RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 EFNA4P52798 201 aa11.34□□□□□ -0.59
LDB3-207ENST00000542786 RHOBP62745 196 aa11.34□□□□□ -0.59
LDB3-207ENST00000542786 KLRD1Q13241 179 aa11.34□□□□□ -0.59
LDB3-207ENST00000542786 OR2T6Q8NHC8 308 aa11.34□□□□□ -0.59
LDB3-207ENST00000542786 MRPL36Q9P0J6 103 aaKnown RBP11.34□□□□□ -0.59
LDB3-207ENST00000542786 NAT8Q9UHE5 227 aa11.34□□□□□ -0.59
LDB3-207ENST00000542786 ARHGAP32A7KAX9 2087 aa11.34□□□□□ -0.59
LDB3-207ENST00000542786 IGKV1D-37A0A075B6S9 117 aa11.34□□□□□ -0.59
LDB3-207ENST00000542786 TIMM23O14925 209 aa11.34□□□□□ -0.59
LDB3-207ENST00000542786 IGHV2-5P01817 119 aa11.34□□□□□ -0.59
LDB3-207ENST00000542786 GCHFRP30047 84 aa11.34□□□□□ -0.59
LDB3-207ENST00000542786 RPL27AP46776 148 aaKnown RBP11.34□□□□□ -0.59
LDB3-207ENST00000542786 RND2P52198 227 aa11.34□□□□□ -0.59
LDB3-207ENST00000542786 IQCF2Q8IXL9 164 aa11.34□□□□□ -0.59
LDB3-207ENST00000542786 THAP8Q8NA92 274 aa11.34□□□□□ -0.59
LDB3-207ENST00000542786 DPM3Q9P2X0 92 aa11.34□□□□□ -0.59
LDB3-207ENST00000542786 OR5G3P0C626 314 aa11.33□□□□□ -0.6
LDB3-207ENST00000542786 AREGP15514 252 aa11.33□□□□□ -0.6
LDB3-207ENST00000542786 CTRB1P17538 263 aa11.33□□□□□ -0.6
LDB3-207ENST00000542786 HTR1DP28221 377 aa11.33□□□□□ -0.6
LDB3-207ENST00000542786 GNB1P62873 340 aa11.33□□□□□ -0.6
LDB3-207ENST00000542786 ELOBQ15370 118 aa11.33□□□□□ -0.6
LDB3-207ENST00000542786 FBLN7Q53RD9 439 aa11.33□□□□□ -0.6
LDB3-207ENST00000542786 CTRB2Q6GPI1 263 aa11.33□□□□□ -0.6
LDB3-207ENST00000542786 MIR17HGQ75NE6 70 aa11.33□□□□□ -0.6
LDB3-207ENST00000542786 RPUSD4Q96CM3 377 aaKnown RBP11.33□□□□□ -0.6
LDB3-207ENST00000542786 TMEM242Q9NWH2 141 aa11.33□□□□□ -0.6
LDB3-207ENST00000542786 METTL1Q9UBP6 276 aaKnown RBP11.33□□□□□ -0.6
LDB3-207ENST00000542786 YTHDF2Q9Y5A9 579 aaKnown RBP11.33□□□□□ -0.6
LDB3-207ENST00000542786 KLF2Q9Y5W3 355 aaPredicted RBP11.33□□□□□ -0.6
LDB3-207ENST00000542786 PLXNB1O43157 2135 aa11.32□□□□□ -0.6
LDB3-207ENST00000542786 FOXH1O75593 365 aa11.32□□□□□ -0.6
LDB3-207ENST00000542786 REG1AP05451 166 aa11.32□□□□□ -0.6
LDB3-207ENST00000542786 GATA2P23769 480 aaPredicted RBP11.32□□□□□ -0.6
LDB3-207ENST00000542786 RPL23P62829 140 aaKnown RBP11.32□□□□□ -0.6
LDB3-207ENST00000542786 TMEM241Q24JQ0 296 aa11.32□□□□□ -0.6
LDB3-207ENST00000542786 ZNF343Q6P1L6 599 aa11.32□□□□□ -0.6
LDB3-207ENST00000542786 PPP1R27Q86WC6 154 aa11.32□□□□□ -0.6
LDB3-207ENST00000542786 OR51G1Q8NGK1 321 aa11.32□□□□□ -0.6
LDB3-207ENST00000542786 Q8WTZ3 238 aa11.32□□□□□ -0.6
LDB3-207ENST00000542786 ZNF503Q96F45 646 aa11.32□□□□□ -0.6
LDB3-207ENST00000542786 SSX3Q99909 188 aa11.32□□□□□ -0.6
LDB3-207ENST00000542786 FUT9Q9Y231 359 aa11.32□□□□□ -0.6
LDB3-207ENST00000542786 DMRT1Q9Y5R6 373 aa11.32□□□□□ -0.6
LDB3-207ENST00000542786 PDE6DO43924 150 aa11.32□□□□□ -0.6
LDB3-207ENST00000542786 SUB1P53999 127 aaKnown RBP eCLIP11.32□□□□□ -0.6
LDB3-207ENST00000542786 UBE2G2P60604 165 aa11.32□□□□□ -0.6
LDB3-207ENST00000542786 TNXAQ16473 311 aa11.32□□□□□ -0.6
LDB3-207ENST00000542786 RUSC1-AS1Q66K80 236 aa11.32□□□□□ -0.6
LDB3-207ENST00000542786 C19orf35Q6ZS72 473 aa11.32□□□□□ -0.6
LDB3-207ENST00000542786 LHFPL4Q7Z7J7 247 aa11.32□□□□□ -0.6
LDB3-207ENST00000542786 ACY3Q96HD9 319 aa11.32□□□□□ -0.6
LDB3-207ENST00000542786 SIRPDQ9H106 197 aa11.32□□□□□ -0.6
LDB3-207ENST00000542786 FBXL15Q9H469 300 aa11.32□□□□□ -0.6
LDB3-207ENST00000542786 IGSF10Q6WRI0 2623 aa11.31□□□□□ -0.6
LDB3-207ENST00000542786 F6UZH7 168 aa11.31□□□□□ -0.6
LDB3-207ENST00000542786 FCN1O00602 326 aa11.31□□□□□ -0.6
LDB3-207ENST00000542786 CXCL1P09341 107 aa11.31□□□□□ -0.6
LDB3-207ENST00000542786 ZNF674Q2M3X9 581 aa11.31□□□□□ -0.6
LDB3-207ENST00000542786 TXNDC17Q9BRA2 123 aa11.31□□□□□ -0.6
LDB3-207ENST00000542786 C19orf24Q9BVV8 132 aa11.31□□□□□ -0.6
LDB3-207ENST00000542786 HOXB4P17483 251 aaPredicted RBP11.3□□□□□ -0.6
LDB3-207ENST00000542786 LMO4P61968 165 aa11.3□□□□□ -0.6
LDB3-207ENST00000542786 FAM78BQ5VT40 261 aa11.3□□□□□ -0.6
LDB3-207ENST00000542786 C1QL4Q86Z23 238 aa11.3□□□□□ -0.6
LDB3-207ENST00000542786 ZFP82Q8N141 532 aa11.3□□□□□ -0.6
LDB3-207ENST00000542786 NPBQ8NG41 125 aa11.3□□□□□ -0.6
LDB3-207ENST00000542786 TMEM37Q8WXS4 190 aa11.3□□□□□ -0.6
LDB3-207ENST00000542786 NPIPB3Q92617 1050 aa11.3□□□□□ -0.6
LDB3-207ENST00000542786 DOK5Q9P104 306 aa11.3□□□□□ -0.6
LDB3-207ENST00000542786 ARL2-SNX15V9GYD0 113 aa11.3□□□□□ -0.6
LDB3-207ENST00000542786 CLN5O75503 358 aa11.29□□□□□ -0.6
LDB3-207ENST00000542786 NDUFA3O95167 84 aa11.29□□□□□ -0.6
LDB3-207ENST00000542786 CST9LP1Q5W188 147 aa11.29□□□□□ -0.6
LDB3-207ENST00000542786 VMO1Q7Z5L0 202 aa11.29□□□□□ -0.6
LDB3-207ENST00000542786 MRPL41Q8IXM3 137 aaKnown RBP11.29□□□□□ -0.6
LDB3-207ENST00000542786 DYNAPQ8N1N2 210 aa11.29□□□□□ -0.6
LDB3-207ENST00000542786 OR1P1Q8NH06 330 aa11.29□□□□□ -0.6
LDB3-207ENST00000542786 C11orf52Q96A22 123 aa11.29□□□□□ -0.6
LDB3-207ENST00000542786 FAM167A-AS1Q96KT0 104 aa11.29□□□□□ -0.6
LDB3-207ENST00000542786 DERL1Q9BUN8 251 aa11.29□□□□□ -0.6
LDB3-207ENST00000542786 CTDSP1Q9GZU7 261 aa11.29□□□□□ -0.6
LDB3-207ENST00000542786 TCRBV4S1A1TA0A5B7 111 aa11.29□□□□□ -0.6
LDB3-207ENST00000542786 C1orf196B1AJZ1 125 aa11.29□□□□□ -0.6
LDB3-207ENST00000542786 ACTL6BO94805 426 aa11.29□□□□□ -0.6
LDB3-207ENST00000542786 CEACAM3P40198 252 aa11.29□□□□□ -0.6
LDB3-207ENST00000542786 ADIRFQ15847 76 aa11.29□□□□□ -0.6
LDB3-207ENST00000542786 MORN5Q5VZ52 161 aa11.29□□□□□ -0.6
LDB3-207ENST00000542786 Q8N6K4 173 aa11.29□□□□□ -0.6
LDB3-207ENST00000542786 NANPQ8TBE9 248 aa11.29□□□□□ -0.6
LDB3-207ENST00000542786 SRSF12Q8WXF0 261 aaKnown RBP11.29□□□□□ -0.6
LDB3-207ENST00000542786 AJUBAQ96IF1 538 aa11.29□□□□□ -0.6
LDB3-207ENST00000542786 SRSF8Q9BRL6 282 aaKnown RBP11.29□□□□□ -0.6
LDB3-207ENST00000542786 TECRQ9NZ01 308 aaKnown RBP11.29□□□□□ -0.6
LDB3-207ENST00000542786 HILPDAQ9Y5L2 63 aa11.29□□□□□ -0.6
LDB3-207ENST00000542786 F11RQ9Y624 299 aaKnown RBP11.29□□□□□ -0.6
LDB3-207ENST00000542786 ACACBO00763 2458 aa11.28□□□□□ -0.6
LDB3-207ENST00000542786 TGIF2-C20orf24A0A0A6YYL0 155 aa11.28□□□□□ -0.6
LDB3-207ENST00000542786 IGHV2-70DA0A0C4DH43 119 aa11.28□□□□□ -0.6
LDB3-207ENST00000542786 CLDN34H7C241 214 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms