RNA–Protein interactions for RNA: ENST00000541416.5

SNHG1-216, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 996 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-216ENST00000541416 NSG2Q9Y328 171 aa8.92□□□□□ -0.98
SNHG1-216ENST00000541416 I3L2K1 104 aa8.91□□□□□ -0.98
SNHG1-216ENST00000541416 PGLYRP1O75594 196 aaPredicted RBP8.91□□□□□ -0.98
SNHG1-216ENST00000541416 MT-CO2P00403 227 aa8.91□□□□□ -0.98
SNHG1-216ENST00000541416 NPY1RP25929 384 aa8.91□□□□□ -0.98
SNHG1-216ENST00000541416 GNRHRP30968 328 aa8.91□□□□□ -0.98
SNHG1-216ENST00000541416 ERHP84090 104 aaKnown RBP8.91□□□□□ -0.98
SNHG1-216ENST00000541416 ZNF600Q6ZNG1 722 aa8.91□□□□□ -0.98
SNHG1-216ENST00000541416 Q6ZTC4 211 aa8.91□□□□□ -0.98
SNHG1-216ENST00000541416 POM121L12Q8N7R1 296 aa8.91□□□□□ -0.98
SNHG1-216ENST00000541416 ZNF114Q8NC26 417 aa8.91□□□□□ -0.98
SNHG1-216ENST00000541416 OR4A16Q8NH70 328 aa8.91□□□□□ -0.98
SNHG1-216ENST00000541416 FCAMRQ8WWV6 532 aa8.91□□□□□ -0.98
SNHG1-216ENST00000541416 ST8SIA2Q92186 375 aa8.91□□□□□ -0.98
SNHG1-216ENST00000541416 PINX1Q96BK5 328 aaKnown RBP8.91□□□□□ -0.98
SNHG1-216ENST00000541416 MOB3AQ96BX8 217 aa8.91□□□□□ -0.98
SNHG1-216ENST00000541416 ZNF414Q96IQ9 312 aa8.91□□□□□ -0.98
SNHG1-216ENST00000541416 NDUFAF3Q9BU61 184 aa8.91□□□□□ -0.98
SNHG1-216ENST00000541416 VSIRQ9H7M9 311 aa8.91□□□□□ -0.98
SNHG1-216ENST00000541416 TMEM14BQ9NUH8 114 aa8.91□□□□□ -0.98
SNHG1-216ENST00000541416 EHFQ9NZC4 300 aa8.91□□□□□ -0.98
SNHG1-216ENST00000541416 A0A1B0GVY2 172 aa8.9□□□□□ -0.98
SNHG1-216ENST00000541416 AMBPP02760 352 aa8.9□□□□□ -0.98
SNHG1-216ENST00000541416 RBMY1A1P0DJD3 496 aaKnown RBP8.9□□□□□ -0.98
SNHG1-216ENST00000541416 RBMY1CP0DJD4 496 aa8.9□□□□□ -0.98
SNHG1-216ENST00000541416 NPPCP23582 126 aa8.9□□□□□ -0.98
SNHG1-216ENST00000541416 HSPA13P48723 471 aa8.9□□□□□ -0.98
SNHG1-216ENST00000541416 EIF2B2P49770 351 aaKnown RBP8.9□□□□□ -0.98
SNHG1-216ENST00000541416 RBMY1FQ15415 496 aaKnown RBP8.9□□□□□ -0.98
SNHG1-216ENST00000541416 TOMM20LQ6UXN7 152 aa8.9□□□□□ -0.98
SNHG1-216ENST00000541416 GRAMD2BQ96HH9 432 aa8.9□□□□□ -0.98
SNHG1-216ENST00000541416 TBC1D24Q9ULP9 559 aa8.9□□□□□ -0.98
SNHG1-216ENST00000541416 DEFB131BA0A096LNP1 70 aa8.89□□□□□ -0.99
SNHG1-216ENST00000541416 ZNF705EA8MWA4 302 aaPredicted RBP8.89□□□□□ -0.99
SNHG1-216ENST00000541416 GPR31O00270 319 aa8.89□□□□□ -0.99
SNHG1-216ENST00000541416 FCER2P06734 321 aa8.89□□□□□ -0.99
SNHG1-216ENST00000541416 PSMB9P28065 219 aa8.89□□□□□ -0.99
SNHG1-216ENST00000541416 SNCAP37840 140 aa8.89□□□□□ -0.99
SNHG1-216ENST00000541416 TAS2R46P59540 309 aa8.89□□□□□ -0.99
SNHG1-216ENST00000541416 KCTD21Q4G0X4 260 aa8.89□□□□□ -0.99
SNHG1-216ENST00000541416 SOHLH1Q5JUK2 328 aa8.89□□□□□ -0.99
SNHG1-216ENST00000541416 DHRS11Q6UWP2 260 aa8.89□□□□□ -0.99
SNHG1-216ENST00000541416 H2BFWTQ7Z2G1 175 aa8.89□□□□□ -0.99
SNHG1-216ENST00000541416 TRPT1Q86TN4 253 aaKnown RBP8.89□□□□□ -0.99
SNHG1-216ENST00000541416 FCGR1BQ92637 280 aa8.89□□□□□ -0.99
SNHG1-216ENST00000541416 METTL26Q96S19 204 aa8.89□□□□□ -0.99
SNHG1-216ENST00000541416 ZNF2Q9BSG1 426 aaPredicted RBP8.89□□□□□ -0.99
SNHG1-216ENST00000541416 C1QTNF4Q9BXJ3 329 aa8.89□□□□□ -0.99
SNHG1-216ENST00000541416 AUNIPQ9H7T9 357 aa8.89□□□□□ -0.99
SNHG1-216ENST00000541416 FAM212BQ9NTI7 297 aaPredicted RBP8.89□□□□□ -0.99
SNHG1-216ENST00000541416 IGHV3-66A0A0C4DH42 116 aa8.88□□□□□ -0.99
SNHG1-216ENST00000541416 CORTO00230 105 aa8.88□□□□□ -0.99
SNHG1-216ENST00000541416 TMEM127O75204 238 aa8.88□□□□□ -0.99
SNHG1-216ENST00000541416 NUTF2P61970 127 aaKnown RBP8.88□□□□□ -0.99
SNHG1-216ENST00000541416 PRCDQ00LT1 54 aa8.88□□□□□ -0.99
SNHG1-216ENST00000541416 IDNKQ5T6J7 187 aa8.88□□□□□ -0.99
SNHG1-216ENST00000541416 UBE2UQ5VVX9 321 aa8.88□□□□□ -0.99
SNHG1-216ENST00000541416 LPCAT3Q6P1A2 487 aa8.88□□□□□ -0.99
SNHG1-216ENST00000541416 STXBP6Q8NFX7 210 aa8.88□□□□□ -0.99
SNHG1-216ENST00000541416 OR5H2Q8NGV7 314 aa8.88□□□□□ -0.99
SNHG1-216ENST00000541416 OR6F1Q8NGZ6 308 aa8.88□□□□□ -0.99
SNHG1-216ENST00000541416 CNBD2Q96M20 576 aa8.88□□□□□ -0.99
SNHG1-216ENST00000541416 PUS1Q9Y606 427 aaKnown RBP eCLIP8.88□□□□□ -0.99
SNHG1-216ENST00000541416 PKD1P98161 4303 aa8.88□□□□□ -0.99
SNHG1-216ENST00000541416 DNAH11Q96DT5 4516 aa8.88□□□□□ -0.99
SNHG1-216ENST00000541416 IFNA10P01566 189 aa8.87□□□□□ -0.99
SNHG1-216ENST00000541416 IFNA21P01568 189 aa8.87□□□□□ -0.99
SNHG1-216ENST00000541416 IFNA17P01571 189 aa8.87□□□□□ -0.99
SNHG1-216ENST00000541416 IGHV3-48P01763 117 aa8.87□□□□□ -0.99
SNHG1-216ENST00000541416 SDC2P34741 201 aa8.87□□□□□ -0.99
SNHG1-216ENST00000541416 SUB1P53999 127 aaKnown RBP eCLIP8.87□□□□□ -0.99
SNHG1-216ENST00000541416 GABARAPL2P60520 117 aa8.87□□□□□ -0.99
SNHG1-216ENST00000541416 HSPE1P61604 102 aaKnown RBP8.87□□□□□ -0.99
SNHG1-216ENST00000541416 MXD1Q05195 221 aa8.87□□□□□ -0.99
SNHG1-216ENST00000541416 LGALS9BQ3B8N2 356 aa8.87□□□□□ -0.99
SNHG1-216ENST00000541416 SLC25A38Q96DW6 304 aa8.87□□□□□ -0.99
SNHG1-216ENST00000541416 X6R8D5 127 aa8.87□□□□□ -0.99
SNHG1-216ENST00000541416 MUC4Q99102 2169 aa8.87□□□□□ -0.99
SNHG1-216ENST00000541416 ABCA13Q86UQ4 5058 aa8.86□□□□□ -0.99
SNHG1-216ENST00000541416 ELOA3CA0A087WX78 387 aaPredicted RBP8.86□□□□□ -0.99
SNHG1-216ENST00000541416 MEIS3P1A6NDR6 274 aa8.86□□□□□ -0.99
SNHG1-216ENST00000541416 DBX1A6NMT0 343 aa8.86□□□□□ -0.99
SNHG1-216ENST00000541416 K7EQG2 157 aa8.86□□□□□ -0.99
SNHG1-216ENST00000541416 M0R2N4 97 aa8.86□□□□□ -0.99
SNHG1-216ENST00000541416 APOHP02749 345 aaPredicted RBP8.86□□□□□ -0.99
SNHG1-216ENST00000541416 ZNF688P0C7X2 276 aa8.86□□□□□ -0.99
SNHG1-216ENST00000541416 RFX2P48378 723 aa8.86□□□□□ -0.99
SNHG1-216ENST00000541416 AP2S1P53680 142 aaPredicted RBP8.86□□□□□ -0.99
SNHG1-216ENST00000541416 ACTL10Q5JWF8 245 aa8.86□□□□□ -0.99
SNHG1-216ENST00000541416 UBE2DNLQ8IWF7 75 aa8.86□□□□□ -0.99
SNHG1-216ENST00000541416 FAM24BQ8N5W8 94 aa8.86□□□□□ -0.99
SNHG1-216ENST00000541416 OR5H6Q8NGV6 325 aa8.86□□□□□ -0.99
SNHG1-216ENST00000541416 S100A16Q96FQ6 103 aaKnown RBP8.86□□□□□ -0.99
SNHG1-216ENST00000541416 ZFAND3Q9H8U3 227 aa8.86□□□□□ -0.99
SNHG1-216ENST00000541416 HELTA6NFD8 242 aa8.85□□□□□ -0.99
SNHG1-216ENST00000541416 RTL8CO15255 209 aa8.85□□□□□ -0.99
SNHG1-216ENST00000541416 TMEM50AO95807 157 aa8.85□□□□□ -0.99
SNHG1-216ENST00000541416 PMP2P02689 132 aa8.85□□□□□ -0.99
SNHG1-216ENST00000541416 GIG44P09565 113 aaPredicted RBP8.85□□□□□ -0.99
SNHG1-216ENST00000541416 C4BPBP20851 252 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms