RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 SOX21Q9Y651 276 aaPredicted RBP9.96□□□□□ -0.82
SMAD3-204ENST00000540846 F8P00451 2351 aa9.95□□□□□ -0.82
SMAD3-204ENST00000540846 SMCO3A2RU48 225 aa9.95□□□□□ -0.82
SMAD3-204ENST00000540846 E7EUB6 86 aa9.95□□□□□ -0.82
SMAD3-204ENST00000540846 SCO1O75880 301 aa9.95□□□□□ -0.82
SMAD3-204ENST00000540846 IGKV1D-33P01593 117 aa9.95□□□□□ -0.82
SMAD3-204ENST00000540846 IGKV1-33P01594 117 aa9.95□□□□□ -0.82
SMAD3-204ENST00000540846 SFTA3P0C7M3 94 aa9.95□□□□□ -0.82
SMAD3-204ENST00000540846 CNTFRP26992 372 aa9.95□□□□□ -0.82
SMAD3-204ENST00000540846 OPRK1P41145 380 aa9.95□□□□□ -0.82
SMAD3-204ENST00000540846 ERHP84090 104 aaKnown RBP9.95□□□□□ -0.82
SMAD3-204ENST00000540846 WT1-ASQ06250 92 aa9.95□□□□□ -0.82
SMAD3-204ENST00000540846 CCDC144NLQ6NUI1 221 aa9.95□□□□□ -0.82
SMAD3-204ENST00000540846 SSX7Q7RTT5 188 aa9.95□□□□□ -0.82
SMAD3-204ENST00000540846 RPP25LQ8N5L8 163 aaKnown RBP9.95□□□□□ -0.82
SMAD3-204ENST00000540846 MGST2Q99735 147 aa9.95□□□□□ -0.82
SMAD3-204ENST00000540846 GGTLC1Q9BX51 225 aa9.95□□□□□ -0.82
SMAD3-204ENST00000540846 SMDT1Q9H4I9 107 aa9.95□□□□□ -0.82
SMAD3-204ENST00000540846 NPVFQ9HCQ7 196 aa9.95□□□□□ -0.82
SMAD3-204ENST00000540846 KCNIP2Q9NS61 270 aa9.95□□□□□ -0.82
SMAD3-204ENST00000540846 METTL1Q9UBP6 276 aaKnown RBP9.95□□□□□ -0.82
SMAD3-204ENST00000540846 MTORP42345 2549 aa9.94□□□□□ -0.82
SMAD3-204ENST00000540846 A0A1B0GV50 99 aa9.94□□□□□ -0.82
SMAD3-204ENST00000540846 F8W036 122 aa9.94□□□□□ -0.82
SMAD3-204ENST00000540846 LY6G6DO95868 133 aa9.94□□□□□ -0.82
SMAD3-204ENST00000540846 FOSL1P15407 271 aa9.94□□□□□ -0.82
SMAD3-204ENST00000540846 COMPP49747 757 aaPredicted RBP9.94□□□□□ -0.82
SMAD3-204ENST00000540846 HNF4GQ14541 408 aa9.94□□□□□ -0.82
SMAD3-204ENST00000540846 C9orf139Q6ZV77 190 aa9.94□□□□□ -0.82
SMAD3-204ENST00000540846 MRPL41Q8IXM3 137 aaKnown RBP9.94□□□□□ -0.82
SMAD3-204ENST00000540846 EIF5A2Q9GZV4 153 aaKnown RBP9.94□□□□□ -0.82
SMAD3-204ENST00000540846 HILPDAQ9Y5L2 63 aa9.94□□□□□ -0.82
SMAD3-204ENST00000540846 ZFHX3Q15911 3703 aa9.93□□□□□ -0.82
SMAD3-204ENST00000540846 A0A0U1RQK1 487 aa9.93□□□□□ -0.82
SMAD3-204ENST00000540846 CTXND1A0A1B0GTU2 59 aa9.93□□□□□ -0.82
SMAD3-204ENST00000540846 IGLC7A0M8Q6 106 aa9.93□□□□□ -0.82
SMAD3-204ENST00000540846 MAP1LC3B2A6NCE7 125 aa9.93□□□□□ -0.82
SMAD3-204ENST00000540846 RBFOX3A6NFN3 312 aa9.93□□□□□ -0.82
SMAD3-204ENST00000540846 CD99P14209 185 aa9.93□□□□□ -0.82
SMAD3-204ENST00000540846 M6PRP20645 277 aa9.93□□□□□ -0.82
SMAD3-204ENST00000540846 RPL27AP46776 148 aaKnown RBP9.93□□□□□ -0.82
SMAD3-204ENST00000540846 SSX2Q16385 188 aa9.93□□□□□ -0.82
SMAD3-204ENST00000540846 FBLN7Q53RD9 439 aa9.93□□□□□ -0.82
SMAD3-204ENST00000540846 ZNF506Q5JVG8 444 aa9.93□□□□□ -0.82
SMAD3-204ENST00000540846 PPP1R27Q86WC6 154 aa9.93□□□□□ -0.82
SMAD3-204ENST00000540846 OR10G4Q8NGN3 311 aa9.93□□□□□ -0.82
SMAD3-204ENST00000540846 OR10G9Q8NGN4 311 aa9.93□□□□□ -0.82
SMAD3-204ENST00000540846 OR10G7Q8NGN6 311 aa9.93□□□□□ -0.82
SMAD3-204ENST00000540846 RNASEH2CQ8TDP1 164 aaKnown RBP9.93□□□□□ -0.82
SMAD3-204ENST00000540846 MALSU1Q96EH3 234 aa9.93□□□□□ -0.82
SMAD3-204ENST00000540846 MAP1LC3BQ9GZQ8 125 aa9.93□□□□□ -0.82
SMAD3-204ENST00000540846 PLXNB1O43157 2135 aa9.93□□□□□ -0.82
SMAD3-204ENST00000540846 ANK3Q12955 4377 aaKnown RBP9.93□□□□□ -0.82
SMAD3-204ENST00000540846 SEC14L6B5MCN3 397 aa9.92□□□□□ -0.82
SMAD3-204ENST00000540846 ACTL6BO94805 426 aa9.92□□□□□ -0.82
SMAD3-204ENST00000540846 MOSP00540 346 aa9.92□□□□□ -0.82
SMAD3-204ENST00000540846 PPT1P50897 306 aa9.92□□□□□ -0.82
SMAD3-204ENST00000540846 LGALS4P56470 323 aa9.92□□□□□ -0.82
SMAD3-204ENST00000540846 BPIFB3P59826 476 aa9.92□□□□□ -0.82
SMAD3-204ENST00000540846 DEFA5Q01523 94 aa9.92□□□□□ -0.82
SMAD3-204ENST00000540846 CD69Q07108 199 aa9.92□□□□□ -0.82
SMAD3-204ENST00000540846 GUCA2BQ16661 112 aa9.92□□□□□ -0.82
SMAD3-204ENST00000540846 ACOT6Q3I5F7 207 aaPredicted RBP9.92□□□□□ -0.82
SMAD3-204ENST00000540846 FAM120AOSQ5T036 256 aa9.92□□□□□ -0.82
SMAD3-204ENST00000540846 TEPPQ6URK8 271 aa9.92□□□□□ -0.82
SMAD3-204ENST00000540846 LCN15Q6UWW0 184 aa9.92□□□□□ -0.82
SMAD3-204ENST00000540846 BCL6BQ8N143 479 aaPredicted RBP9.92□□□□□ -0.82
SMAD3-204ENST00000540846 SVBPQ8N300 66 aa9.92□□□□□ -0.82
SMAD3-204ENST00000540846 ZNF114Q8NC26 417 aa9.92□□□□□ -0.82
SMAD3-204ENST00000540846 NANPQ8TBE9 248 aa9.92□□□□□ -0.82
SMAD3-204ENST00000540846 TMEM160Q9NX00 188 aa9.92□□□□□ -0.82
SMAD3-204ENST00000540846 HIVEP2P31629 2446 aa9.92□□□□□ -0.82
SMAD3-204ENST00000540846 NBR2O15453 112 aa9.92□□□□□ -0.82
SMAD3-204ENST00000540846 NDUFA3O95167 84 aa9.92□□□□□ -0.82
SMAD3-204ENST00000540846 OR13C7P0DN81 318 aa9.92□□□□□ -0.82
SMAD3-204ENST00000540846 GPX4P36969 197 aaPredicted RBP9.92□□□□□ -0.82
SMAD3-204ENST00000540846 SUB1P53999 127 aaKnown RBP eCLIP9.92□□□□□ -0.82
SMAD3-204ENST00000540846 SSBP2P81877 361 aaPredicted RBP9.92□□□□□ -0.82
SMAD3-204ENST00000540846 PMS2P11Q13670 270 aa9.92□□□□□ -0.82
SMAD3-204ENST00000540846 TNXAQ16473 311 aa9.92□□□□□ -0.82
SMAD3-204ENST00000540846 PVRIGQ6DKI7 326 aa9.92□□□□□ -0.82
SMAD3-204ENST00000540846 ATRAIDQ6UW56 229 aa9.92□□□□□ -0.82
SMAD3-204ENST00000540846 IL17RELQ6ZVW7 336 aa9.92□□□□□ -0.82
SMAD3-204ENST00000540846 SLC16A13Q7RTY0 426 aa9.92□□□□□ -0.82
SMAD3-204ENST00000540846 TMEM144Q7Z5S9 345 aa9.92□□□□□ -0.82
SMAD3-204ENST00000540846 NPBQ8NG41 125 aa9.92□□□□□ -0.82
SMAD3-204ENST00000540846 CACNG8Q8WXS5 425 aa9.92□□□□□ -0.82
SMAD3-204ENST00000540846 P2RX4Q99571 388 aa9.92□□□□□ -0.82
SMAD3-204ENST00000540846 RARRES2Q99969 163 aa9.92□□□□□ -0.82
SMAD3-204ENST00000540846 ACTR3CQ9C0K3 210 aaPredicted RBP9.92□□□□□ -0.82
SMAD3-204ENST00000540846 MEGF9Q9H1U4 602 aa9.92□□□□□ -0.82
SMAD3-204ENST00000540846 FBXL15Q9H469 300 aa9.92□□□□□ -0.82
SMAD3-204ENST00000540846 SLC25A22Q9H936 323 aa9.92□□□□□ -0.82
SMAD3-204ENST00000540846 YAE1D1Q9NRH1 226 aa9.92□□□□□ -0.82
SMAD3-204ENST00000540846 PXMP4Q9Y6I8 212 aa9.92□□□□□ -0.82
SMAD3-204ENST00000540846 LOC102723971A0A1B0GUV8 181 aa9.91□□□□□ -0.82
SMAD3-204ENST00000540846 TEX22C9J3V5 150 aa9.91□□□□□ -0.82
SMAD3-204ENST00000540846 YIF1AO95070 293 aa9.91□□□□□ -0.82
SMAD3-204ENST00000540846 BCL2P10415 239 aa9.91□□□□□ -0.82
SMAD3-204ENST00000540846 RAB31Q13636 194 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms