RNA–Protein interactions for RNA: ENST00000542340.1

CACNA2D4-215, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 3

Gene CACNA2D4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-215ENST00000542340 SUB1P53999 127 aaKnown RBP eCLIP15.22■□□□□ 0.03
CACNA2D4-215ENST00000542340 SRPXP78539 464 aa15.22■□□□□ 0.03
CACNA2D4-215ENST00000542340 TMEM128Q5BJH2 165 aa15.22■□□□□ 0.03
CACNA2D4-215ENST00000542340 TRIQKQ629K1 86 aa15.22■□□□□ 0.03
CACNA2D4-215ENST00000542340 TMED4Q7Z7H5 227 aa15.22■□□□□ 0.03
CACNA2D4-215ENST00000542340 PALMDQ9NP74 551 aa15.22■□□□□ 0.03
CACNA2D4-215ENST00000542340 ENY2Q9NPA8 101 aa15.22■□□□□ 0.03
CACNA2D4-215ENST00000542340 TECRQ9NZ01 308 aaKnown RBP15.22■□□□□ 0.03
CACNA2D4-215ENST00000542340 CACNG5Q9UF02 275 aa15.22■□□□□ 0.03
CACNA2D4-215ENST00000542340 CACFD1Q9UGQ2 172 aa15.22■□□□□ 0.03
CACNA2D4-215ENST00000542340 A0A0B4J2A0 478 aa15.21■□□□□ 0.03
CACNA2D4-215ENST00000542340 PIGBOS1A0A0B4J2F0 54 aa15.21■□□□□ 0.03
CACNA2D4-215ENST00000542340 TMEM213A2RRL7 107 aa15.21■□□□□ 0.03
CACNA2D4-215ENST00000542340 NAP1L6A6NFF2 107 aa15.21■□□□□ 0.03
CACNA2D4-215ENST00000542340 MT-CO2P00403 227 aa15.21■□□□□ 0.03
CACNA2D4-215ENST00000542340 FCGR2BP31994 310 aaPredicted RBP15.21■□□□□ 0.03
CACNA2D4-215ENST00000542340 MFAP4P55083 255 aa15.21■□□□□ 0.03
CACNA2D4-215ENST00000542340 DEFB114Q30KQ6 69 aa15.21■□□□□ 0.03
CACNA2D4-215ENST00000542340 PVRIGQ6DKI7 326 aa15.21■□□□□ 0.03
CACNA2D4-215ENST00000542340 UNQ9165/PRO28630Q6UXU0 137 aa15.21■□□□□ 0.03
CACNA2D4-215ENST00000542340 LGI3Q8N145 548 aa15.21■□□□□ 0.03
CACNA2D4-215ENST00000542340 DYNLRB2Q8TF09 96 aa15.21■□□□□ 0.03
CACNA2D4-215ENST00000542340 SDHCQ99643 169 aaPredicted RBP15.21■□□□□ 0.03
CACNA2D4-215ENST00000542340 TXN2Q99757 166 aa15.21■□□□□ 0.03
CACNA2D4-215ENST00000542340 PRR13Q9NZ81 148 aa15.21■□□□□ 0.03
CACNA2D4-215ENST00000542340 SHPKQ9UHJ6 478 aa15.21■□□□□ 0.03
CACNA2D4-215ENST00000542340 COL7A1Q02388 2944 aa15.2■□□□□ 0.02
CACNA2D4-215ENST00000542340 IZUMO1RA6ND01 250 aa15.2■□□□□ 0.02
CACNA2D4-215ENST00000542340 ELLP55199 621 aaPredicted RBP15.2■□□□□ 0.02
CACNA2D4-215ENST00000542340 CD300EQ496F6 205 aaPredicted RBP15.2■□□□□ 0.02
CACNA2D4-215ENST00000542340 Q56UQ5 140 aa15.2■□□□□ 0.02
CACNA2D4-215ENST00000542340 Q8N1Y9 231 aa15.2■□□□□ 0.02
CACNA2D4-215ENST00000542340 UBAC2Q8NBM4 344 aa15.2■□□□□ 0.02
CACNA2D4-215ENST00000542340 MARC2Q969Z3 335 aa15.2■□□□□ 0.02
CACNA2D4-215ENST00000542340 UFC1Q9Y3C8 167 aa15.2■□□□□ 0.02
CACNA2D4-215ENST00000542340 IGHV3-35A0A0C4DH35 117 aa15.19■□□□□ 0.02
CACNA2D4-215ENST00000542340 CORTO00230 105 aa15.19■□□□□ 0.02
CACNA2D4-215ENST00000542340 NDUFA4O00483 81 aa15.19■□□□□ 0.02
CACNA2D4-215ENST00000542340 CTSGP08311 255 aa15.19■□□□□ 0.02
CACNA2D4-215ENST00000542340 NHLRC4P0CG21 123 aaPredicted RBP15.19■□□□□ 0.02
CACNA2D4-215ENST00000542340 SULT1A3P0DMM9 295 aa15.19■□□□□ 0.02
CACNA2D4-215ENST00000542340 SULT1A4P0DMN0 295 aa15.19■□□□□ 0.02
CACNA2D4-215ENST00000542340 RNASE2P10153 161 aaKnown RBP15.19■□□□□ 0.02
CACNA2D4-215ENST00000542340 EDN2P20800 178 aa15.19■□□□□ 0.02
CACNA2D4-215ENST00000542340 ADMP35318 185 aa15.19■□□□□ 0.02
CACNA2D4-215ENST00000542340 RBMS2Q15434 407 aaKnown RBP15.19■□□□□ 0.02
CACNA2D4-215ENST00000542340 BSXQ3C1V8 233 aa15.19■□□□□ 0.02
CACNA2D4-215ENST00000542340 LYZL2Q7Z4W2 148 aa15.19■□□□□ 0.02
CACNA2D4-215ENST00000542340 PINX1Q96BK5 328 aaKnown RBP15.19■□□□□ 0.02
CACNA2D4-215ENST00000542340 CHRDL1Q9BU40 450 aa15.19■□□□□ 0.02
CACNA2D4-215ENST00000542340 C8orf88P0DMB2 117 aa15.18■□□□□ 0.02
CACNA2D4-215ENST00000542340 CCR6P51684 374 aa15.18■□□□□ 0.02
CACNA2D4-215ENST00000542340 TM4SF20Q53R12 229 aa15.18■□□□□ 0.02
CACNA2D4-215ENST00000542340 NMSQ5H8A3 153 aa15.18■□□□□ 0.02
CACNA2D4-215ENST00000542340 UXS1Q8NBZ7 420 aa15.18■□□□□ 0.02
CACNA2D4-215ENST00000542340 CACNG8Q8WXS5 425 aa15.18■□□□□ 0.02
CACNA2D4-215ENST00000542340 TMEM190Q8WZ59 177 aa15.18■□□□□ 0.02
CACNA2D4-215ENST00000542340 MRPL27Q9P0M9 148 aaKnown RBP15.18■□□□□ 0.02
CACNA2D4-215ENST00000542340 DUXBA0A1W2PPF3 345 aa15.17■□□□□ 0.02
CACNA2D4-215ENST00000542340 NUPL2O15504 423 aaKnown RBP15.17■□□□□ 0.02
CACNA2D4-215ENST00000542340 IL7P13232 177 aa15.17■□□□□ 0.02
CACNA2D4-215ENST00000542340 VAMP1P23763 118 aa15.17■□□□□ 0.02
CACNA2D4-215ENST00000542340 HTR2BP41595 481 aa15.17■□□□□ 0.02
CACNA2D4-215ENST00000542340 GTSCR1Q86UQ5 136 aa15.17■□□□□ 0.02
CACNA2D4-215ENST00000542340 CENPSQ8N2Z9 138 aa15.17■□□□□ 0.02
CACNA2D4-215ENST00000542340 HEYLQ9NQ87 328 aaPredicted RBP15.17■□□□□ 0.02
CACNA2D4-215ENST00000542340 ZNF785A8K8V0 405 aa15.16■□□□□ 0.02
CACNA2D4-215ENST00000542340 CENPXA8MT69 81 aa15.16■□□□□ 0.02
CACNA2D4-215ENST00000542340 CEBPZOSA8MTT3 80 aa15.16■□□□□ 0.02
CACNA2D4-215ENST00000542340 IGHV3-48P01763 117 aa15.16■□□□□ 0.02
CACNA2D4-215ENST00000542340 NPBWR1P48145 328 aa15.16■□□□□ 0.02
CACNA2D4-215ENST00000542340 RELQ04864 619 aaPredicted RBP15.16■□□□□ 0.02
CACNA2D4-215ENST00000542340 SMCO1Q147U7 214 aa15.16■□□□□ 0.02
CACNA2D4-215ENST00000542340 LINC00299Q6ZSB3 139 aa15.16■□□□□ 0.02
CACNA2D4-215ENST00000542340 LRTM2Q8N967 370 aa15.16■□□□□ 0.02
CACNA2D4-215ENST00000542340 DUSP18Q8NEJ0 188 aa15.16■□□□□ 0.02
CACNA2D4-215ENST00000542340 C7orf50Q9BRJ6 194 aaKnown RBP15.16■□□□□ 0.02
CACNA2D4-215ENST00000542340 DAZ1Q9NQZ3 744 aaKnown RBP15.16■□□□□ 0.02
CACNA2D4-215ENST00000542340 DNAH9Q9NYC9 4486 aa15.16■□□□□ 0.02
CACNA2D4-215ENST00000542340 A0A1B0GU03 582 aa15.15■□□□□ 0.02
CACNA2D4-215ENST00000542340 A8MZ25 164 aa15.15■□□□□ 0.02
CACNA2D4-215ENST00000542340 K7EMT4 169 aa15.15■□□□□ 0.02
CACNA2D4-215ENST00000542340 GNG7O60262 68 aa15.15■□□□□ 0.02
CACNA2D4-215ENST00000542340 NDUFB6O95139 128 aa15.15■□□□□ 0.02
CACNA2D4-215ENST00000542340 SFT2D2O95562 160 aa15.15■□□□□ 0.02
CACNA2D4-215ENST00000542340 FRMD6-AS1P0C7T7 363 aa15.15■□□□□ 0.02
CACNA2D4-215ENST00000542340 UBE2MP61081 183 aaKnown RBP15.15■□□□□ 0.02
CACNA2D4-215ENST00000542340 PPP1R1AQ13522 171 aa15.15■□□□□ 0.02
CACNA2D4-215ENST00000542340 ANKRD55Q3KP44 614 aa15.15■□□□□ 0.02
CACNA2D4-215ENST00000542340 MLXQ9UH92 298 aa15.15■□□□□ 0.02
CACNA2D4-215ENST00000542340 LINC00854A0A1B0GVQ3 168 aa15.14■□□□□ 0.01
CACNA2D4-215ENST00000542340 A6NHS1 94 aa15.14■□□□□ 0.01
CACNA2D4-215ENST00000542340 IGHV4-30-4P0DP06 118 aa15.14■□□□□ 0.01
CACNA2D4-215ENST00000542340 TNFRSF9Q07011 255 aa15.14■□□□□ 0.01
CACNA2D4-215ENST00000542340 C20orf24Q9BUV8 137 aa15.14■□□□□ 0.01
CACNA2D4-215ENST00000542340 HIPK2Q9H2X6 1198 aa15.14■□□□□ 0.01
CACNA2D4-215ENST00000542340 HSPB7Q9UBY9 170 aa15.14■□□□□ 0.01
CACNA2D4-215ENST00000542340 C15orf62A8K5M9 175 aa15.13■□□□□ 0.01
CACNA2D4-215ENST00000542340 C2orf83Q53S99 150 aa15.13■□□□□ 0.01
CACNA2D4-215ENST00000542340 C11orf87Q6NUJ2 197 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms