RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 TRBV7-9A0A0J9YWB2 115 aa7.84□□□□□ -1.16
CTNNA1-243ENST00000540387 TLX3O43711 291 aaPredicted RBP7.84□□□□□ -1.16
CTNNA1-243ENST00000540387 AESQ08117 197 aa7.84□□□□□ -1.16
CTNNA1-243ENST00000540387 Q8N7P7 452 aa7.84□□□□□ -1.16
CTNNA1-243ENST00000540387 FAM110AQ9BQ89 295 aa7.84□□□□□ -1.16
CTNNA1-243ENST00000540387 SPANXB1Q9NS25 103 aaPredicted RBP7.84□□□□□ -1.16
CTNNA1-243ENST00000540387 SMIM27A0A1W2PRY6 76 aa7.83□□□□□ -1.16
CTNNA1-243ENST00000540387 EDDM3BP56851 147 aa7.83□□□□□ -1.16
CTNNA1-243ENST00000540387 CARD17Q5XLA6 110 aa7.83□□□□□ -1.16
CTNNA1-243ENST00000540387 Q6ZS49 121 aa7.83□□□□□ -1.16
CTNNA1-243ENST00000540387 OSTCQ9NRP0 149 aa7.83□□□□□ -1.16
CTNNA1-243ENST00000540387 URB1O60287 2271 aaKnown RBP7.83□□□□□ -1.16
CTNNA1-243ENST00000540387 IZUMO1RA6ND01 250 aa7.83□□□□□ -1.16
CTNNA1-243ENST00000540387 KLK10O43240 276 aa7.83□□□□□ -1.16
CTNNA1-243ENST00000540387 SSR4P51571 173 aa7.83□□□□□ -1.16
CTNNA1-243ENST00000540387 RBM11P57052 281 aaKnown RBP7.83□□□□□ -1.16
CTNNA1-243ENST00000540387 DAZAP2Q15038 168 aaPredicted RBP7.83□□□□□ -1.16
CTNNA1-243ENST00000540387 ZNF585BQ52M93 769 aa7.83□□□□□ -1.16
CTNNA1-243ENST00000540387 CENPWQ5EE01 88 aa7.83□□□□□ -1.16
CTNNA1-243ENST00000540387 Q6ZSR3 168 aa7.83□□□□□ -1.16
CTNNA1-243ENST00000540387 C11orf52Q96A22 123 aa7.83□□□□□ -1.16
CTNNA1-243ENST00000540387 RNF183Q96D59 192 aa7.83□□□□□ -1.16
CTNNA1-243ENST00000540387 SPAG8Q99932 426 aaPredicted RBP7.83□□□□□ -1.16
CTNNA1-243ENST00000540387 MSRB2Q9Y3D2 182 aa7.83□□□□□ -1.16
CTNNA1-243ENST00000540387 VWC2LB2RUY7 222 aa7.82□□□□□ -1.16
CTNNA1-243ENST00000540387 NEURL1O76050 574 aa7.82□□□□□ -1.16
CTNNA1-243ENST00000540387 LEPROTL1O95214 131 aa7.82□□□□□ -1.16
CTNNA1-243ENST00000540387 STAG3L2P0CL84 134 aa7.82□□□□□ -1.16
CTNNA1-243ENST00000540387 CYB561P49447 251 aa7.82□□□□□ -1.16
CTNNA1-243ENST00000540387 GNG4P50150 75 aa7.82□□□□□ -1.16
CTNNA1-243ENST00000540387 ATP5G2Q06055 141 aa7.82□□□□□ -1.16
CTNNA1-243ENST00000540387 VWC2Q2TAL6 325 aa7.82□□□□□ -1.16
CTNNA1-243ENST00000540387 GDF5OSQ5U4N7 250 aa7.82□□□□□ -1.16
CTNNA1-243ENST00000540387 ZNF418Q8TF45 676 aaPredicted RBP7.82□□□□□ -1.16
CTNNA1-243ENST00000540387 BORCS8Q96FH0 119 aa7.82□□□□□ -1.16
CTNNA1-243ENST00000540387 C5orf30Q96GV9 206 aa7.82□□□□□ -1.16
CTNNA1-243ENST00000540387 MS4A5Q9H3V2 200 aa7.82□□□□□ -1.16
CTNNA1-243ENST00000540387 DEPPQ9NTK1 212 aa7.82□□□□□ -1.16
CTNNA1-243ENST00000540387 RABAC1Q9UI14 185 aa7.82□□□□□ -1.16
CTNNA1-243ENST00000540387 OR2W1Q9Y3N9 320 aa7.82□□□□□ -1.16
CTNNA1-243ENST00000540387 DOCK10Q96BY6 2186 aa7.82□□□□□ -1.16
CTNNA1-243ENST00000540387 DIDO1Q9BTC0 2240 aaKnown RBP7.82□□□□□ -1.16
CTNNA1-243ENST00000540387 IGHV1-24A0A0C4DH33 117 aa7.82□□□□□ -1.16
CTNNA1-243ENST00000540387 A0A1W2PQD3 144 aa7.82□□□□□ -1.16
CTNNA1-243ENST00000540387 FAM90A26D6RGX4 464 aa7.82□□□□□ -1.16
CTNNA1-243ENST00000540387 CXorf1O96002 111 aa7.82□□□□□ -1.16
CTNNA1-243ENST00000540387 CA1P00915 261 aaPredicted RBP7.82□□□□□ -1.16
CTNNA1-243ENST00000540387 PRSS12P56730 875 aa7.82□□□□□ -1.16
CTNNA1-243ENST00000540387 SLC25A47Q6Q0C1 308 aa7.82□□□□□ -1.16
CTNNA1-243ENST00000540387 ACP7Q6ZNF0 438 aa7.82□□□□□ -1.16
CTNNA1-243ENST00000540387 PQLC2Q6ZP29 291 aa7.82□□□□□ -1.16
CTNNA1-243ENST00000540387 SSX8Q7RTT4 187 aa7.82□□□□□ -1.16
CTNNA1-243ENST00000540387 KLRF1Q9NZS2 232 aa7.82□□□□□ -1.16
CTNNA1-243ENST00000540387 CHCHD2Q9Y6H1 151 aaPredicted RBP7.82□□□□□ -1.16
CTNNA1-243ENST00000540387 MGAQ8IWI9 3026 aa7.81□□□□□ -1.16
CTNNA1-243ENST00000540387 LIPFP07098 398 aa7.81□□□□□ -1.16
CTNNA1-243ENST00000540387 RSPO1Q2MKA7 263 aaPredicted RBP7.81□□□□□ -1.16
CTNNA1-243ENST00000540387 CEACAM16Q2WEN9 425 aa7.81□□□□□ -1.16
CTNNA1-243ENST00000540387 SAMD5Q5TGI4 173 aa7.81□□□□□ -1.16
CTNNA1-243ENST00000540387 LINC00696Q6ZRV3 163 aa7.81□□□□□ -1.16
CTNNA1-243ENST00000540387 WIPF2Q8TF74 440 aaPredicted RBP7.81□□□□□ -1.16
CTNNA1-243ENST00000540387 METTL7AQ9H8H3 244 aa7.81□□□□□ -1.16
CTNNA1-243ENST00000540387 HIF1ANQ9NWT6 349 aa7.81□□□□□ -1.16
CTNNA1-243ENST00000540387 TRAPPC2LQ9UL33 140 aa7.81□□□□□ -1.16
CTNNA1-243ENST00000540387 KCNS2Q9ULS6 477 aa7.81□□□□□ -1.16
CTNNA1-243ENST00000540387 H0Y8G0 127 aa7.81□□□□□ -1.16
CTNNA1-243ENST00000540387 CCL3P10147 92 aa7.81□□□□□ -1.16
CTNNA1-243ENST00000540387 FGF6P10767 208 aa7.81□□□□□ -1.16
CTNNA1-243ENST00000540387 WFDC2Q14508 124 aa7.81□□□□□ -1.16
CTNNA1-243ENST00000540387 PCSK4Q6UW60 755 aa7.81□□□□□ -1.16
CTNNA1-243ENST00000540387 LHFPL2Q6ZUX7 228 aa7.81□□□□□ -1.16
CTNNA1-243ENST00000540387 RNF138Q8WVD3 245 aa7.81□□□□□ -1.16
CTNNA1-243ENST00000540387 H1FXQ92522 213 aaKnown RBP7.81□□□□□ -1.16
CTNNA1-243ENST00000540387 ABHD17AQ96GS6 310 aa7.81□□□□□ -1.16
CTNNA1-243ENST00000540387 IGF2RP11717 2491 aa7.81□□□□□ -1.16
CTNNA1-243ENST00000540387 CLEC3BP05452 202 aa7.8□□□□□ -1.16
CTNNA1-243ENST00000540387 CCL11P51671 97 aa7.8□□□□□ -1.16
CTNNA1-243ENST00000540387 DEFB109BQ30KR1 87 aa7.8□□□□□ -1.16
CTNNA1-243ENST00000540387 ABHD17BQ5VST6 288 aa7.8□□□□□ -1.16
CTNNA1-243ENST00000540387 SPINK14Q6IE38 97 aa7.8□□□□□ -1.16
CTNNA1-243ENST00000540387 OR10D3Q8NH80 312 aa7.8□□□□□ -1.16
CTNNA1-243ENST00000540387 LRRC29Q8WV35 223 aa7.8□□□□□ -1.16
CTNNA1-243ENST00000540387 PROK2Q9HC23 129 aa7.8□□□□□ -1.16
CTNNA1-243ENST00000540387 ERG28Q9UKR5 140 aa7.8□□□□□ -1.16
CTNNA1-243ENST00000540387 HELTA6NFD8 242 aa7.8□□□□□ -1.16
CTNNA1-243ENST00000540387 LRRC30A6NM36 301 aa7.8□□□□□ -1.16
CTNNA1-243ENST00000540387 GCHFRP30047 84 aa7.8□□□□□ -1.16
CTNNA1-243ENST00000540387 FCGR2BP31994 310 aaPredicted RBP7.8□□□□□ -1.16
CTNNA1-243ENST00000540387 MFAP2P55001 183 aa7.8□□□□□ -1.16
CTNNA1-243ENST00000540387 IBA57Q5T440 356 aaKnown RBP7.8□□□□□ -1.16
CTNNA1-243ENST00000540387 RASL11AQ6T310 242 aa7.8□□□□□ -1.16
CTNNA1-243ENST00000540387 GALMQ96C23 342 aa7.8□□□□□ -1.16
CTNNA1-243ENST00000540387 GPR82Q96P67 336 aa7.8□□□□□ -1.16
CTNNA1-243ENST00000540387 VGLL1Q99990 258 aa7.8□□□□□ -1.16
CTNNA1-243ENST00000540387 MAP1LC3CQ9BXW4 147 aa7.8□□□□□ -1.16
CTNNA1-243ENST00000540387 SH2D2AQ9NP31 389 aa7.8□□□□□ -1.16
CTNNA1-243ENST00000540387 MTCH1Q9NZJ7 389 aa7.8□□□□□ -1.16
CTNNA1-243ENST00000540387 KIR2DS1A0A191URI9 304 aa7.79□□□□□ -1.16
CTNNA1-243ENST00000540387 KBTBD11-OT1A0A1B0GTJ5 212 aa7.79□□□□□ -1.16
CTNNA1-243ENST00000540387 TNFRSF13BO14836 293 aaPredicted RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms