RNA–Protein interactions for RNA: ENST00000538933.1

CLSTN3-208, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-208ENST00000538933 DUX3Q96PT4 197 aa9.68□□□□□ -0.86
CLSTN3-208ENST00000538933 CIB3Q96Q77 187 aaPredicted RBP9.68□□□□□ -0.86
CLSTN3-208ENST00000538933 RBKSQ9H477 322 aa9.68□□□□□ -0.86
CLSTN3-208ENST00000538933 HSPB7Q9UBY9 170 aa9.68□□□□□ -0.86
CLSTN3-208ENST00000538933 PAIP2BQ9ULR5 123 aaKnown RBP9.68□□□□□ -0.86
CLSTN3-208ENST00000538933 RCL1Q9Y2P8 373 aaKnown RBP9.68□□□□□ -0.86
CLSTN3-208ENST00000538933 SMAD5-AS1Q9Y6J3 95 aa9.68□□□□□ -0.86
CLSTN3-208ENST00000538933 MSGN1A6NI15 193 aa9.67□□□□□ -0.86
CLSTN3-208ENST00000538933 K7EPK0 472 aa9.67□□□□□ -0.86
CLSTN3-208ENST00000538933 AP4M1O00189 453 aa9.67□□□□□ -0.86
CLSTN3-208ENST00000538933 LY86O95711 162 aa9.67□□□□□ -0.86
CLSTN3-208ENST00000538933 IGHG2P01859 326 aa9.67□□□□□ -0.86
CLSTN3-208ENST00000538933 MBPP02686 304 aaPredicted RBP9.67□□□□□ -0.86
CLSTN3-208ENST00000538933 PSMB6P28072 239 aa9.67□□□□□ -0.86
CLSTN3-208ENST00000538933 SNCAP37840 140 aa9.67□□□□□ -0.86
CLSTN3-208ENST00000538933 RPP30P78346 268 aaKnown RBP9.67□□□□□ -0.86
CLSTN3-208ENST00000538933 ID3Q02535 119 aa9.67□□□□□ -0.86
CLSTN3-208ENST00000538933 HSD17B13Q7Z5P4 300 aaPredicted RBP9.67□□□□□ -0.86
CLSTN3-208ENST00000538933 OR2T35Q8NGX2 323 aa9.67□□□□□ -0.86
CLSTN3-208ENST00000538933 CHAC2Q8WUX2 184 aa9.67□□□□□ -0.86
CLSTN3-208ENST00000538933 RAB40CQ96S21 281 aa9.67□□□□□ -0.86
CLSTN3-208ENST00000538933 RANGRFQ9HD47 186 aaPredicted RBP9.67□□□□□ -0.86
CLSTN3-208ENST00000538933 NDUFA4L2Q9NRX3 87 aa9.67□□□□□ -0.86
CLSTN3-208ENST00000538933 ZNF256Q9Y2P7 627 aaPredicted RBP9.67□□□□□ -0.86
CLSTN3-208ENST00000538933 PSMB11A5LHX3 300 aa9.66□□□□□ -0.86
CLSTN3-208ENST00000538933 CYB5BO43169 146 aa9.66□□□□□ -0.86
CLSTN3-208ENST00000538933 MPC2O95563 127 aa9.66□□□□□ -0.86
CLSTN3-208ENST00000538933 IFNA10P01566 189 aa9.66□□□□□ -0.86
CLSTN3-208ENST00000538933 OR13C7P0DN81 318 aa9.66□□□□□ -0.86
CLSTN3-208ENST00000538933 DEFA4P12838 97 aa9.66□□□□□ -0.86
CLSTN3-208ENST00000538933 NUP62P37198 522 aaPredicted RBP9.66□□□□□ -0.86
CLSTN3-208ENST00000538933 SUB1P53999 127 aaKnown RBP eCLIP9.66□□□□□ -0.86
CLSTN3-208ENST00000538933 MRGPRG-AS1Q2M3A8 158 aa9.66□□□□□ -0.86
CLSTN3-208ENST00000538933 C9orf66Q5T8R8 295 aa9.66□□□□□ -0.86
CLSTN3-208ENST00000538933 LFNGQ8NES3 379 aa9.66□□□□□ -0.86
CLSTN3-208ENST00000538933 OR10W1Q8NGF6 305 aa9.66□□□□□ -0.86
CLSTN3-208ENST00000538933 TMEM68Q96MH6 324 aa9.66□□□□□ -0.86
CLSTN3-208ENST00000538933 SRSF8Q9BRL6 282 aaKnown RBP9.66□□□□□ -0.86
CLSTN3-208ENST00000538933 GON7Q9BXV9 100 aa9.66□□□□□ -0.86
CLSTN3-208ENST00000538933 ZC4H2Q9NQZ6 224 aa9.66□□□□□ -0.86
CLSTN3-208ENST00000538933 PSENENQ9NZ42 101 aa9.66□□□□□ -0.86
CLSTN3-208ENST00000538933 WSB1Q9Y6I7 421 aa9.66□□□□□ -0.86
CLSTN3-208ENST00000538933 TRAV41A0A0B4J266 112 aa9.65□□□□□ -0.86
CLSTN3-208ENST00000538933 CCL24O00175 119 aa9.65□□□□□ -0.86
CLSTN3-208ENST00000538933 REG1AP05451 166 aa9.65□□□□□ -0.86
CLSTN3-208ENST00000538933 CAV2P51636 162 aa9.65□□□□□ -0.86
CLSTN3-208ENST00000538933 RAB11AP62491 216 aa9.65□□□□□ -0.86
CLSTN3-208ENST00000538933 SLC35B1P78383 322 aa9.65□□□□□ -0.86
CLSTN3-208ENST00000538933 NDPQ00604 133 aa9.65□□□□□ -0.86
CLSTN3-208ENST00000538933 AARDQ4LEZ3 155 aa9.65□□□□□ -0.86
CLSTN3-208ENST00000538933 NOXA1Q86UR1 476 aa9.65□□□□□ -0.86
CLSTN3-208ENST00000538933 KLHL30-AS1Q8NEE0 82 aa9.65□□□□□ -0.86
CLSTN3-208ENST00000538933 DCUN1D4Q92564 292 aa9.65□□□□□ -0.86
CLSTN3-208ENST00000538933 WDR89Q96FK6 387 aaPredicted RBP9.65□□□□□ -0.86
CLSTN3-208ENST00000538933 ZNF355PQ9NSJ1 428 aa9.65□□□□□ -0.86
CLSTN3-208ENST00000538933 LINC00527Q9UJ94 153 aa9.65□□□□□ -0.86
CLSTN3-208ENST00000538933 KMT2AQ03164 3969 aa9.65□□□□□ -0.87
CLSTN3-208ENST00000538933 FXYD6-FXYD2A0A087WZ82 144 aa9.64□□□□□ -0.87
CLSTN3-208ENST00000538933 RBMY1BA6NDE4 496 aaKnown RBP9.64□□□□□ -0.87
CLSTN3-208ENST00000538933 RBMY1EA6NEQ0 496 aaKnown RBP9.64□□□□□ -0.87
CLSTN3-208ENST00000538933 LINC01548A6NM66 108 aa9.64□□□□□ -0.87
CLSTN3-208ENST00000538933 NUDT19A8MXV4 375 aa9.64□□□□□ -0.87
CLSTN3-208ENST00000538933 E5RGE8 158 aa9.64□□□□□ -0.87
CLSTN3-208ENST00000538933 E7EUB6 86 aa9.64□□□□□ -0.87
CLSTN3-208ENST00000538933 H3BP45 60 aa9.64□□□□□ -0.87
CLSTN3-208ENST00000538933 DEDDO75618 318 aa9.64□□□□□ -0.87
CLSTN3-208ENST00000538933 OR8U8P0C7N1 319 aa9.64□□□□□ -0.87
CLSTN3-208ENST00000538933 RBMY1DP0C7P1 496 aaKnown RBP9.64□□□□□ -0.87
CLSTN3-208ENST00000538933 FRMD6-AS1P0C7T7 363 aa9.64□□□□□ -0.87
CLSTN3-208ENST00000538933 HTR2BP41595 481 aa9.64□□□□□ -0.87
CLSTN3-208ENST00000538933 SSBP2P81877 361 aaPredicted RBP9.64□□□□□ -0.87
CLSTN3-208ENST00000538933 SPANXN5Q5MJ07 72 aa9.64□□□□□ -0.87
CLSTN3-208ENST00000538933 OR2C3Q8N628 320 aa9.64□□□□□ -0.87
CLSTN3-208ENST00000538933 SLC24A4Q8NFF2 622 aa9.64□□□□□ -0.87
CLSTN3-208ENST00000538933 OR5T1Q8NG75 326 aa9.64□□□□□ -0.87
CLSTN3-208ENST00000538933 TM2D3Q9BRN9 247 aa9.64□□□□□ -0.87
CLSTN3-208ENST00000538933 MBD2Q9UBB5 411 aa9.64□□□□□ -0.87
CLSTN3-208ENST00000538933 STRAPQ9Y3F4 350 aaKnown RBP9.64□□□□□ -0.87
CLSTN3-208ENST00000538933 U3KQ87 197 aa9.64□□□□□ -0.87
CLSTN3-208ENST00000538933 IGLC7A0M8Q6 106 aa9.63□□□□□ -0.87
CLSTN3-208ENST00000538933 SEC14L6B5MCN3 397 aa9.63□□□□□ -0.87
CLSTN3-208ENST00000538933 TEX22C9J3V5 150 aa9.63□□□□□ -0.87
CLSTN3-208ENST00000538933 G3V318 75 aa9.63□□□□□ -0.87
CLSTN3-208ENST00000538933 SMLR1H3BR10 107 aa9.63□□□□□ -0.87
CLSTN3-208ENST00000538933 IFNA4P05014 189 aa9.63□□□□□ -0.87
CLSTN3-208ENST00000538933 IGF1P05019 195 aa9.63□□□□□ -0.87
CLSTN3-208ENST00000538933 AREGP15514 252 aa9.63□□□□□ -0.87
CLSTN3-208ENST00000538933 NPY1RP25929 384 aa9.63□□□□□ -0.87
CLSTN3-208ENST00000538933 IL15RAQ13261 267 aa9.63□□□□□ -0.87
CLSTN3-208ENST00000538933 AKIRIN2Q53H80 203 aa9.63□□□□□ -0.87
CLSTN3-208ENST00000538933 SLC25A24Q6NUK1 477 aa9.63□□□□□ -0.87
CLSTN3-208ENST00000538933 PRSS54Q6PEW0 395 aa9.63□□□□□ -0.87
CLSTN3-208ENST00000538933 STPG2Q8N412 459 aa9.63□□□□□ -0.87
CLSTN3-208ENST00000538933 OR1L6Q8NGR2 347 aa9.63□□□□□ -0.87
CLSTN3-208ENST00000538933 ST6GAL2Q96JF0 529 aa9.63□□□□□ -0.87
CLSTN3-208ENST00000538933 SMIM8Q96KF7 97 aa9.63□□□□□ -0.87
CLSTN3-208ENST00000538933 NOL4LQ96MY1 436 aaPredicted RBP9.63□□□□□ -0.87
CLSTN3-208ENST00000538933 SLC25A31Q9H0C2 315 aa9.63□□□□□ -0.87
CLSTN3-208ENST00000538933 ZMAT4Q9H898 229 aa9.63□□□□□ -0.87
CLSTN3-208ENST00000538933 FBXO7Q9Y3I1 522 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms