RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 STPG3Q8N7X2 389 aa17.91■□□□□ 0.46
HOMER3-204ENST00000539827 SRSF12Q8WXF0 261 aaKnown RBP17.91■□□□□ 0.46
HOMER3-204ENST00000539827 AJUBAQ96IF1 538 aa17.91■□□□□ 0.46
HOMER3-204ENST00000539827 FNDC4Q9H6D8 234 aaPredicted RBP17.91■□□□□ 0.46
HOMER3-204ENST00000539827 IGHV3-48P01763 117 aa17.9■□□□□ 0.46
HOMER3-204ENST00000539827 SRP19P09132 144 aaKnown RBP17.9■□□□□ 0.46
HOMER3-204ENST00000539827 PAX8Q06710 450 aa17.9■□□□□ 0.46
HOMER3-204ENST00000539827 MRPL41Q8IXM3 137 aaKnown RBP17.9■□□□□ 0.46
HOMER3-204ENST00000539827 RNASEH2CQ8TDP1 164 aaKnown RBP17.9■□□□□ 0.46
HOMER3-204ENST00000539827 ACY3Q96HD9 319 aa17.9■□□□□ 0.46
HOMER3-204ENST00000539827 SLC35E1Q96K37 410 aa17.9■□□□□ 0.46
HOMER3-204ENST00000539827 IGKV1OR2-108A0A075B7D4 117 aa17.9■□□□□ 0.46
HOMER3-204ENST00000539827 SOX15O60248 233 aa17.9■□□□□ 0.46
HOMER3-204ENST00000539827 NDUFA3O95167 84 aa17.9■□□□□ 0.46
HOMER3-204ENST00000539827 CNIH1O95406 144 aa17.9■□□□□ 0.46
HOMER3-204ENST00000539827 OR10J1P30954 320 aa17.9■□□□□ 0.46
HOMER3-204ENST00000539827 SAA4P35542 130 aa17.9■□□□□ 0.46
HOMER3-204ENST00000539827 NPBWR1P48145 328 aa17.9■□□□□ 0.46
HOMER3-204ENST00000539827 MFAP2P55001 183 aa17.9■□□□□ 0.46
HOMER3-204ENST00000539827 KCNIP2Q9NS61 270 aa17.9■□□□□ 0.46
HOMER3-204ENST00000539827 UBR5O95071 2799 aaPredicted RBP17.89■□□□□ 0.45
HOMER3-204ENST00000539827 NAV3Q8IVL0 2385 aa17.89■□□□□ 0.45
HOMER3-204ENST00000539827 RPL29P47914 159 aaKnown RBP17.89■□□□□ 0.45
HOMER3-204ENST00000539827 CEBPGP53567 150 aa17.89■□□□□ 0.45
HOMER3-204ENST00000539827 KHDC3LQ587J8 217 aa17.89■□□□□ 0.45
HOMER3-204ENST00000539827 CACNG8Q8WXS5 425 aa17.89■□□□□ 0.45
HOMER3-204ENST00000539827 MALSU1Q96EH3 234 aa17.89■□□□□ 0.45
HOMER3-204ENST00000539827 MISP3Q96FF7 219 aa17.89■□□□□ 0.45
HOMER3-204ENST00000539827 SMDT1Q9H4I9 107 aa17.89■□□□□ 0.45
HOMER3-204ENST00000539827 SLC45A2Q9UMX9 530 aa17.89■□□□□ 0.45
HOMER3-204ENST00000539827 UTP20O75691 2785 aaKnown RBP17.88■□□□□ 0.45
HOMER3-204ENST00000539827 IGHV3OR16-10A0A075B7F0 116 aa17.88■□□□□ 0.45
HOMER3-204ENST00000539827 CENPVL3A0A0U1RRI6 287 aa17.88■□□□□ 0.45
HOMER3-204ENST00000539827 A0A1W2PPV4 95 aa17.88■□□□□ 0.45
HOMER3-204ENST00000539827 SEC14L6B5MCN3 397 aa17.88■□□□□ 0.45
HOMER3-204ENST00000539827 BCL2P10415 239 aa17.88■□□□□ 0.45
HOMER3-204ENST00000539827 FAM120AOSQ5T036 256 aa17.88■□□□□ 0.45
HOMER3-204ENST00000539827 IQCF2Q8IXL9 164 aa17.88■□□□□ 0.45
HOMER3-204ENST00000539827 ABHD5Q8WTS1 349 aa17.88■□□□□ 0.45
HOMER3-204ENST00000539827 ABCA2Q9BZC7 2435 aa17.88■□□□□ 0.45
HOMER3-204ENST00000539827 NPFFO15130 113 aa17.88■□□□□ 0.45
HOMER3-204ENST00000539827 LINC00869P0C866 280 aa17.88■□□□□ 0.45
HOMER3-204ENST00000539827 GATA2P23769 480 aaPredicted RBP17.88■□□□□ 0.45
HOMER3-204ENST00000539827 NCBP2LA6PVI3 153 aaKnown RBP17.87■□□□□ 0.45
HOMER3-204ENST00000539827 HSPB1P04792 205 aaKnown RBP17.87■□□□□ 0.45
HOMER3-204ENST00000539827 PAX1P15863 534 aa17.87■□□□□ 0.45
HOMER3-204ENST00000539827 TMEM11P17152 192 aa17.87■□□□□ 0.45
HOMER3-204ENST00000539827 PRR20EP86478 221 aa17.87■□□□□ 0.45
HOMER3-204ENST00000539827 PRR20CP86479 221 aa17.87■□□□□ 0.45
HOMER3-204ENST00000539827 PRR20DP86480 221 aa17.87■□□□□ 0.45
HOMER3-204ENST00000539827 PRR20BP86481 221 aa17.87■□□□□ 0.45
HOMER3-204ENST00000539827 PRR20AP86496 221 aa17.87■□□□□ 0.45
HOMER3-204ENST00000539827 C5orf64Q2M2E5 130 aa17.87■□□□□ 0.45
HOMER3-204ENST00000539827 PIP4P2Q8N4L2 257 aa17.87■□□□□ 0.45
HOMER3-204ENST00000539827 Q8N6K4 173 aa17.87■□□□□ 0.45
HOMER3-204ENST00000539827 MRPL36Q9P0J6 103 aaKnown RBP17.87■□□□□ 0.45
HOMER3-204ENST00000539827 SPG11Q96JI7 2443 aa17.86■□□□□ 0.45
HOMER3-204ENST00000539827 KRTAP10-9P60411 292 aa17.86■□□□□ 0.45
HOMER3-204ENST00000539827 EBI3Q14213 229 aa17.86■□□□□ 0.45
HOMER3-204ENST00000539827 ZNF114Q8NC26 417 aa17.86■□□□□ 0.45
HOMER3-204ENST00000539827 GATAD1Q8WUU5 269 aa17.86■□□□□ 0.45
HOMER3-204ENST00000539827 IFNA1P01562 189 aa17.86■□□□□ 0.45
HOMER3-204ENST00000539827 DSCR9P59020 149 aa17.86■□□□□ 0.45
HOMER3-204ENST00000539827 FXYD3Q14802 87 aa17.86■□□□□ 0.45
HOMER3-204ENST00000539827 CLEC12BQ2HXU8 276 aa17.86■□□□□ 0.45
HOMER3-204ENST00000539827 SOHLH1Q5JUK2 328 aa17.86■□□□□ 0.45
HOMER3-204ENST00000539827 RUSC1-AS1Q66K80 236 aa17.86■□□□□ 0.45
HOMER3-204ENST00000539827 NPIPB3Q92617 1050 aa17.86■□□□□ 0.45
HOMER3-204ENST00000539827 IGHV3-21A0A0B4J1V1 117 aa17.85■□□□□ 0.45
HOMER3-204ENST00000539827 AKIRIN2Q53H80 203 aa17.85■□□□□ 0.45
HOMER3-204ENST00000539827 SPATA31B1PQ5VZV4 182 aa17.85■□□□□ 0.45
HOMER3-204ENST00000539827 PVRIGQ6DKI7 326 aa17.85■□□□□ 0.45
HOMER3-204ENST00000539827 CYB561D1Q8N8Q1 229 aa17.85■□□□□ 0.45
HOMER3-204ENST00000539827 FAM103A1Q9BTL3 118 aaKnown RBP17.85■□□□□ 0.45
HOMER3-204ENST00000539827 OR1P1Q8NH06 330 aa17.84■□□□□ 0.45
HOMER3-204ENST00000539827 SLC25A33Q9BSK2 321 aa17.84■□□□□ 0.45
HOMER3-204ENST00000539827 F11RQ9Y624 299 aaKnown RBP17.84■□□□□ 0.45
HOMER3-204ENST00000539827 RBMS3Q6XE24 437 aaKnown RBP17.84■□□□□ 0.45
HOMER3-204ENST00000539827 VAX2Q9UIW0 290 aa17.84■□□□□ 0.45
HOMER3-204ENST00000539827 CYP2G1PQ6ZSU1 146 aa17.83■□□□□ 0.44
HOMER3-204ENST00000539827 SLC35E3Q7Z769 313 aa17.83■□□□□ 0.44
HOMER3-204ENST00000539827 DMRT1Q9Y5R6 373 aa17.83■□□□□ 0.44
HOMER3-204ENST00000539827 FAM106CPP0CH98 169 aa17.82■□□□□ 0.44
HOMER3-204ENST00000539827 RND2P52198 227 aa17.82■□□□□ 0.44
HOMER3-204ENST00000539827 PMS2P11Q13670 270 aa17.82■□□□□ 0.44
HOMER3-204ENST00000539827 SEPSECSQ9HD40 501 aaKnown RBP17.82■□□□□ 0.44
HOMER3-204ENST00000539827 BRS3P32247 399 aa17.82■□□□□ 0.44
HOMER3-204ENST00000539827 FLI1Q01543 452 aaPredicted RBP17.82■□□□□ 0.44
HOMER3-204ENST00000539827 SMUG1Q53HV7 270 aa17.82■□□□□ 0.44
HOMER3-204ENST00000539827 C20orf24Q9BUV8 137 aa17.82■□□□□ 0.44
HOMER3-204ENST00000539827 WNT10AQ9GZT5 417 aa17.82■□□□□ 0.44
HOMER3-204ENST00000539827 TENM4Q6N022 2769 aa17.82■□□□□ 0.44
HOMER3-204ENST00000539827 TRAV40A0A0B4J280 105 aa17.81■□□□□ 0.44
HOMER3-204ENST00000539827 IGHV1-69DA0A0B4J2H0 117 aa17.81■□□□□ 0.44
HOMER3-204ENST00000539827 IGHV1-69P01742 117 aa17.81■□□□□ 0.44
HOMER3-204ENST00000539827 CRYGCP07315 174 aa17.81■□□□□ 0.44
HOMER3-204ENST00000539827 MSMBP08118 114 aa17.81■□□□□ 0.44
HOMER3-204ENST00000539827 RHOBP62745 196 aa17.81■□□□□ 0.44
HOMER3-204ENST00000539827 ETFRF1Q6IPR1 90 aa17.81■□□□□ 0.44
HOMER3-204ENST00000539827 TMEM88Q6PEY1 159 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms