RNA–Protein interactions for RNA: ENST00000542830.5

LTBR-210, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-210ENST00000542830 SCAF4O95104 1147 aaKnown RBP13.1□□□□□ -0.31
LTBR-210ENST00000542830 IFNA17P01571 189 aa13.1□□□□□ -0.31
LTBR-210ENST00000542830 IZUMO4Q1ZYL8 232 aa13.1□□□□□ -0.31
LTBR-210ENST00000542830 SP6Q3SY56 376 aa13.1□□□□□ -0.31
LTBR-210ENST00000542830 FAAP20Q6NZ36 180 aa13.1□□□□□ -0.31
LTBR-210ENST00000542830 RNASE11Q8TAA1 199 aaKnown RBP13.1□□□□□ -0.31
LTBR-210ENST00000542830 ISOC1Q96CN7 298 aa13.1□□□□□ -0.31
LTBR-210ENST00000542830 PRRT1Q99946 306 aa13.1□□□□□ -0.31
LTBR-210ENST00000542830 SLIRPQ9GZT3 109 aaKnown RBP13.1□□□□□ -0.31
LTBR-210ENST00000542830 TEX13DA0A0J9YY54 714 aaPredicted RBP13.09□□□□□ -0.31
LTBR-210ENST00000542830 ST8SIA3O43173 380 aa13.09□□□□□ -0.31
LTBR-210ENST00000542830 GSTZ1O43708 216 aaPredicted RBP13.09□□□□□ -0.31
LTBR-210ENST00000542830 MT-CO2P00403 227 aa13.09□□□□□ -0.31
LTBR-210ENST00000542830 CTSGP08311 255 aa13.09□□□□□ -0.31
LTBR-210ENST00000542830 ADMP35318 185 aa13.09□□□□□ -0.31
LTBR-210ENST00000542830 SNCAP37840 140 aa13.09□□□□□ -0.31
LTBR-210ENST00000542830 SUB1P53999 127 aaKnown RBP eCLIP13.09□□□□□ -0.31
LTBR-210ENST00000542830 LAMTOR1Q6IAA8 161 aa13.09□□□□□ -0.31
LTBR-210ENST00000542830 FAM219AQ8IW50 185 aa13.09□□□□□ -0.31
LTBR-210ENST00000542830 OR4C16Q8NGL9 310 aa13.09□□□□□ -0.31
LTBR-210ENST00000542830 SPAG8Q99932 426 aaPredicted RBP13.09□□□□□ -0.31
LTBR-210ENST00000542830 C20orf24Q9BUV8 137 aa13.09□□□□□ -0.31
LTBR-210ENST00000542830 WFDC10AQ9H1F0 79 aa13.09□□□□□ -0.31
LTBR-210ENST00000542830 NAA60Q9H7X0 242 aa13.09□□□□□ -0.31
LTBR-210ENST00000542830 SELENOKQ9Y6D0 94 aa13.09□□□□□ -0.31
LTBR-210ENST00000542830 RBMY1BA6NDE4 496 aaKnown RBP13.08□□□□□ -0.32
LTBR-210ENST00000542830 RBMY1EA6NEQ0 496 aaKnown RBP13.08□□□□□ -0.32
LTBR-210ENST00000542830 CDS2O95674 445 aa13.08□□□□□ -0.32
LTBR-210ENST00000542830 OR5AC1P0C628 307 aa13.08□□□□□ -0.32
LTBR-210ENST00000542830 RBMY1DP0C7P1 496 aaKnown RBP13.08□□□□□ -0.32
LTBR-210ENST00000542830 LYL1P12980 280 aa13.08□□□□□ -0.32
LTBR-210ENST00000542830 DHODHQ02127 395 aa13.08□□□□□ -0.32
LTBR-210ENST00000542830 PINX1Q96BK5 328 aaKnown RBP13.08□□□□□ -0.32
LTBR-210ENST00000542830 RTBDNQ9BSG5 229 aaPredicted RBP13.08□□□□□ -0.32
LTBR-210ENST00000542830 TMEM222Q9H0R3 208 aa13.08□□□□□ -0.32
LTBR-210ENST00000542830 HIPK2Q9H2X6 1198 aa13.08□□□□□ -0.32
LTBR-210ENST00000542830 EDA2RQ9HAV5 297 aa13.08□□□□□ -0.32
LTBR-210ENST00000542830 ENY2Q9NPA8 101 aa13.08□□□□□ -0.32
LTBR-210ENST00000542830 DNAH7Q8WXX0 4024 aa13.07□□□□□ -0.32
LTBR-210ENST00000542830 ANKRD20A5PA0PJZ0 165 aa13.07□□□□□ -0.32
LTBR-210ENST00000542830 FABP12A6NFH5 140 aa13.07□□□□□ -0.32
LTBR-210ENST00000542830 CORTO00230 105 aa13.07□□□□□ -0.32
LTBR-210ENST00000542830 TSPAN4O14817 238 aa13.07□□□□□ -0.32
LTBR-210ENST00000542830 HOXA1P49639 335 aaPredicted RBP13.07□□□□□ -0.32
LTBR-210ENST00000542830 SPINK9Q5DT21 86 aa13.07□□□□□ -0.32
LTBR-210ENST00000542830 CASC10Q5T4H9 136 aa13.07□□□□□ -0.32
LTBR-210ENST00000542830 MCFD2Q8NI22 146 aa13.07□□□□□ -0.32
LTBR-210ENST00000542830 RBPMSQ93062 196 aaKnown RBP13.07□□□□□ -0.32
LTBR-210ENST00000542830 SCGB3A2Q96PL1 93 aa13.07□□□□□ -0.32
LTBR-210ENST00000542830 NXF2Q9GZY0 626 aaKnown RBP13.07□□□□□ -0.32
LTBR-210ENST00000542830 SCP2D1Q9UJQ7 156 aa13.07□□□□□ -0.32
LTBR-210ENST00000542830 GPR132Q9UNW8 380 aa13.07□□□□□ -0.32
LTBR-210ENST00000542830 NBEAL2Q6ZNJ1 2754 aa13.06□□□□□ -0.32
LTBR-210ENST00000542830 GNG7O60262 68 aa13.06□□□□□ -0.32
LTBR-210ENST00000542830 TNFSF8P32971 234 aa13.06□□□□□ -0.32
LTBR-210ENST00000542830 NPBWR1P48145 328 aa13.06□□□□□ -0.32
LTBR-210ENST00000542830 DUSP18Q8NEJ0 188 aa13.06□□□□□ -0.32
LTBR-210ENST00000542830 OR51S1Q8NGJ8 323 aa13.06□□□□□ -0.32
LTBR-210ENST00000542830 GLYATL2Q8WU03 294 aa13.06□□□□□ -0.32
LTBR-210ENST00000542830 SOSTQ9BQB4 213 aa13.06□□□□□ -0.32
LTBR-210ENST00000542830 A0A0G2JRQ6 117 aa13.05□□□□□ -0.32
LTBR-210ENST00000542830 CRYM-AS1A6NIL9 109 aa13.05□□□□□ -0.32
LTBR-210ENST00000542830 YIF1AO95070 293 aa13.05□□□□□ -0.32
LTBR-210ENST00000542830 ETV6P41212 452 aa13.05□□□□□ -0.32
LTBR-210ENST00000542830 AARDQ4LEZ3 155 aa13.05□□□□□ -0.32
LTBR-210ENST00000542830 PVRIGQ6DKI7 326 aa13.05□□□□□ -0.32
LTBR-210ENST00000542830 OR52E5Q8NH55 327 aa13.05□□□□□ -0.32
LTBR-210ENST00000542830 OR10C1Q96KK4 312 aa13.05□□□□□ -0.32
LTBR-210ENST00000542830 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.05□□□□□ -0.32
LTBR-210ENST00000542830 SMPXQ9UHP9 88 aa13.05□□□□□ -0.32
LTBR-210ENST00000542830 IGHV3OR16-8A0A075B7F1 116 aa13.04□□□□□ -0.32
LTBR-210ENST00000542830 LOC102724200A0A096LPH7 203 aaPredicted RBP13.04□□□□□ -0.32
LTBR-210ENST00000542830 ZNF207O43670 478 aaKnown RBP13.04□□□□□ -0.32
LTBR-210ENST00000542830 RNASE2P10153 161 aaKnown RBP13.04□□□□□ -0.32
LTBR-210ENST00000542830 SPCS3P61009 180 aa13.04□□□□□ -0.32
LTBR-210ENST00000542830 SELENOHQ8IZQ5 122 aaKnown RBP13.04□□□□□ -0.32
LTBR-210ENST00000542830 TMEM116Q8NCL8 245 aa13.04□□□□□ -0.32
LTBR-210ENST00000542830 GINS3Q9BRX5 216 aa13.04□□□□□ -0.32
LTBR-210ENST00000542830 GGTLC1Q9BX51 225 aa13.04□□□□□ -0.32
LTBR-210ENST00000542830 MCUBQ9NWR8 336 aa13.04□□□□□ -0.32
LTBR-210ENST00000542830 CACFD1Q9UGQ2 172 aa13.04□□□□□ -0.32
LTBR-210ENST00000542830 KCNIP3Q9Y2W7 256 aa13.04□□□□□ -0.32
LTBR-210ENST00000542830 TRAV14DV4A0A0A6YYC5 116 aa13.03□□□□□ -0.32
LTBR-210ENST00000542830 IGHV7-4-1A0A0J9YVY3 117 aa13.03□□□□□ -0.32
LTBR-210ENST00000542830 OR4C46A6NHA9 309 aa13.03□□□□□ -0.32
LTBR-210ENST00000542830 SCGB2A1O75556 95 aa13.03□□□□□ -0.32
LTBR-210ENST00000542830 IGHV3-48P01763 117 aa13.03□□□□□ -0.32
LTBR-210ENST00000542830 BMI1P35226 326 aa13.03□□□□□ -0.32
LTBR-210ENST00000542830 FAUP35544 74 aaKnown RBP13.03□□□□□ -0.32
LTBR-210ENST00000542830 Q6ZRM9 215 aa13.03□□□□□ -0.32
LTBR-210ENST00000542830 LHFPL5Q8TAF8 219 aa13.03□□□□□ -0.32
LTBR-210ENST00000542830 IL22RA2Q969J5 263 aa13.03□□□□□ -0.32
LTBR-210ENST00000542830 GALNT14Q96FL9 552 aa13.03□□□□□ -0.32
LTBR-210ENST00000542830 RETNQ9HD89 108 aa13.03□□□□□ -0.32
LTBR-210ENST00000542830 TMEM56-RWDD3S4R434 201 aa13.03□□□□□ -0.32
LTBR-210ENST00000542830 CCDC160A6NGH7 325 aa13.02□□□□□ -0.33
LTBR-210ENST00000542830 CHEK1O14757 476 aa13.02□□□□□ -0.33
LTBR-210ENST00000542830 TMEM268Q5VZI3 342 aa13.02□□□□□ -0.33
LTBR-210ENST00000542830 ZNF600Q6ZNG1 722 aa13.02□□□□□ -0.33
LTBR-210ENST00000542830 ZNF414Q96IQ9 312 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms