RNA–Protein interactions for RNA: ENST00000540803.1

RAB35-204, Transcript of RAB35, member RAS oncogene family, humanhuman

TSL 2

Gene RAB35, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB35-204ENST00000540803 TMEM61Q8N0U2 210 aa14.41□□□□□ -0.1
RAB35-204ENST00000540803 SLC35G3Q8N808 338 aa14.41□□□□□ -0.1
RAB35-204ENST00000540803 MARC2Q969Z3 335 aa14.41□□□□□ -0.1
RAB35-204ENST00000540803 ZNF414Q96IQ9 312 aa14.41□□□□□ -0.1
RAB35-204ENST00000540803 RCHY1Q96PM5 261 aa14.41□□□□□ -0.1
RAB35-204ENST00000540803 NEURL2Q9BR09 285 aa14.41□□□□□ -0.1
RAB35-204ENST00000540803 TM2D3Q9BRN9 247 aa14.41□□□□□ -0.1
RAB35-204ENST00000540803 SCP2D1Q9UJQ7 156 aa14.41□□□□□ -0.1
RAB35-204ENST00000540803 V9GYH0 126 aa14.41□□□□□ -0.1
RAB35-204ENST00000540803 MT-CO2P00403 227 aa14.4□□□□□ -0.1
RAB35-204ENST00000540803 IFNA17P01571 189 aa14.4□□□□□ -0.1
RAB35-204ENST00000540803 FCGR2BP31994 310 aaPredicted RBP14.4□□□□□ -0.1
RAB35-204ENST00000540803 DHODHQ02127 395 aa14.4□□□□□ -0.1
RAB35-204ENST00000540803 SELENOHQ8IZQ5 122 aaKnown RBP14.4□□□□□ -0.1
RAB35-204ENST00000540803 RNASE11Q8TAA1 199 aaKnown RBP14.4□□□□□ -0.1
RAB35-204ENST00000540803 RBPMSQ93062 196 aaKnown RBP14.4□□□□□ -0.1
RAB35-204ENST00000540803 TRIM63Q969Q1 353 aa14.4□□□□□ -0.1
RAB35-204ENST00000540803 TMEM230Q96A57 120 aa14.4□□□□□ -0.1
RAB35-204ENST00000540803 ZMAT4Q9H898 229 aa14.4□□□□□ -0.1
RAB35-204ENST00000540803 MCUBQ9NWR8 336 aa14.4□□□□□ -0.1
RAB35-204ENST00000540803 MRPL27Q9P0M9 148 aaKnown RBP14.4□□□□□ -0.1
RAB35-204ENST00000540803 NDUFA4O00483 81 aa14.39□□□□□ -0.11
RAB35-204ENST00000540803 CTSGP08311 255 aa14.39□□□□□ -0.11
RAB35-204ENST00000540803 ETV6P41212 452 aa14.39□□□□□ -0.11
RAB35-204ENST00000540803 KLF9Q13886 244 aaPredicted RBP14.39□□□□□ -0.11
RAB35-204ENST00000540803 ZNF79Q15937 498 aa14.39□□□□□ -0.11
RAB35-204ENST00000540803 FAM219AQ8IW50 185 aa14.39□□□□□ -0.11
RAB35-204ENST00000540803 PINX1Q96BK5 328 aaKnown RBP14.39□□□□□ -0.11
RAB35-204ENST00000540803 PDCD10Q9BUL8 212 aa14.39□□□□□ -0.11
RAB35-204ENST00000540803 TUBA4BQ9H853 241 aa14.39□□□□□ -0.11
RAB35-204ENST00000540803 ZNF701M0R085 212 aaPredicted RBP14.38□□□□□ -0.11
RAB35-204ENST00000540803 IGHV3-48P01763 117 aa14.38□□□□□ -0.11
RAB35-204ENST00000540803 MFAP4P55083 255 aa14.38□□□□□ -0.11
RAB35-204ENST00000540803 AARDQ4LEZ3 155 aa14.38□□□□□ -0.11
RAB35-204ENST00000540803 PYDC2Q56P42 97 aa14.38□□□□□ -0.11
RAB35-204ENST00000540803 PVRIGQ6DKI7 326 aa14.38□□□□□ -0.11
RAB35-204ENST00000540803 TXN2Q99757 166 aa14.38□□□□□ -0.11
RAB35-204ENST00000540803 WFDC10AQ9H1F0 79 aa14.38□□□□□ -0.11
RAB35-204ENST00000540803 DAZ1Q9NQZ3 744 aaKnown RBP14.38□□□□□ -0.11
RAB35-204ENST00000540803 GAR1Q9NY12 217 aaKnown RBP14.38□□□□□ -0.11
RAB35-204ENST00000540803 TMEM56-RWDD3S4R434 201 aa14.38□□□□□ -0.11
RAB35-204ENST00000540803 IGHV3OR16-8A0A075B7F1 116 aa14.37□□□□□ -0.11
RAB35-204ENST00000540803 SCAF4O95104 1147 aaKnown RBP14.37□□□□□ -0.11
RAB35-204ENST00000540803 RNASE2P10153 161 aaKnown RBP14.37□□□□□ -0.11
RAB35-204ENST00000540803 S100A5P33763 92 aa14.37□□□□□ -0.11
RAB35-204ENST00000540803 HOXA1P49639 335 aaPredicted RBP14.37□□□□□ -0.11
RAB35-204ENST00000540803 HAGHQ16775 308 aa14.37□□□□□ -0.11
RAB35-204ENST00000540803 TMEM268Q5VZI3 342 aa14.37□□□□□ -0.11
RAB35-204ENST00000540803 CCDC190Q86UF4 302 aa14.37□□□□□ -0.11
RAB35-204ENST00000540803 DEFB125Q8N687 156 aa14.37□□□□□ -0.11
RAB35-204ENST00000540803 GALNT14Q96FL9 552 aa14.37□□□□□ -0.11
RAB35-204ENST00000540803 SCGB3A2Q96PL1 93 aa14.37□□□□□ -0.11
RAB35-204ENST00000540803 NUPL2O15504 423 aaKnown RBP14.36□□□□□ -0.11
RAB35-204ENST00000540803 SNCAP37840 140 aa14.36□□□□□ -0.11
RAB35-204ENST00000540803 TMEM187Q14656 261 aa14.36□□□□□ -0.11
RAB35-204ENST00000540803 LINC00322Q6ZN03 302 aaPredicted RBP14.36□□□□□ -0.11
RAB35-204ENST00000540803 OR52E5Q8NH55 327 aa14.36□□□□□ -0.11
RAB35-204ENST00000540803 GPR146Q96CH1 333 aa14.36□□□□□ -0.11
RAB35-204ENST00000540803 C20orf24Q9BUV8 137 aa14.36□□□□□ -0.11
RAB35-204ENST00000540803 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.36□□□□□ -0.11
RAB35-204ENST00000540803 PRR13Q9NZ81 148 aa14.36□□□□□ -0.11
RAB35-204ENST00000540803 CACNG5Q9UF02 275 aa14.36□□□□□ -0.11
RAB35-204ENST00000540803 TRAV25A0A0B4J276 109 aa14.35□□□□□ -0.11
RAB35-204ENST00000540803 C15orf62A8K5M9 175 aa14.35□□□□□ -0.11
RAB35-204ENST00000540803 OR11H12B2RN74 326 aa14.35□□□□□ -0.11
RAB35-204ENST00000540803 K7EMT4 169 aa14.35□□□□□ -0.11
RAB35-204ENST00000540803 ZNF207O43670 478 aaKnown RBP14.35□□□□□ -0.11
RAB35-204ENST00000540803 FAUP35544 74 aaKnown RBP14.35□□□□□ -0.11
RAB35-204ENST00000540803 SPCS3P61009 180 aa14.35□□□□□ -0.11
RAB35-204ENST00000540803 SUPT4H1P63272 117 aaKnown RBP14.35□□□□□ -0.11
RAB35-204ENST00000540803 RELQ04864 619 aaPredicted RBP14.35□□□□□ -0.11
RAB35-204ENST00000540803 TOMM5Q8N4H5 51 aa14.35□□□□□ -0.11
RAB35-204ENST00000540803 ENY2Q9NPA8 101 aa14.35□□□□□ -0.11
RAB35-204ENST00000540803 KCNIP3Q9Y2W7 256 aa14.35□□□□□ -0.11
RAB35-204ENST00000540803 AKR1C4P17516 323 aa14.34□□□□□ -0.11
RAB35-204ENST00000540803 SUB1P53999 127 aaKnown RBP eCLIP14.34□□□□□ -0.11
RAB35-204ENST00000540803 AP3S2P59780 193 aa14.34□□□□□ -0.11
RAB35-204ENST00000540803 BSXQ3C1V8 233 aa14.34□□□□□ -0.11
RAB35-204ENST00000540803 RBPMS2Q6ZRY4 209 aaKnown RBP14.34□□□□□ -0.11
RAB35-204ENST00000540803 SLC16A13Q7RTY0 426 aa14.34□□□□□ -0.11
RAB35-204ENST00000540803 OR52B4Q8NGK2 314 aa14.34□□□□□ -0.11
RAB35-204ENST00000540803 IL22RA2Q969J5 263 aa14.34□□□□□ -0.11
RAB35-204ENST00000540803 SRD5A3Q9H8P0 318 aa14.34□□□□□ -0.11
RAB35-204ENST00000540803 RBMY1BA6NDE4 496 aaKnown RBP14.33□□□□□ -0.12
RAB35-204ENST00000540803 RBMY1EA6NEQ0 496 aaKnown RBP14.33□□□□□ -0.12
RAB35-204ENST00000540803 CORTO00230 105 aa14.33□□□□□ -0.12
RAB35-204ENST00000540803 GNG7O60262 68 aa14.33□□□□□ -0.12
RAB35-204ENST00000540803 RBMY1DP0C7P1 496 aaKnown RBP14.33□□□□□ -0.12
RAB35-204ENST00000540803 DUSP18Q8NEJ0 188 aa14.33□□□□□ -0.12
RAB35-204ENST00000540803 OR10C1Q96KK4 312 aa14.33□□□□□ -0.12
RAB35-204ENST00000540803 SPATA25Q9BR10 227 aa14.33□□□□□ -0.12
RAB35-204ENST00000540803 NPBWR1P48145 328 aa14.32□□□□□ -0.12
RAB35-204ENST00000540803 ANKRD55Q3KP44 614 aa14.32□□□□□ -0.12
RAB35-204ENST00000540803 SRRQ9GZT4 340 aa14.32□□□□□ -0.12
RAB35-204ENST00000540803 FNDC4Q9H6D8 234 aaPredicted RBP14.32□□□□□ -0.12
RAB35-204ENST00000540803 MRPL36Q9P0J6 103 aaKnown RBP14.32□□□□□ -0.12
RAB35-204ENST00000540803 NBEAL2Q6ZNJ1 2754 aa14.32□□□□□ -0.12
RAB35-204ENST00000540803 TSPAN4O14817 238 aa14.31□□□□□ -0.12
RAB35-204ENST00000540803 YIF1AO95070 293 aa14.31□□□□□ -0.12
RAB35-204ENST00000540803 SPANXN2Q5MJ10 180 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms