RNA–Protein interactions for RNA: ENST00000541548.5

CUL3-214, Transcript of cullin 3, humanhuman

TSL 4

Gene CUL3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-214ENST00000541548 MEIKINA0A087WXM9 373 aa1.01□□□□□ -2.25
CUL3-214ENST00000541548 TRAV26-2A0A0B4J265 109 aa1.01□□□□□ -2.25
CUL3-214ENST00000541548 TMEM114B3SHH9 223 aa1.01□□□□□ -2.25
CUL3-214ENST00000541548 LYNX1P0DP58 116 aa1.01□□□□□ -2.25
CUL3-214ENST00000541548 SPI1P17947 270 aa1.01□□□□□ -2.25
CUL3-214ENST00000541548 NFYAP23511 347 aaPredicted RBP1.01□□□□□ -2.25
CUL3-214ENST00000541548 FKBP2P26885 142 aaKnown RBP1.01□□□□□ -2.25
CUL3-214ENST00000541548 FXYD2P54710 66 aa1.01□□□□□ -2.25
CUL3-214ENST00000541548 LSM6P62312 80 aaKnown RBP1.01□□□□□ -2.25
CUL3-214ENST00000541548 KHDC3LQ587J8 217 aa1.01□□□□□ -2.25
CUL3-214ENST00000541548 SPANXN3Q5MJ09 141 aa1.01□□□□□ -2.25
CUL3-214ENST00000541548 LPCAT3Q6P1A2 487 aa1.01□□□□□ -2.25
CUL3-214ENST00000541548 DPPA3Q6W0C5 159 aa1.01□□□□□ -2.25
CUL3-214ENST00000541548 KRT222Q8N1A0 295 aa1.01□□□□□ -2.25
CUL3-214ENST00000541548 ZNF565Q8N9K5 539 aa1.01□□□□□ -2.25
CUL3-214ENST00000541548 OR52R1Q8NGF1 315 aa1.01□□□□□ -2.25
CUL3-214ENST00000541548 RASSF5Q8WWW0 418 aa1.01□□□□□ -2.25
CUL3-214ENST00000541548 C11orf40Q8WZ69 217 aa1.01□□□□□ -2.25
CUL3-214ENST00000541548 H1FXQ92522 213 aaKnown RBP1.01□□□□□ -2.25
CUL3-214ENST00000541548 ITFG2Q969R8 447 aa1.01□□□□□ -2.25
CUL3-214ENST00000541548 DGCR14Q96DF8 476 aaKnown RBP1.01□□□□□ -2.25
CUL3-214ENST00000541548 ADAT1Q9BUB4 502 aaKnown RBP1.01□□□□□ -2.25
CUL3-214ENST00000541548 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.01□□□□□ -2.25
CUL3-214ENST00000541548 PRELID3BQ9Y3B1 194 aa1.01□□□□□ -2.25
CUL3-214ENST00000541548 DIDO1Q9BTC0 2240 aaKnown RBP1.01□□□□□ -2.25
CUL3-214ENST00000541548 ARFGEF3Q5TH69 2177 aa1.01□□□□□ -2.25
CUL3-214ENST00000541548 HEATR5BQ9P2D3 2071 aa1.01□□□□□ -2.25
CUL3-214ENST00000541548 MICAL3Q7RTP6 2002 aa1.01□□□□□ -2.25
CUL3-214ENST00000541548 GLI3P10071 1580 aa1□□□□□ -2.25
CUL3-214ENST00000541548 MED12LQ86YW9 2145 aa1□□□□□ -2.25
CUL3-214ENST00000541548 A0A087WUJ7 227 aa1□□□□□ -2.25
CUL3-214ENST00000541548 PQLC2LA1A4F0 135 aa1□□□□□ -2.25
CUL3-214ENST00000541548 SMIM9A6NGZ8 99 aa1□□□□□ -2.25
CUL3-214ENST00000541548 C1orf196B1AJZ1 125 aa1□□□□□ -2.25
CUL3-214ENST00000541548 KPNA3O00505 521 aaPredicted RBP1□□□□□ -2.25
CUL3-214ENST00000541548 PIRO00625 290 aa1□□□□□ -2.25
CUL3-214ENST00000541548 SERPINA6P08185 405 aa1□□□□□ -2.25
CUL3-214ENST00000541548 METTL15P1P0C7V9 234 aa1□□□□□ -2.25
CUL3-214ENST00000541548 SMIM17P0DL12 118 aa1□□□□□ -2.25
CUL3-214ENST00000541548 CDK10Q15131 360 aa1□□□□□ -2.25
CUL3-214ENST00000541548 MIR17HGQ75NE6 70 aa1□□□□□ -2.25
CUL3-214ENST00000541548 LINC00471Q8N535 108 aa1□□□□□ -2.25
CUL3-214ENST00000541548 DEFB119Q8N690 84 aa1□□□□□ -2.25
CUL3-214ENST00000541548 OR5A1Q8NGJ0 315 aa1□□□□□ -2.25
CUL3-214ENST00000541548 TOMM6Q96B49 74 aa1□□□□□ -2.25
CUL3-214ENST00000541548 TSPAN32Q96QS1 320 aa1□□□□□ -2.25
CUL3-214ENST00000541548 NIPSNAP1Q9BPW8 284 aa1□□□□□ -2.25
CUL3-214ENST00000541548 CMSS1Q9BQ75 279 aaKnown RBP1□□□□□ -2.25
CUL3-214ENST00000541548 CCDC90BQ9GZT6 254 aa1□□□□□ -2.25
CUL3-214ENST00000541548 RNASE7Q9H1E1 156 aaKnown RBP1□□□□□ -2.25
CUL3-214ENST00000541548 SLC39A9Q9NUM3 307 aa1□□□□□ -2.25
CUL3-214ENST00000541548 CKLFQ9UBR5 152 aa1□□□□□ -2.25
CUL3-214ENST00000541548 LHFPL6Q9Y693 200 aa1□□□□□ -2.25
CUL3-214ENST00000541548 TMEM56-RWDD3S4R434 201 aa1□□□□□ -2.25
CUL3-214ENST00000541548 RP1L1Q8IWN7 2480 aaPredicted RBP1□□□□□ -2.25
CUL3-214ENST00000541548 KIF13BQ9NQT8 1826 aa1□□□□□ -2.25
CUL3-214ENST00000541548 TONSLQ96HA7 1378 aa0.99□□□□□ -2.25
CUL3-214ENST00000541548 TRAV14DV4A0A0A6YYC5 116 aa0.99□□□□□ -2.25
CUL3-214ENST00000541548 TRAV1-1A0A0B4J248 108 aa0.99□□□□□ -2.25
CUL3-214ENST00000541548 BUB1B-PAK6H3BSN5 160 aa0.99□□□□□ -2.25
CUL3-214ENST00000541548 TTRP02766 147 aa0.99□□□□□ -2.25
CUL3-214ENST00000541548 ARL14EPLP0DKL9 152 aa0.99□□□□□ -2.25
CUL3-214ENST00000541548 ZNF80P51504 273 aaPredicted RBP0.99□□□□□ -2.25
CUL3-214ENST00000541548 STX5Q13190 355 aa0.99□□□□□ -2.25
CUL3-214ENST00000541548 OR4E2Q8NGC2 313 aa0.99□□□□□ -2.25
CUL3-214ENST00000541548 OR13C4Q8NGS5 318 aa0.99□□□□□ -2.25
CUL3-214ENST00000541548 SERPINI1Q99574 410 aa0.99□□□□□ -2.25
CUL3-214ENST00000541548 SLC50A1Q9BRV3 221 aa0.99□□□□□ -2.25
CUL3-214ENST00000541548 REG4Q9BYZ8 158 aa0.99□□□□□ -2.25
CUL3-214ENST00000541548 YIPF3Q9GZM5 350 aa0.99□□□□□ -2.25
CUL3-214ENST00000541548 DCSTAMPQ9H295 470 aa0.99□□□□□ -2.25
CUL3-214ENST00000541548 UQCC1Q9NVA1 299 aa0.99□□□□□ -2.25
CUL3-214ENST00000541548 GLTPQ9NZD2 209 aa0.99□□□□□ -2.25
CUL3-214ENST00000541548 CYSLTR1Q9Y271 337 aa0.99□□□□□ -2.25
CUL3-214ENST00000541548 ERGIC3Q9Y282 383 aa0.99□□□□□ -2.25
CUL3-214ENST00000541548 hCG_1818297A0A087WSY0 165 aa0.98□□□□□ -2.25
CUL3-214ENST00000541548 TRAV3A0A0B4J244 114 aa0.98□□□□□ -2.25
CUL3-214ENST00000541548 IGKV3D-7A0A0C4DH55 119 aa0.98□□□□□ -2.25
CUL3-214ENST00000541548 IGKV3OR2-268A0A0C4DH90 116 aa0.98□□□□□ -2.25
CUL3-214ENST00000541548 TRAPPC13A5PLN9 417 aa0.98□□□□□ -2.25
CUL3-214ENST00000541548 A8MT66 165 aa0.98□□□□□ -2.25
CUL3-214ENST00000541548 OR5F1O95221 314 aa0.98□□□□□ -2.25
CUL3-214ENST00000541548 CLPSP04118 112 aa0.98□□□□□ -2.25
CUL3-214ENST00000541548 HTR1AP08908 422 aa0.98□□□□□ -2.25
CUL3-214ENST00000541548 CDC42P60953 191 aa0.98□□□□□ -2.25
CUL3-214ENST00000541548 SRSF6Q13247 344 aaKnown RBP0.98□□□□□ -2.25
CUL3-214ENST00000541548 ZNF846Q147U1 533 aa0.98□□□□□ -2.25
CUL3-214ENST00000541548 S100A7AQ86SG5 101 aa0.98□□□□□ -2.25
CUL3-214ENST00000541548 TERB2Q8NHR7 220 aa0.98□□□□□ -2.25
CUL3-214ENST00000541548 PFN4Q8NHR9 129 aa0.98□□□□□ -2.25
CUL3-214ENST00000541548 C10orf105Q8TEF2 133 aa0.98□□□□□ -2.25
CUL3-214ENST00000541548 TRIM4Q9C037 500 aa0.98□□□□□ -2.25
CUL3-214ENST00000541548 PLB1Q6P1J6 1458 aa0.98□□□□□ -2.25
CUL3-214ENST00000541548 COL6A6A6NMZ7 2263 aa0.98□□□□□ -2.25
CUL3-214ENST00000541548 SCN10AQ9Y5Y9 1956 aa0.97□□□□□ -2.25
CUL3-214ENST00000541548 ROBO3Q96MS0 1386 aa0.97□□□□□ -2.25
CUL3-214ENST00000541548 IGKV2-40A0A087WW87 121 aaPredicted RBP0.97□□□□□ -2.25
CUL3-214ENST00000541548 hADV38S2A0JD32 116 aa0.97□□□□□ -2.25
CUL3-214ENST00000541548 CLDN25C9JDP6 229 aa0.97□□□□□ -2.25
CUL3-214ENST00000541548 FADS1O60427 444 aa0.97□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms