Q8NH48 314 aa10.51□□□□□ -0.73
DDX11-223ENST00000542838 CLEC7AQ9BXN2 247 aa10.51□□□□□ -0.73
DDX11-223ENST00000542838 MRPL27Q9P0M9 148 aaKnown RBP10.51□□□□□ -0.73
DDX11-223ENST00000542838 AMMECR1Q9Y4X0 333 aaPredicted RBP10.51□□□□□ -0.73
DDX11-223ENST00000542838 CDX4O14627 284 aaPredicted RBP10.51□□□□□ -0.73
DDX11-223ENST00000542838 TCF21O43680 179 aa10.51□□□□□ -0.73
DDX11-223ENST00000542838 PYYP10082 97 aa10.51□□□□□ -0.73
DDX11-223ENST00000542838 CCL13Q99616 98 aa10.51□□□□□ -0.73
DDX11-223ENST00000542838 BET1LQ9NYM9 111 aa10.51□□□□□ -0.73
DDX11-223ENST00000542838 RNF7Q9UBF6 113 aa10.51□□□□□ -0.73
DDX11-223ENST00000542838 ICE1Q9Y2F5 2266 aa10.5□□□□□ -0.73
DDX11-223ENST00000542838 PSMB11A5LHX3 300 aa10.5□□□□□ -0.73
DDX11-223ENST00000542838 NKX2-8O15522 239 aa10.5□□□□□ -0.73
DDX11-223ENST00000542838 TNXAQ16473 311 aa10.5□□□□□ -0.73
DDX11-223ENST00000542838 LCN12Q6JVE5 192 aa10.5□□□□□ -0.73
DDX11-223ENST00000542838 SLC25A48Q6ZT89 311 aaKnown RBP10.5□□□□□ -0.73
DDX11-223ENST00000542838 FAM222BQ8WU58 562 aa10.5□□□□□ -0.73
DDX11-223ENST00000542838 HSBP1O75506 76 aa10.5□□□□□ -0.73
DDX11-223ENST00000542838 SSBP2P81877 361 aaPredicted RBP10.5□□□□□ -0.73
DDX11-223ENST00000542838 TBR1Q16650 682 aa10.5□□□□□ -0.73
DDX11-223ENST00000542838 MAJINQ3KP22 176 aa10.5□□□□□ -0.73
DDX11-223ENST00000542838 PRR27Q6MZM9 219 aa10.5□□□□□ -0.73
DDX11-223ENST00000542838 SPACA3Q8IXA5 215 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms