RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 ST8SIA3O43173 380 aa4.21□□□□□ -1.74
CPSF7-220ENST00000541963 CREBL2O60519 120 aaPredicted RBP4.21□□□□□ -1.74
CPSF7-220ENST00000541963 OR2A4O95047 310 aa4.21□□□□□ -1.74
CPSF7-220ENST00000541963 IFNA10P01566 189 aa4.21□□□□□ -1.74
CPSF7-220ENST00000541963 FABP1P07148 127 aa4.21□□□□□ -1.74
CPSF7-220ENST00000541963 NMBP08949 121 aa4.21□□□□□ -1.74
CPSF7-220ENST00000541963 RPA2P15927 270 aa4.21□□□□□ -1.74
CPSF7-220ENST00000541963 PPP1CCP36873 323 aaKnown RBP4.21□□□□□ -1.74
CPSF7-220ENST00000541963 CEACAM6P40199 344 aa4.21□□□□□ -1.74
CPSF7-220ENST00000541963 REG1BP48304 166 aa4.21□□□□□ -1.74
CPSF7-220ENST00000541963 ZNF137PP52743 207 aa4.21□□□□□ -1.74
CPSF7-220ENST00000541963 TMEM50BP56557 158 aa4.21□□□□□ -1.74
CPSF7-220ENST00000541963 OR10A3P58181 314 aa4.21□□□□□ -1.74
CPSF7-220ENST00000541963 KRTAP10-11P60412 298 aa4.21□□□□□ -1.74
CPSF7-220ENST00000541963 EIF5AP63241 154 aaKnown RBP4.21□□□□□ -1.74
CPSF7-220ENST00000541963 HLA-DRB3P79483 266 aa4.21□□□□□ -1.74
CPSF7-220ENST00000541963 SSBP1Q04837 148 aaKnown RBP4.21□□□□□ -1.74
CPSF7-220ENST00000541963 DIAPH2-AS1Q14236 149 aa4.21□□□□□ -1.74
CPSF7-220ENST00000541963 ZNF345Q14585 488 aa4.21□□□□□ -1.74
CPSF7-220ENST00000541963 FCN2Q15485 313 aa4.21□□□□□ -1.74
CPSF7-220ENST00000541963 ZNF674Q2M3X9 581 aa4.21□□□□□ -1.74
CPSF7-220ENST00000541963 LGALSLQ3ZCW2 172 aaPredicted RBP4.21□□□□□ -1.74
CPSF7-220ENST00000541963 UTF1Q5T230 341 aa4.21□□□□□ -1.74
CPSF7-220ENST00000541963 FAM71F2Q6NXP2 309 aa4.21□□□□□ -1.74
CPSF7-220ENST00000541963 SMIM29Q86T20 159 aa4.21□□□□□ -1.74
CPSF7-220ENST00000541963 COMMD1Q8N668 190 aa4.21□□□□□ -1.74
CPSF7-220ENST00000541963 ZNF439Q8NDP4 499 aa4.21□□□□□ -1.74
CPSF7-220ENST00000541963 OR4A4PQ8NGN8 299 aa4.21□□□□□ -1.74
CPSF7-220ENST00000541963 OR2T35Q8NGX2 323 aa4.21□□□□□ -1.74
CPSF7-220ENST00000541963 ARHGAP5-AS1Q96IT6 56 aa4.21□□□□□ -1.74
CPSF7-220ENST00000541963 OR2A7Q96R45 310 aa4.21□□□□□ -1.74
CPSF7-220ENST00000541963 SAV1Q9H4B6 383 aaPredicted RBP4.21□□□□□ -1.74
CPSF7-220ENST00000541963 NUDT15Q9NV35 164 aa4.21□□□□□ -1.74
CPSF7-220ENST00000541963 TAS2R8Q9NYW2 309 aa4.21□□□□□ -1.74
CPSF7-220ENST00000541963 SPATA2Q9UM82 520 aa4.21□□□□□ -1.74
CPSF7-220ENST00000541963 TET2Q6N021 2002 aaPredicted RBP4.21□□□□□ -1.74
CPSF7-220ENST00000541963 TRAV18A0A075B6X5 111 aa4.2□□□□□ -1.74
CPSF7-220ENST00000541963 IGHV3-72A0A0B4J1Y9 119 aa4.2□□□□□ -1.74
CPSF7-220ENST00000541963 PSMB11A5LHX3 300 aa4.2□□□□□ -1.74
CPSF7-220ENST00000541963 FOXI3A8MTJ6 420 aaPredicted RBP4.2□□□□□ -1.74
CPSF7-220ENST00000541963 SLC31A2O15432 143 aa4.2□□□□□ -1.74
CPSF7-220ENST00000541963 ATG12O94817 140 aa4.2□□□□□ -1.74
CPSF7-220ENST00000541963 DIRAS3O95661 229 aa4.2□□□□□ -1.74
CPSF7-220ENST00000541963 SCTP09683 121 aa4.2□□□□□ -1.74
CPSF7-220ENST00000541963 CTXN2P0C2S0 81 aa4.2□□□□□ -1.74
CPSF7-220ENST00000541963 CD28P10747 220 aa4.2□□□□□ -1.74
CPSF7-220ENST00000541963 GNB3P16520 340 aa4.2□□□□□ -1.74
CPSF7-220ENST00000541963 LINC01547P58512 204 aaPredicted RBP4.2□□□□□ -1.74
CPSF7-220ENST00000541963 OR2F1Q13607 317 aa4.2□□□□□ -1.74
CPSF7-220ENST00000541963 NSUN5P1Q3KNT7 163 aa4.2□□□□□ -1.74
CPSF7-220ENST00000541963 EIF5AL1Q6IS14 154 aaKnown RBP4.2□□□□□ -1.74
CPSF7-220ENST00000541963 GSG1LQ6UXU4 331 aa4.2□□□□□ -1.74
CPSF7-220ENST00000541963 ZNF833PQ6ZTB9 187 aa4.2□□□□□ -1.74
CPSF7-220ENST00000541963 SLC35E3Q7Z769 313 aa4.2□□□□□ -1.74
CPSF7-220ENST00000541963 C5orf56Q8N8D9 126 aa4.2□□□□□ -1.74
CPSF7-220ENST00000541963 BEST4Q8NFU0 473 aa4.2□□□□□ -1.74
CPSF7-220ENST00000541963 OR10J5Q8NHC4 309 aa4.2□□□□□ -1.74
CPSF7-220ENST00000541963 SFT2D1Q8WV19 159 aa4.2□□□□□ -1.74
CPSF7-220ENST00000541963 TCTEX1D2Q8WW35 142 aa4.2□□□□□ -1.74
CPSF7-220ENST00000541963 LINC00052Q96N35 136 aa4.2□□□□□ -1.74
CPSF7-220ENST00000541963 RNF5Q99942 180 aa4.2□□□□□ -1.74
CPSF7-220ENST00000541963 SRD5A3Q9H8P0 318 aa4.2□□□□□ -1.74
CPSF7-220ENST00000541963 GAB2Q9UQC2 676 aa4.2□□□□□ -1.74
CPSF7-220ENST00000541963 CARHSP1Q9Y2V2 147 aaKnown RBP4.2□□□□□ -1.74
CPSF7-220ENST00000541963 RBM7Q9Y580 266 aaKnown RBP4.2□□□□□ -1.74
CPSF7-220ENST00000541963 TSSC4Q9Y5U2 329 aaPredicted RBP4.2□□□□□ -1.74
CPSF7-220ENST00000541963 ETV7Q9Y603 341 aa4.2□□□□□ -1.74
CPSF7-220ENST00000541963 ANK2Q01484 3957 aa4.2□□□□□ -1.74
CPSF7-220ENST00000541963 A0A0A6YYH2 397 aa4.19□□□□□ -1.74
CPSF7-220ENST00000541963 OR5H14A6NHG9 310 aa4.19□□□□□ -1.74
CPSF7-220ENST00000541963 A6NJ64 397 aa4.19□□□□□ -1.74
CPSF7-220ENST00000541963 C1orf196B1AJZ1 125 aa4.19□□□□□ -1.74
CPSF7-220ENST00000541963 DISC1C4P0D8 188 aa4.19□□□□□ -1.74
CPSF7-220ENST00000541963 PRSS46E5RG02 174 aa4.19□□□□□ -1.74
CPSF7-220ENST00000541963 DNASE2O00115 360 aaPredicted RBP4.19□□□□□ -1.74
CPSF7-220ENST00000541963 MFNGO00587 321 aa4.19□□□□□ -1.74
CPSF7-220ENST00000541963 SCO1O75880 301 aa4.19□□□□□ -1.74
CPSF7-220ENST00000541963 RBBP9O75884 186 aa4.19□□□□□ -1.74
CPSF7-220ENST00000541963 MPC2O95563 127 aa4.19□□□□□ -1.74
CPSF7-220ENST00000541963 IGHG2P01859 326 aa4.19□□□□□ -1.74
CPSF7-220ENST00000541963 APOC3P02656 99 aa4.19□□□□□ -1.74
CPSF7-220ENST00000541963 FCGR3AP08637 254 aa4.19□□□□□ -1.74
CPSF7-220ENST00000541963 OR5H8P0DN80 308 aa4.19□□□□□ -1.74
CPSF7-220ENST00000541963 HIST1H1DP16402 221 aaKnown RBP4.19□□□□□ -1.74
CPSF7-220ENST00000541963 VDAC1P21796 283 aa4.19□□□□□ -1.74
CPSF7-220ENST00000541963 DTYMKP23919 212 aa4.19□□□□□ -1.74
CPSF7-220ENST00000541963 TGFBR1P36897 503 aa4.19□□□□□ -1.74
CPSF7-220ENST00000541963 NKX2-1P43699 371 aaPredicted RBP4.19□□□□□ -1.74
CPSF7-220ENST00000541963 RAB5CP51148 216 aa4.19□□□□□ -1.74
CPSF7-220ENST00000541963 MXD1Q05195 221 aa4.19□□□□□ -1.74
CPSF7-220ENST00000541963 GNMTQ14749 295 aa4.19□□□□□ -1.74
CPSF7-220ENST00000541963 MMDQ15546 238 aa4.19□□□□□ -1.74
CPSF7-220ENST00000541963 FAM53AQ6NSI3 398 aaPredicted RBP4.19□□□□□ -1.74
CPSF7-220ENST00000541963 SFXN4Q6P4A7 337 aa4.19□□□□□ -1.74
CPSF7-220ENST00000541963 BTNL8Q6UX41 500 aa4.19□□□□□ -1.74
CPSF7-220ENST00000541963 IL34Q6ZMJ4 242 aa4.19□□□□□ -1.74
CPSF7-220ENST00000541963 Q8N6K4 173 aa4.19□□□□□ -1.74
CPSF7-220ENST00000541963 C15orf54Q8N8G6 183 aa4.19□□□□□ -1.74
CPSF7-220ENST00000541963 Q8N9W7 124 aa4.19□□□□□ -1.74
CPSF7-220ENST00000541963 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms