RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 PARD6GQ9BYG4 376 aaPredicted RBP22■■□□□ 1.11
CCM2-218ENST00000541586 WDR61Q9GZS3 305 aaKnown RBP22■■□□□ 1.11
CCM2-218ENST00000541586 MRPL41Q8IXM3 137 aaKnown RBP21.99■■□□□ 1.11
CCM2-218ENST00000541586 RNF141Q8WVD5 230 aa21.99■■□□□ 1.11
CCM2-218ENST00000541586 GNPNAT1Q96EK6 184 aaPredicted RBP21.99■■□□□ 1.11
CCM2-218ENST00000541586 GGACTQ9BVM4 153 aa21.99■■□□□ 1.11
CCM2-218ENST00000541586 REG1AP05451 166 aa21.98■■□□□ 1.11
CCM2-218ENST00000541586 APELAP0DMC3 54 aa21.98■■□□□ 1.11
CCM2-218ENST00000541586 AREGP15514 252 aa21.98■■□□□ 1.11
CCM2-218ENST00000541586 VPREB3Q9UKI3 123 aa21.98■■□□□ 1.11
CCM2-218ENST00000541586 DLK1P80370 383 aa21.97■■□□□ 1.11
CCM2-218ENST00000541586 FXYD3Q14802 87 aa21.97■■□□□ 1.11
CCM2-218ENST00000541586 TMEM86BQ8N661 226 aa21.97■■□□□ 1.11
CCM2-218ENST00000541586 P2RX4Q99571 388 aa21.97■■□□□ 1.11
CCM2-218ENST00000541586 PITPNC1Q9UKF7 332 aa21.97■■□□□ 1.11
CCM2-218ENST00000541586 FGF16O43320 207 aa21.97■■□□□ 1.11
CCM2-218ENST00000541586 SULT1A2P50226 295 aa21.97■■□□□ 1.11
CCM2-218ENST00000541586 ZNF562Q6V9R5 426 aa21.97■■□□□ 1.11
CCM2-218ENST00000541586 OR2G3Q8NGZ4 309 aa21.97■■□□□ 1.11
CCM2-218ENST00000541586 TAF15Q92804 592 aaKnown RBP eCLIP21.97■■□□□ 1.11
CCM2-218ENST00000541586 SUB1P53999 127 aaKnown RBP eCLIP21.96■■□□□ 1.11
CCM2-218ENST00000541586 CX3CL1P78423 397 aa21.96■■□□□ 1.11
CCM2-218ENST00000541586 RSG1Q9BU20 258 aa21.96■■□□□ 1.11
CCM2-218ENST00000541586 A6NDX4 124 aa21.95■■□□□ 1.1
CCM2-218ENST00000541586 LRRC20Q8TCA0 184 aa21.95■■□□□ 1.1
CCM2-218ENST00000541586 SRSF8Q9BRL6 282 aaKnown RBP21.95■■□□□ 1.1
CCM2-218ENST00000541586 MDKP21741 143 aaPredicted RBP21.94■■□□□ 1.1
CCM2-218ENST00000541586 HSD17B13Q7Z5P4 300 aaPredicted RBP21.94■■□□□ 1.1
CCM2-218ENST00000541586 ZNF114Q8NC26 417 aa21.94■■□□□ 1.1
CCM2-218ENST00000541586 CXorf58Q96LI9 332 aa21.94■■□□□ 1.1
CCM2-218ENST00000541586 RASL11BQ9BPW5 248 aa21.94■■□□□ 1.1
CCM2-218ENST00000541586 SMCO3A2RU48 225 aa21.94■■□□□ 1.1
CCM2-218ENST00000541586 LINC00862A6NCI5 91 aa21.94■■□□□ 1.1
CCM2-218ENST00000541586 FGF7P21781 194 aa21.94■■□□□ 1.1
CCM2-218ENST00000541586 ARSJQ5FYB0 599 aaPredicted RBP21.94■■□□□ 1.1
CCM2-218ENST00000541586 TMEM182Q6ZP80 229 aaPredicted RBP21.94■■□□□ 1.1
CCM2-218ENST00000541586 PRIMA1Q86XR5 153 aa21.94■■□□□ 1.1
CCM2-218ENST00000541586 RBM14Q96PK6 669 aaKnown RBP21.94■■□□□ 1.1
CCM2-218ENST00000541586 SLC25A33Q9BSK2 321 aa21.94■■□□□ 1.1
CCM2-218ENST00000541586 ZNF705EA8MWA4 302 aaPredicted RBP21.93■■□□□ 1.1
CCM2-218ENST00000541586 CLDN34H7C241 214 aa21.93■■□□□ 1.1
CCM2-218ENST00000541586 HLA-DRB1P01911 266 aa21.93■■□□□ 1.1
CCM2-218ENST00000541586 NDPQ00604 133 aa21.93■■□□□ 1.1
CCM2-218ENST00000541586 ABHD5Q8WTS1 349 aa21.93■■□□□ 1.1
CCM2-218ENST00000541586 ARPC1AQ92747 370 aa21.93■■□□□ 1.1
CCM2-218ENST00000541586 FAM103A1Q9BTL3 118 aaKnown RBP21.93■■□□□ 1.1
CCM2-218ENST00000541586 FAM181BA6NEQ2 426 aa21.92■■□□□ 1.1
CCM2-218ENST00000541586 C19orf35Q6ZS72 473 aa21.92■■□□□ 1.1
CCM2-218ENST00000541586 WDR83OSQ9Y284 106 aa21.92■■□□□ 1.1
CCM2-218ENST00000541586 NF1P21359 2839 aa21.92■■□□□ 1.1
CCM2-218ENST00000541586 IGHV7-81A0A0B4J1V7 117 aa21.92■■□□□ 1.1
CCM2-218ENST00000541586 BTNL8Q6UX41 500 aa21.92■■□□□ 1.1
CCM2-218ENST00000541586 TREML4Q6UXN2 200 aa21.92■■□□□ 1.1
CCM2-218ENST00000541586 RNASEH2CQ8TDP1 164 aaKnown RBP21.92■■□□□ 1.1
CCM2-218ENST00000541586 PSMG3Q9BT73 122 aaPredicted RBP21.92■■□□□ 1.1
CCM2-218ENST00000541586 FBXO7Q9Y3I1 522 aa21.92■■□□□ 1.1
CCM2-218ENST00000541586 TRIM77I1YAP6 450 aa21.91■■□□□ 1.1
CCM2-218ENST00000541586 ATP6V1G1O75348 118 aa21.91■■□□□ 1.1
CCM2-218ENST00000541586 RNASE1P07998 156 aaKnown RBP21.91■■□□□ 1.1
CCM2-218ENST00000541586 MFAP2P55001 183 aa21.91■■□□□ 1.1
CCM2-218ENST00000541586 PVRIGQ6DKI7 326 aa21.91■■□□□ 1.1
CCM2-218ENST00000541586 C5orf56Q8N8D9 126 aa21.91■■□□□ 1.1
CCM2-218ENST00000541586 MOB4Q9Y3A3 225 aa21.91■■□□□ 1.1
CCM2-218ENST00000541586 FNDC10F2Z333 226 aa21.9■■□□□ 1.1
CCM2-218ENST00000541586 CD69Q07108 199 aa21.9■■□□□ 1.1
CCM2-218ENST00000541586 OR1P1Q8NH06 330 aa21.9■■□□□ 1.1
CCM2-218ENST00000541586 SAT2Q96F10 170 aaPredicted RBP21.9■■□□□ 1.1
CCM2-218ENST00000541586 NPCDR1Q9BY65 106 aa21.9■■□□□ 1.1
CCM2-218ENST00000541586 NPVFQ9HCQ7 196 aa21.9■■□□□ 1.1
CCM2-218ENST00000541586 F11RQ9Y624 299 aaKnown RBP21.9■■□□□ 1.1
CCM2-218ENST00000541586 RAB5CP51148 216 aa21.89■■□□□ 1.1
CCM2-218ENST00000541586 MLANAQ16655 118 aa21.89■■□□□ 1.1
CCM2-218ENST00000541586 HSPB9Q9BQS6 159 aa21.89■■□□□ 1.1
CCM2-218ENST00000541586 TIMM9Q9Y5J7 89 aa21.89■■□□□ 1.1
CCM2-218ENST00000541586 UMAD1C9J7I0 102 aa21.89■■□□□ 1.09
CCM2-218ENST00000541586 CRYBA1P05813 215 aa21.89■■□□□ 1.09
CCM2-218ENST00000541586 CENPVQ7Z7K6 275 aaPredicted RBP21.89■■□□□ 1.09
CCM2-218ENST00000541586 PRH1P02810 166 aa21.88■■□□□ 1.09
CCM2-218ENST00000541586 GPX4P36969 197 aaPredicted RBP21.88■■□□□ 1.09
CCM2-218ENST00000541586 FHITP49789 147 aa21.88■■□□□ 1.09
CCM2-218ENST00000541586 CACNG8Q8WXS5 425 aa21.88■■□□□ 1.09
CCM2-218ENST00000541586 CTRB1P17538 263 aa21.87■■□□□ 1.09
CCM2-218ENST00000541586 AKR1C1Q04828 323 aa21.87■■□□□ 1.09
CCM2-218ENST00000541586 ASPHD1Q5U4P2 390 aa21.87■■□□□ 1.09
CCM2-218ENST00000541586 CTRB2Q6GPI1 263 aa21.87■■□□□ 1.09
CCM2-218ENST00000541586 FNDC4Q9H6D8 234 aaPredicted RBP21.87■■□□□ 1.09
CCM2-218ENST00000541586 LSM4Q9Y4Z0 139 aaKnown RBP21.87■■□□□ 1.09
CCM2-218ENST00000541586 DMRT1Q9Y5R6 373 aa21.87■■□□□ 1.09
CCM2-218ENST00000541586 SH2D7A6NKC9 451 aaPredicted RBP21.86■■□□□ 1.09
CCM2-218ENST00000541586 MPDU1O75352 247 aa21.86■■□□□ 1.09
CCM2-218ENST00000541586 EGR2P11161 476 aaPredicted RBP21.86■■□□□ 1.09
CCM2-218ENST00000541586 OPRK1P41145 380 aa21.86■■□□□ 1.09
CCM2-218ENST00000541586 SERF2P84101 59 aa21.86■■□□□ 1.09
CCM2-218ENST00000541586 GAMTQ14353 236 aa21.86■■□□□ 1.09
CCM2-218ENST00000541586 AKR1C8PQ5T2L2 129 aa21.86■■□□□ 1.09
CCM2-218ENST00000541586 Q6ZRG5 221 aa21.86■■□□□ 1.09
CCM2-218ENST00000541586 SLC16A13Q7RTY0 426 aa21.86■■□□□ 1.09
CCM2-218ENST00000541586 MISP3Q96FF7 219 aa21.86■■□□□ 1.09
CCM2-218ENST00000541586 WNT10AQ9GZT5 417 aa21.86■■□□□ 1.09
CCM2-218ENST00000541586 TEX46H3BTG2 121 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms