RNA–Protein interactions for RNA: ENST00000542570.5

TOP3A-208, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-208ENST00000542570 NMSQ5H8A3 153 aa8.31□□□□□ -1.08
TOP3A-208ENST00000542570 HIST2H2BCQ6DN03 193 aa8.31□□□□□ -1.08
TOP3A-208ENST00000542570 MRPL54Q6P161 138 aaKnown RBP8.31□□□□□ -1.08
TOP3A-208ENST00000542570 VMO1Q7Z5L0 202 aa8.31□□□□□ -1.08
TOP3A-208ENST00000542570 OR4D5Q8NGN0 318 aa8.31□□□□□ -1.08
TOP3A-208ENST00000542570 SLC25A33Q9BSK2 321 aa8.31□□□□□ -1.08
TOP3A-208ENST00000542570 NPCDR1Q9BY65 106 aa8.31□□□□□ -1.08
TOP3A-208ENST00000542570 IFI27L2Q9H2X8 130 aa8.31□□□□□ -1.08
TOP3A-208ENST00000542570 PGPEP1LA6NFU8 196 aa8.31□□□□□ -1.08
TOP3A-208ENST00000542570 RNF223E7ERA6 249 aa8.31□□□□□ -1.08
TOP3A-208ENST00000542570 CRYBB3P26998 211 aa8.31□□□□□ -1.08
TOP3A-208ENST00000542570 ZNF329Q86UD4 541 aa8.31□□□□□ -1.08
TOP3A-208ENST00000542570 OR2T10Q8NGZ9 312 aa8.31□□□□□ -1.08
TOP3A-208ENST00000542570 OR4A5Q8NH83 315 aa8.31□□□□□ -1.08
TOP3A-208ENST00000542570 OSR1Q8TAX0 266 aaPredicted RBP8.31□□□□□ -1.08
TOP3A-208ENST00000542570 POM121Q96HA1 1249 aa8.31□□□□□ -1.08
TOP3A-208ENST00000542570 PAXXQ9BUH6 204 aa8.31□□□□□ -1.08
TOP3A-208ENST00000542570 AAMDCQ9H7C9 122 aa8.31□□□□□ -1.08
TOP3A-208ENST00000542570 ZNF331Q9NQX6 463 aaPredicted RBP8.31□□□□□ -1.08
TOP3A-208ENST00000542570 MBNL3Q9NUK0 354 aaKnown RBP8.31□□□□□ -1.08
TOP3A-208ENST00000542570 CTSZQ9UBR2 303 aa8.31□□□□□ -1.08
TOP3A-208ENST00000542570 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.3□□□□□ -1.08
TOP3A-208ENST00000542570 IGKV1-39P01597 117 aa8.3□□□□□ -1.08
TOP3A-208ENST00000542570 IGKV1D-39P04432 117 aa8.3□□□□□ -1.08
TOP3A-208ENST00000542570 BCL2P10415 239 aa8.3□□□□□ -1.08
TOP3A-208ENST00000542570 GPR183P32249 361 aa8.3□□□□□ -1.08
TOP3A-208ENST00000542570 IGF2-ASQ6U949 168 aa8.3□□□□□ -1.08
TOP3A-208ENST00000542570 AMY1AP04745 511 aa8.3□□□□□ -1.08
TOP3A-208ENST00000542570 SERF2P84101 59 aa8.3□□□□□ -1.08
TOP3A-208ENST00000542570 PAX5Q02548 391 aa8.3□□□□□ -1.08
TOP3A-208ENST00000542570 GBGT1Q8N5D6 347 aa8.3□□□□□ -1.08
TOP3A-208ENST00000542570 MUC21A0A0G2JKD1 596 aa8.3□□□□□ -1.08
TOP3A-208ENST00000542570 MUC21A0A140T8X8 626 aa8.3□□□□□ -1.08
TOP3A-208ENST00000542570 A0A1W2PRX2 142 aa8.3□□□□□ -1.08
TOP3A-208ENST00000542570 UPK2O00526 184 aa8.3□□□□□ -1.08
TOP3A-208ENST00000542570 MUC21Q5SSG8 566 aa8.3□□□□□ -1.08
TOP3A-208ENST00000542570 HELTA6NFD8 242 aa8.29□□□□□ -1.08
TOP3A-208ENST00000542570 OR2T8A6NH00 312 aa8.29□□□□□ -1.08
TOP3A-208ENST00000542570 DNASE2O00115 360 aaPredicted RBP8.29□□□□□ -1.08
TOP3A-208ENST00000542570 IL6RP08887 468 aaPredicted RBP8.29□□□□□ -1.08
TOP3A-208ENST00000542570 AREGP15514 252 aa8.29□□□□□ -1.08
TOP3A-208ENST00000542570 CD81P60033 236 aa8.29□□□□□ -1.08
TOP3A-208ENST00000542570 MEF2BQ02080 365 aaPredicted RBP8.29□□□□□ -1.08
TOP3A-208ENST00000542570 ZNF343Q6P1L6 599 aa8.29□□□□□ -1.08
TOP3A-208ENST00000542570 MIR17HGQ75NE6 70 aa8.29□□□□□ -1.08
TOP3A-208ENST00000542570 SRD5A3Q9H8P0 318 aa8.29□□□□□ -1.08
TOP3A-208ENST00000542570 LOXP28300 417 aaPredicted RBP8.29□□□□□ -1.08
TOP3A-208ENST00000542570 GALR1P47211 349 aa8.29□□□□□ -1.08
TOP3A-208ENST00000542570 SNRPEP62304 92 aaKnown RBP8.29□□□□□ -1.08
TOP3A-208ENST00000542570 TCTEX1D1Q8N7M0 179 aa8.29□□□□□ -1.08
TOP3A-208ENST00000542570 TPSG1Q9NRR2 321 aa8.29□□□□□ -1.08
TOP3A-208ENST00000542570 NACAE9PAV3 2078 aa8.29□□□□□ -1.08
TOP3A-208ENST00000542570 TRAV5A0A0B4J249 113 aa8.29□□□□□ -1.08
TOP3A-208ENST00000542570 TEX50A0A1B0GTY4 177 aa8.29□□□□□ -1.08
TOP3A-208ENST00000542570 MFSD2BA6NFX1 497 aa8.29□□□□□ -1.08
TOP3A-208ENST00000542570 FAM90A26D6RGX4 464 aa8.29□□□□□ -1.08
TOP3A-208ENST00000542570 PLA2G5P39877 138 aa8.29□□□□□ -1.08
TOP3A-208ENST00000542570 C17orf58Q2M2W7 97 aa8.29□□□□□ -1.08
TOP3A-208ENST00000542570 UQCC3Q6UW78 93 aa8.29□□□□□ -1.08
TOP3A-208ENST00000542570 PRNTQ86SH4 94 aa8.29□□□□□ -1.08
TOP3A-208ENST00000542570 SSC4DQ8WTU2 575 aa8.29□□□□□ -1.08
TOP3A-208ENST00000542570 DNAJC4Q9NNZ3 241 aa8.29□□□□□ -1.08
TOP3A-208ENST00000542570 NUP210LQ5VU65 1888 aa8.29□□□□□ -1.08
TOP3A-208ENST00000542570 ATMQ13315 3056 aa8.28□□□□□ -1.08
TOP3A-208ENST00000542570 CLDN34H7C241 214 aa8.28□□□□□ -1.08
TOP3A-208ENST00000542570 ATP5G3P48201 142 aa8.28□□□□□ -1.08
TOP3A-208ENST00000542570 DHRS7BQ6IAN0 325 aaPredicted RBP8.28□□□□□ -1.08
TOP3A-208ENST00000542570 CLEC19AQ6UXS0 136 aa8.28□□□□□ -1.08
TOP3A-208ENST00000542570 DNM1P46Q6ZS02 220 aa8.28□□□□□ -1.08
TOP3A-208ENST00000542570 CYTL1Q9NRR1 136 aa8.28□□□□□ -1.08
TOP3A-208ENST00000542570 IGHV1-3A0A0C4DH29 117 aa8.28□□□□□ -1.08
TOP3A-208ENST00000542570 NPIPB11E5RHQ5 1161 aa8.28□□□□□ -1.08
TOP3A-208ENST00000542570 G3V3Q6 166 aa8.28□□□□□ -1.08
TOP3A-208ENST00000542570 CSN3P07498 182 aa8.28□□□□□ -1.08
TOP3A-208ENST00000542570 ARL3P36405 182 aa8.28□□□□□ -1.08
TOP3A-208ENST00000542570 TPPP2P59282 170 aa8.28□□□□□ -1.08
TOP3A-208ENST00000542570 PFDN5Q99471 154 aa8.28□□□□□ -1.08
TOP3A-208ENST00000542570 FBXL7Q9UJT9 491 aa8.28□□□□□ -1.08
TOP3A-208ENST00000542570 C22orf46C9J442 243 aa8.28□□□□□ -1.08
TOP3A-208ENST00000542570 FCN1O00602 326 aa8.28□□□□□ -1.08
TOP3A-208ENST00000542570 PPP1R2P9O14990 202 aa8.28□□□□□ -1.08
TOP3A-208ENST00000542570 TRGV3P03979 118 aa8.28□□□□□ -1.08
TOP3A-208ENST00000542570 PYYP10082 97 aa8.28□□□□□ -1.08
TOP3A-208ENST00000542570 LRRC75BQ2VPJ9 315 aa8.28□□□□□ -1.08
TOP3A-208ENST00000542570 LINC00305Q7Z4B0 112 aa8.28□□□□□ -1.08
TOP3A-208ENST00000542570 HIGD1AQ9Y241 93 aa8.28□□□□□ -1.08
TOP3A-208ENST00000542570 ADGRG4Q8IZF6 3080 aa8.28□□□□□ -1.08
TOP3A-208ENST00000542570 C15orf61A6NNL5 157 aa8.27□□□□□ -1.08
TOP3A-208ENST00000542570 C19orf84I3L1E1 186 aa8.27□□□□□ -1.08
TOP3A-208ENST00000542570 CXorf1O96002 111 aa8.27□□□□□ -1.08
TOP3A-208ENST00000542570 SRD5A1P18405 259 aa8.27□□□□□ -1.08
TOP3A-208ENST00000542570 LMO1P25800 156 aa8.27□□□□□ -1.08
TOP3A-208ENST00000542570 S100A4P26447 101 aaKnown RBP8.27□□□□□ -1.08
TOP3A-208ENST00000542570 IL17RELQ6ZVW7 336 aa8.27□□□□□ -1.08
TOP3A-208ENST00000542570 FAM169BQ8N8A8 192 aa8.27□□□□□ -1.08
TOP3A-208ENST00000542570 KDF1Q8NAX2 398 aaPredicted RBP8.27□□□□□ -1.08
TOP3A-208ENST00000542570 A6NNC1 897 aa8.27□□□□□ -1.09
TOP3A-208ENST00000542570 SCGB1D1O95968 90 aa8.27□□□□□ -1.09
TOP3A-208ENST00000542570 HLA-DRB5Q30154 266 aa8.27□□□□□ -1.09
TOP3A-208ENST00000542570 SPATA31B1PQ5VZV4 182 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms