RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 MFAP2P55001 183 aa18■□□□□ 0.47
HOMER3-205ENST00000542541 PRSS54Q6PEW0 395 aa18■□□□□ 0.47
HOMER3-205ENST00000542541 OR2T35Q8NGX2 323 aa18■□□□□ 0.47
HOMER3-205ENST00000542541 RNASEH2CQ8TDP1 164 aaKnown RBP18■□□□□ 0.47
HOMER3-205ENST00000542541 MISP3Q96FF7 219 aa18■□□□□ 0.47
HOMER3-205ENST00000542541 PAIP2BQ9ULR5 123 aaKnown RBP18■□□□□ 0.47
HOMER3-205ENST00000542541 DMRT1Q9Y5R6 373 aa18■□□□□ 0.47
HOMER3-205ENST00000542541 TCRBV4S1A1TA0A5B7 111 aa17.99■□□□□ 0.47
HOMER3-205ENST00000542541 H3BP45 60 aa17.99■□□□□ 0.47
HOMER3-205ENST00000542541 IFNA4P05014 189 aa17.99■□□□□ 0.47
HOMER3-205ENST00000542541 OR8U8P0C7N1 319 aa17.99■□□□□ 0.47
HOMER3-205ENST00000542541 CD28P10747 220 aa17.99■□□□□ 0.47
HOMER3-205ENST00000542541 CAV2P51636 162 aa17.99■□□□□ 0.47
HOMER3-205ENST00000542541 ATP5G2Q06055 141 aa17.99■□□□□ 0.47
HOMER3-205ENST00000542541 EXOSC2Q13868 293 aaKnown RBP17.99■□□□□ 0.47
HOMER3-205ENST00000542541 TCTEX1D4Q5JR98 221 aa17.99■□□□□ 0.47
HOMER3-205ENST00000542541 C12orf54Q6X4T0 127 aa17.99■□□□□ 0.47
HOMER3-205ENST00000542541 C11orf1Q9H5F2 150 aa17.99■□□□□ 0.47
HOMER3-205ENST00000542541 C15orf62A8K5M9 175 aa17.98■□□□□ 0.47
HOMER3-205ENST00000542541 C15orf32Q32M92 178 aa17.98■□□□□ 0.47
HOMER3-205ENST00000542541 LCNL1Q6ZST4 164 aa17.98■□□□□ 0.47
HOMER3-205ENST00000542541 MYOZ3Q8TDC0 251 aa17.98■□□□□ 0.47
HOMER3-205ENST00000542541 CXorf58Q96LI9 332 aa17.98■□□□□ 0.47
HOMER3-205ENST00000542541 UBE2E2Q96LR5 201 aa17.98■□□□□ 0.47
HOMER3-205ENST00000542541 H0YIZ8 118 aa17.98■□□□□ 0.47
HOMER3-205ENST00000542541 CCNKO75909 580 aa17.98■□□□□ 0.47
HOMER3-205ENST00000542541 ZNF491Q8N8L2 437 aa17.98■□□□□ 0.47
HOMER3-205ENST00000542541 C11orf44Q8N8P7 122 aa17.98■□□□□ 0.47
HOMER3-205ENST00000542541 TMEM170AQ8WVE7 144 aa17.98■□□□□ 0.47
HOMER3-205ENST00000542541 OR4C12Q96R67 309 aa17.98■□□□□ 0.47
HOMER3-205ENST00000542541 RNF126Q9BV68 326 aa17.98■□□□□ 0.47
HOMER3-205ENST00000542541 LYRM2Q9NU23 88 aaPredicted RBP17.98■□□□□ 0.47
HOMER3-205ENST00000542541 OR5AC2Q9NZP5 309 aa17.98■□□□□ 0.47
HOMER3-205ENST00000542541 NDUFB8O95169 186 aa17.97■□□□□ 0.47
HOMER3-205ENST00000542541 P2RY1P47900 373 aa17.97■□□□□ 0.47
HOMER3-205ENST00000542541 CDX1P47902 265 aaPredicted RBP17.97■□□□□ 0.47
HOMER3-205ENST00000542541 KHDC1LQ5JSQ8 128 aa17.97■□□□□ 0.47
HOMER3-205ENST00000542541 ETV3LQ6ZN32 361 aa17.97■□□□□ 0.47
HOMER3-205ENST00000542541 C3orf56Q8N813 242 aa17.97■□□□□ 0.47
HOMER3-205ENST00000542541 VN1R17PQ8TDU5 208 aa17.97■□□□□ 0.47
HOMER3-205ENST00000542541 PINX1Q96BK5 328 aaKnown RBP17.97■□□□□ 0.47
HOMER3-205ENST00000542541 TSSC4Q9Y5U2 329 aaPredicted RBP17.97■□□□□ 0.47
HOMER3-205ENST00000542541 COL6A5A8TX70 2615 aa17.97■□□□□ 0.47
HOMER3-205ENST00000542541 RPS10-NUDT3A0A1W2PQS6 291 aa17.96■□□□□ 0.47
HOMER3-205ENST00000542541 SCAF4O95104 1147 aaKnown RBP17.96■□□□□ 0.47
HOMER3-205ENST00000542541 OPRK1P41145 380 aa17.96■□□□□ 0.47
HOMER3-205ENST00000542541 KIAA0141Q14154 515 aaPredicted RBP17.96■□□□□ 0.47
HOMER3-205ENST00000542541 ETFRF1Q6IPR1 90 aa17.96■□□□□ 0.47
HOMER3-205ENST00000542541 TMEM14EPQ6UXP3 125 aa17.96■□□□□ 0.47
HOMER3-205ENST00000542541 CITED2Q99967 270 aaPredicted RBP17.96■□□□□ 0.47
HOMER3-205ENST00000542541 RANGRFQ9HD47 186 aaPredicted RBP17.96■□□□□ 0.47
HOMER3-205ENST00000542541 MBD2Q9UBB5 411 aa17.96■□□□□ 0.47
HOMER3-205ENST00000542541 MT-CO2P00403 227 aa17.95■□□□□ 0.46
HOMER3-205ENST00000542541 KRTAP10-3P60369 221 aa17.95■□□□□ 0.46
HOMER3-205ENST00000542541 AKAP14Q86UN6 197 aa17.95■□□□□ 0.46
HOMER3-205ENST00000542541 ZNF747Q9BV97 191 aa17.95■□□□□ 0.46
HOMER3-205ENST00000542541 SLC25A31Q9H0C2 315 aa17.95■□□□□ 0.46
HOMER3-205ENST00000542541 TRAV14DV4A0A0A6YYC5 116 aa17.94■□□□□ 0.46
HOMER3-205ENST00000542541 I3L2K1 104 aa17.94■□□□□ 0.46
HOMER3-205ENST00000542541 LYL1P12980 280 aa17.94■□□□□ 0.46
HOMER3-205ENST00000542541 KRTAP21-3Q3LHN1 58 aa17.94■□□□□ 0.46
HOMER3-205ENST00000542541 FAM209BQ5JX69 171 aa17.94■□□□□ 0.46
HOMER3-205ENST00000542541 EEF1AKMT3Q96AZ1 226 aa17.94■□□□□ 0.46
HOMER3-205ENST00000542541 TRBV7-1A0A0A6YYK4 115 aa17.94■□□□□ 0.46
HOMER3-205ENST00000542541 FAM24AA6NFZ4 105 aa17.94■□□□□ 0.46
HOMER3-205ENST00000542541 K7EIM0 57 aa17.94■□□□□ 0.46
HOMER3-205ENST00000542541 METTL15P1P0C7V9 234 aa17.94■□□□□ 0.46
HOMER3-205ENST00000542541 Q5BKY6 102 aa17.94■□□□□ 0.46
HOMER3-205ENST00000542541 STX12Q86Y82 276 aa17.94■□□□□ 0.46
HOMER3-205ENST00000542541 TMEM252Q8N6L7 170 aa17.94■□□□□ 0.46
HOMER3-205ENST00000542541 OR10P1Q8NGE3 313 aa17.94■□□□□ 0.46
HOMER3-205ENST00000542541 SCARB1Q8WTV0 552 aa17.94■□□□□ 0.46
HOMER3-205ENST00000542541 DCUN1D4Q92564 292 aa17.94■□□□□ 0.46
HOMER3-205ENST00000542541 CITED1Q99966 193 aa17.94■□□□□ 0.46
HOMER3-205ENST00000542541 GPX4P36969 197 aaPredicted RBP17.93■□□□□ 0.46
HOMER3-205ENST00000542541 DEFA5Q01523 94 aa17.93■□□□□ 0.46
HOMER3-205ENST00000542541 CACNG8Q8WXS5 425 aa17.93■□□□□ 0.46
HOMER3-205ENST00000542541 ST6GAL2Q96JF0 529 aa17.93■□□□□ 0.46
HOMER3-205ENST00000542541 TENM1Q9UKZ4 2725 aa17.92■□□□□ 0.46
HOMER3-205ENST00000542541 SLC25A4P12235 298 aa17.92■□□□□ 0.46
HOMER3-205ENST00000542541 SULT1A1P50225 295 aa17.92■□□□□ 0.46
HOMER3-205ENST00000542541 CD69Q07108 199 aa17.92■□□□□ 0.46
HOMER3-205ENST00000542541 OR8G2PQ6IF36 304 aa17.92■□□□□ 0.46
HOMER3-205ENST00000542541 NDUFA11Q86Y39 141 aa17.92■□□□□ 0.46
HOMER3-205ENST00000542541 C21orf62Q9NYP8 219 aa17.92■□□□□ 0.46
HOMER3-205ENST00000542541 NUDT19A8MXV4 375 aa17.91■□□□□ 0.46
HOMER3-205ENST00000542541 IGHV3-11P01762 117 aa17.91■□□□□ 0.46
HOMER3-205ENST00000542541 NUP62P37198 522 aaPredicted RBP17.91■□□□□ 0.46
HOMER3-205ENST00000542541 MFAP4P55083 255 aa17.91■□□□□ 0.46
HOMER3-205ENST00000542541 ZNF343Q6P1L6 599 aa17.91■□□□□ 0.46
HOMER3-205ENST00000542541 TCTE3Q8IZS6 198 aa17.91■□□□□ 0.46
HOMER3-205ENST00000542541 C4orf3Q8WVX3 66 aa17.91■□□□□ 0.46
HOMER3-205ENST00000542541 ATP6V0BQ99437 205 aa17.91■□□□□ 0.46
HOMER3-205ENST00000542541 MDFIQ99750 246 aa17.91■□□□□ 0.46
HOMER3-205ENST00000542541 FNDC4Q9H6D8 234 aaPredicted RBP17.91■□□□□ 0.46
HOMER3-205ENST00000542541 GAR1Q9NY12 217 aaKnown RBP17.91■□□□□ 0.46
HOMER3-205ENST00000542541 IGHV3-21A0A0B4J1V1 117 aa17.9■□□□□ 0.46
HOMER3-205ENST00000542541 MFSD2BA6NFX1 497 aa17.9■□□□□ 0.46
HOMER3-205ENST00000542541 LGALS1P09382 135 aaKnown RBP17.9■□□□□ 0.46
HOMER3-205ENST00000542541 SHISA2Q6UWI4 295 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms