RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 Q6ZSR3 168 aa6.82□□□□□ -1.32
PRKAB1-207ENST00000542698 FAM19A2Q8N3H0 131 aa6.82□□□□□ -1.32
PRKAB1-207ENST00000542698 COQ2Q96H96 371 aa6.82□□□□□ -1.32
PRKAB1-207ENST00000542698 PGLYRP4Q96LB8 373 aa6.82□□□□□ -1.32
PRKAB1-207ENST00000542698 MIEN1Q9BRT3 115 aa6.82□□□□□ -1.32
PRKAB1-207ENST00000542698 YLPM1P49750 1951 aaKnown RBP6.81□□□□□ -1.32
PRKAB1-207ENST00000542698 SRRM5B3KS81 715 aa6.81□□□□□ -1.32
PRKAB1-207ENST00000542698 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.81□□□□□ -1.32
PRKAB1-207ENST00000542698 BMPR1BO00238 502 aa6.81□□□□□ -1.32
PRKAB1-207ENST00000542698 LGALS7P47929 136 aa6.81□□□□□ -1.32
PRKAB1-207ENST00000542698 ZNF726P1Q15940 193 aa6.81□□□□□ -1.32
PRKAB1-207ENST00000542698 KRTCAP3Q53RY4 240 aa6.81□□□□□ -1.32
PRKAB1-207ENST00000542698 LINC00305Q7Z4B0 112 aa6.81□□□□□ -1.32
PRKAB1-207ENST00000542698 RAB1CQ92928 201 aa6.81□□□□□ -1.32
PRKAB1-207ENST00000542698 SCNM1Q9BWG6 230 aa6.81□□□□□ -1.32
PRKAB1-207ENST00000542698 SEPSECSQ9HD40 501 aaKnown RBP6.81□□□□□ -1.32
PRKAB1-207ENST00000542698 NRN1Q9NPD7 142 aa6.81□□□□□ -1.32
PRKAB1-207ENST00000542698 H3BTX0 84 aa6.81□□□□□ -1.32
PRKAB1-207ENST00000542698 DKK1O94907 266 aa6.81□□□□□ -1.32
PRKAB1-207ENST00000542698 FOXA3P55318 350 aaPredicted RBP6.81□□□□□ -1.32
PRKAB1-207ENST00000542698 FAM27E3Q08E93 113 aa6.81□□□□□ -1.32
PRKAB1-207ENST00000542698 TBR1Q16650 682 aa6.81□□□□□ -1.32
PRKAB1-207ENST00000542698 BEND2Q8NDZ0 799 aa6.81□□□□□ -1.32
PRKAB1-207ENST00000542698 OR9G1Q8NH87 305 aa6.81□□□□□ -1.32
PRKAB1-207ENST00000542698 OSTCQ9NRP0 149 aa6.81□□□□□ -1.32
PRKAB1-207ENST00000542698 METRNQ9UJH8 293 aa6.81□□□□□ -1.32
PRKAB1-207ENST00000542698 ARHGAP21Q5T5U3 1957 aa6.81□□□□□ -1.32
PRKAB1-207ENST00000542698 TMSB15BA0A087X1C1 80 aa6.81□□□□□ -1.32
PRKAB1-207ENST00000542698 UPK2O00526 184 aa6.81□□□□□ -1.32
PRKAB1-207ENST00000542698 DNLZQ5SXM8 178 aa6.81□□□□□ -1.32
PRKAB1-207ENST00000542698 SSX8Q7RTT4 187 aa6.81□□□□□ -1.32
PRKAB1-207ENST00000542698 BPIFA4PQ86YQ2 179 aa6.81□□□□□ -1.32
PRKAB1-207ENST00000542698 CRIM1Q9NZV1 1036 aa6.81□□□□□ -1.32
PRKAB1-207ENST00000542698 CACNA1AO00555 2505 aa6.81□□□□□ -1.32
PRKAB1-207ENST00000542698 A0A1W2PRE2 83 aa6.8□□□□□ -1.32
PRKAB1-207ENST00000542698 IFITM10A6NMD0 228 aa6.8□□□□□ -1.32
PRKAB1-207ENST00000542698 PEAR1Q5VY43 1037 aaPredicted RBP6.8□□□□□ -1.32
PRKAB1-207ENST00000542698 CYB5R2Q6BCY4 276 aa6.8□□□□□ -1.32
PRKAB1-207ENST00000542698 ELOVL5Q9NYP7 299 aa6.8□□□□□ -1.32
PRKAB1-207ENST00000542698 PRSS1P07477 247 aa6.8□□□□□ -1.32
PRKAB1-207ENST00000542698 RELBQ01201 579 aa6.8□□□□□ -1.32
PRKAB1-207ENST00000542698 ACTL10Q5JWF8 245 aa6.8□□□□□ -1.32
PRKAB1-207ENST00000542698 NOTCH3Q9UM47 2321 aa6.8□□□□□ -1.32
PRKAB1-207ENST00000542698 MED13Q9UHV7 2174 aa6.8□□□□□ -1.32
PRKAB1-207ENST00000542698 TRAV3A0A0B4J244 114 aa6.8□□□□□ -1.32
PRKAB1-207ENST00000542698 ZNF503-AS2A6NEH8 195 aa6.8□□□□□ -1.32
PRKAB1-207ENST00000542698 PEX7O00628 323 aa6.8□□□□□ -1.32
PRKAB1-207ENST00000542698 MLNRO43193 412 aa6.8□□□□□ -1.32
PRKAB1-207ENST00000542698 GFRA3O60609 400 aa6.8□□□□□ -1.32
PRKAB1-207ENST00000542698 IGKV1D-33P01593 117 aa6.8□□□□□ -1.32
PRKAB1-207ENST00000542698 IGKV1-33P01594 117 aa6.8□□□□□ -1.32
PRKAB1-207ENST00000542698 KIR2DL2P43627 348 aaPredicted RBP6.8□□□□□ -1.32
PRKAB1-207ENST00000542698 CD177Q8N6Q3 437 aa6.8□□□□□ -1.32
PRKAB1-207ENST00000542698 OR8A1Q8NGG7 326 aa6.8□□□□□ -1.32
PRKAB1-207ENST00000542698 OR8B2Q96RD0 313 aa6.8□□□□□ -1.32
PRKAB1-207ENST00000542698 MGST2Q99735 147 aa6.8□□□□□ -1.32
PRKAB1-207ENST00000542698 GNB1LQ9BYB4 327 aa6.8□□□□□ -1.32
PRKAB1-207ENST00000542698 IGHV1-18A0A0C4DH31 117 aa6.79□□□□□ -1.32
PRKAB1-207ENST00000542698 FAM90A27PA6NNH2 459 aa6.79□□□□□ -1.32
PRKAB1-207ENST00000542698 MOSP00540 346 aa6.79□□□□□ -1.32
PRKAB1-207ENST00000542698 SAA1P0DJI8 122 aaPredicted RBP6.79□□□□□ -1.32
PRKAB1-207ENST00000542698 CD33P20138 364 aa6.79□□□□□ -1.32
PRKAB1-207ENST00000542698 COMPP49747 757 aaPredicted RBP6.79□□□□□ -1.32
PRKAB1-207ENST00000542698 CD69Q07108 199 aa6.79□□□□□ -1.32
PRKAB1-207ENST00000542698 C1orf194Q5T5A4 169 aa6.79□□□□□ -1.32
PRKAB1-207ENST00000542698 OR8B3Q8NGG8 313 aa6.79□□□□□ -1.32
PRKAB1-207ENST00000542698 GUCD1Q96NT3 240 aa6.79□□□□□ -1.32
PRKAB1-207ENST00000542698 ORM1P02763 201 aa6.79□□□□□ -1.32
PRKAB1-207ENST00000542698 SELLP14151 372 aa6.79□□□□□ -1.32
PRKAB1-207ENST00000542698 BTF3P20290 206 aaKnown RBP6.79□□□□□ -1.32
PRKAB1-207ENST00000542698 CD40P25942 277 aa6.79□□□□□ -1.32
PRKAB1-207ENST00000542698 S100A4P26447 101 aaKnown RBP6.79□□□□□ -1.32
PRKAB1-207ENST00000542698 HBBP68871 147 aa6.79□□□□□ -1.32
PRKAB1-207ENST00000542698 PRCDQ00LT1 54 aa6.79□□□□□ -1.32
PRKAB1-207ENST00000542698 ZNF124Q15973 351 aa6.79□□□□□ -1.32
PRKAB1-207ENST00000542698 HAPLN4Q86UW8 402 aa6.79□□□□□ -1.32
PRKAB1-207ENST00000542698 DTX1Q86Y01 620 aa6.79□□□□□ -1.32
PRKAB1-207ENST00000542698 MDS2Q8NDY4 140 aa6.79□□□□□ -1.32
PRKAB1-207ENST00000542698 GRAMD2BQ96HH9 432 aa6.79□□□□□ -1.32
PRKAB1-207ENST00000542698 RAB1BQ9H0U4 201 aa6.79□□□□□ -1.32
PRKAB1-207ENST00000542698 CHODLQ9H9P2 273 aa6.79□□□□□ -1.32
PRKAB1-207ENST00000542698 CDC42EP3Q9UKI2 254 aa6.79□□□□□ -1.32
PRKAB1-207ENST00000542698 IZUMO1RA6ND01 250 aa6.79□□□□□ -1.32
PRKAB1-207ENST00000542698 LMO1P25800 156 aa6.79□□□□□ -1.32
PRKAB1-207ENST00000542698 SPATA31B1PQ5VZV4 182 aa6.79□□□□□ -1.32
PRKAB1-207ENST00000542698 C12orf54Q6X4T0 127 aa6.79□□□□□ -1.32
PRKAB1-207ENST00000542698 SRSF12Q8WXF0 261 aaKnown RBP6.79□□□□□ -1.32
PRKAB1-207ENST00000542698 SNRNP40Q96DI7 357 aaKnown RBP6.79□□□□□ -1.32
PRKAB1-207ENST00000542698 MRPL20Q9BYC9 149 aaKnown RBP6.79□□□□□ -1.32
PRKAB1-207ENST00000542698 LINC00312Q9Y6C7 94 aa6.79□□□□□ -1.32
PRKAB1-207ENST00000542698 MALRD1Q5VYJ5 2156 aa6.79□□□□□ -1.32
PRKAB1-207ENST00000542698 HIGD1CA8MV81 97 aa6.79□□□□□ -1.32
PRKAB1-207ENST00000542698 A8MWP6 167 aa6.79□□□□□ -1.32
PRKAB1-207ENST00000542698 SLC25A34Q6PIV7 304 aa6.79□□□□□ -1.32
PRKAB1-207ENST00000542698 RNASEH2CQ8TDP1 164 aaKnown RBP6.79□□□□□ -1.32
PRKAB1-207ENST00000542698 GPR82Q96P67 336 aa6.79□□□□□ -1.32
PRKAB1-207ENST00000542698 TMEM70Q9BUB7 260 aa6.79□□□□□ -1.32
PRKAB1-207ENST00000542698 LOC389332A0A1B0GUA5 103 aa6.78□□□□□ -1.32
PRKAB1-207ENST00000542698 ZNF324O75467 553 aaPredicted RBP6.78□□□□□ -1.32
PRKAB1-207ENST00000542698 AREGP15514 252 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms