RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 C1QTNF9P0C862 333 aa11.3□□□□□ -0.6
LIMK1-208ENST00000538333 VMA21Q3ZAQ7 101 aa11.3□□□□□ -0.6
LIMK1-208ENST00000538333 TCEAL7Q9BRU2 100 aa11.3□□□□□ -0.6
LIMK1-208ENST00000538333 IGHV3-72A0A0B4J1Y9 119 aa11.29□□□□□ -0.6
LIMK1-208ENST00000538333 PCP4L1A6NKN8 68 aa11.29□□□□□ -0.6
LIMK1-208ENST00000538333 ACTL6BO94805 426 aa11.29□□□□□ -0.6
LIMK1-208ENST00000538333 OR5G3P0C626 314 aa11.29□□□□□ -0.6
LIMK1-208ENST00000538333 TRGC1P0CF51 173 aa11.29□□□□□ -0.6
LIMK1-208ENST00000538333 CD99P14209 185 aa11.29□□□□□ -0.6
LIMK1-208ENST00000538333 CDX1P47902 265 aaPredicted RBP11.29□□□□□ -0.6
LIMK1-208ENST00000538333 LGALS7P47929 136 aa11.29□□□□□ -0.6
LIMK1-208ENST00000538333 NDUFA6P56556 154 aa11.29□□□□□ -0.6
LIMK1-208ENST00000538333 C8orf46Q8TAG6 207 aa11.29□□□□□ -0.6
LIMK1-208ENST00000538333 ZNF503Q96F45 646 aa11.29□□□□□ -0.6
LIMK1-208ENST00000538333 OR5B12Q96R08 314 aa11.29□□□□□ -0.6
LIMK1-208ENST00000538333 FNDC4Q9H6D8 234 aaPredicted RBP11.29□□□□□ -0.6
LIMK1-208ENST00000538333 SRD5A3Q9H8P0 318 aa11.29□□□□□ -0.6
LIMK1-208ENST00000538333 A0A1W2PPI3 338 aa11.28□□□□□ -0.6
LIMK1-208ENST00000538333 PSMB11A5LHX3 300 aa11.28□□□□□ -0.6
LIMK1-208ENST00000538333 MT-CO2P00403 227 aa11.28□□□□□ -0.6
LIMK1-208ENST00000538333 RBP4P02753 201 aa11.28□□□□□ -0.6
LIMK1-208ENST00000538333 OR2T6Q8NHC8 308 aa11.28□□□□□ -0.6
LIMK1-208ENST00000538333 RNASEH2CQ8TDP1 164 aaKnown RBP11.28□□□□□ -0.6
LIMK1-208ENST00000538333 C11orf52Q96A22 123 aa11.28□□□□□ -0.6
LIMK1-208ENST00000538333 C19orf24Q9BVV8 132 aa11.28□□□□□ -0.6
LIMK1-208ENST00000538333 ARL2-SNX15V9GYD0 113 aa11.28□□□□□ -0.6
LIMK1-208ENST00000538333 PGPEP1LA6NFU8 196 aa11.28□□□□□ -0.6
LIMK1-208ENST00000538333 GGCTO75223 188 aaKnown RBP11.28□□□□□ -0.6
LIMK1-208ENST00000538333 CRYGBP07316 175 aa11.28□□□□□ -0.6
LIMK1-208ENST00000538333 S100PP25815 95 aa11.28□□□□□ -0.6
LIMK1-208ENST00000538333 PRB3Q04118 309 aaPredicted RBP11.28□□□□□ -0.6
LIMK1-208ENST00000538333 BEND2Q8NDZ0 799 aa11.28□□□□□ -0.6
LIMK1-208ENST00000538333 OR5T1Q8NG75 326 aa11.28□□□□□ -0.6
LIMK1-208ENST00000538333 CLEC7AQ9BXN2 247 aa11.28□□□□□ -0.6
LIMK1-208ENST00000538333 AURKAIP1Q9NWT8 199 aaPredicted RBP11.28□□□□□ -0.6
LIMK1-208ENST00000538333 ATRXP46100 2492 aa11.27□□□□□ -0.6
LIMK1-208ENST00000538333 PPIAL4CA0A0B4J2A2 164 aa11.27□□□□□ -0.6
LIMK1-208ENST00000538333 BUB1B-PAK6H3BSN5 160 aa11.27□□□□□ -0.6
LIMK1-208ENST00000538333 PPIAL4GP0DN37 164 aa11.27□□□□□ -0.6
LIMK1-208ENST00000538333 AREGP15514 252 aa11.27□□□□□ -0.6
LIMK1-208ENST00000538333 SRP14P37108 136 aaKnown RBP11.27□□□□□ -0.6
LIMK1-208ENST00000538333 PRRX1P54821 245 aa11.27□□□□□ -0.6
LIMK1-208ENST00000538333 TEX45Q8NA69 505 aa11.27□□□□□ -0.6
LIMK1-208ENST00000538333 TMEM37Q8WXS4 190 aa11.27□□□□□ -0.6
LIMK1-208ENST00000538333 TECRQ9NZ01 308 aaKnown RBP11.27□□□□□ -0.6
LIMK1-208ENST00000538333 ACACBO00763 2458 aa11.27□□□□□ -0.61
LIMK1-208ENST00000538333 ENSAO43768 121 aaKnown RBP11.27□□□□□ -0.61
LIMK1-208ENST00000538333 SSBP2P81877 361 aaPredicted RBP11.27□□□□□ -0.61
LIMK1-208ENST00000538333 PQLC2Q6ZP29 291 aa11.27□□□□□ -0.61
LIMK1-208ENST00000538333 ACY3Q96HD9 319 aa11.27□□□□□ -0.61
LIMK1-208ENST00000538333 NBASA2RRP1 2371 aa11.26□□□□□ -0.61
LIMK1-208ENST00000538333 IGHV1-3A0A0C4DH29 117 aa11.26□□□□□ -0.61
LIMK1-208ENST00000538333 IGLC7A0M8Q6 106 aa11.26□□□□□ -0.61
LIMK1-208ENST00000538333 S100A9P06702 114 aaKnown RBP11.26□□□□□ -0.61
LIMK1-208ENST00000538333 CNTFRP26992 372 aa11.26□□□□□ -0.61
LIMK1-208ENST00000538333 SUB1P53999 127 aaKnown RBP eCLIP11.26□□□□□ -0.61
LIMK1-208ENST00000538333 PSG5Q15238 335 aa11.26□□□□□ -0.61
LIMK1-208ENST00000538333 PRSS8Q16651 343 aa11.26□□□□□ -0.61
LIMK1-208ENST00000538333 PVRIGQ6DKI7 326 aa11.26□□□□□ -0.61
LIMK1-208ENST00000538333 C11orf71Q6IPW1 123 aa11.26□□□□□ -0.61
LIMK1-208ENST00000538333 DCHS2Q6V1P9 2916 aa11.26□□□□□ -0.61
LIMK1-208ENST00000538333 LY6G5BQ8NDX9 201 aa11.26□□□□□ -0.61
LIMK1-208ENST00000538333 OR4X1Q8NH49 305 aa11.26□□□□□ -0.61
LIMK1-208ENST00000538333 SLC25A33Q9BSK2 321 aa11.26□□□□□ -0.61
LIMK1-208ENST00000538333 TMEM167BQ9NRX6 74 aa11.26□□□□□ -0.61
LIMK1-208ENST00000538333 IGKV1D-37A0A075B6S9 117 aa11.26□□□□□ -0.61
LIMK1-208ENST00000538333 A0A1W2PPQ1 181 aa11.26□□□□□ -0.61
LIMK1-208ENST00000538333 LY6HO94772 140 aa11.26□□□□□ -0.61
LIMK1-208ENST00000538333 TYMSP04818 313 aa11.26□□□□□ -0.61
LIMK1-208ENST00000538333 C4orf17Q53FE4 359 aa11.26□□□□□ -0.61
LIMK1-208ENST00000538333 UNQ6494/PRO21346Q6UXR6 183 aa11.26□□□□□ -0.61
LIMK1-208ENST00000538333 OR8B3Q8NGG8 313 aa11.26□□□□□ -0.61
LIMK1-208ENST00000538333 OR2T10Q8NGZ9 312 aa11.26□□□□□ -0.61
LIMK1-208ENST00000538333 SFRP2Q96HF1 295 aa11.26□□□□□ -0.61
LIMK1-208ENST00000538333 OR8B2Q96RD0 313 aa11.26□□□□□ -0.61
LIMK1-208ENST00000538333 MRPL36Q9P0J6 103 aaKnown RBP11.26□□□□□ -0.61
LIMK1-208ENST00000538333 LRBAP50851 2863 aa11.25□□□□□ -0.61
LIMK1-208ENST00000538333 LY6LH3BQJ8 138 aa11.25□□□□□ -0.61
LIMK1-208ENST00000538333 SOD3P08294 240 aa11.25□□□□□ -0.61
LIMK1-208ENST00000538333 CLEC12BQ2HXU8 276 aa11.25□□□□□ -0.61
LIMK1-208ENST00000538333 MMD2Q8IY49 270 aa11.25□□□□□ -0.61
LIMK1-208ENST00000538333 THAP8Q8NA92 274 aa11.25□□□□□ -0.61
LIMK1-208ENST00000538333 OCC1Q8TAD7 63 aa11.25□□□□□ -0.61
LIMK1-208ENST00000538333 MRPL32Q9BYC8 188 aaKnown RBP11.25□□□□□ -0.61
LIMK1-208ENST00000538333 RAB1BQ9H0U4 201 aa11.25□□□□□ -0.61
LIMK1-208ENST00000538333 CBLN4Q9NTU7 201 aa11.25□□□□□ -0.61
LIMK1-208ENST00000538333 MIOXQ9UGB7 285 aa11.25□□□□□ -0.61
LIMK1-208ENST00000538333 INSIG2Q9Y5U4 225 aa11.25□□□□□ -0.61
LIMK1-208ENST00000538333 C22orf46C9J442 243 aa11.24□□□□□ -0.61
LIMK1-208ENST00000538333 C9JCJ5 164 aa11.24□□□□□ -0.61
LIMK1-208ENST00000538333 PPP5D1E7EU14 171 aa11.24□□□□□ -0.61
LIMK1-208ENST00000538333 PPP1R2P9O14990 202 aa11.24□□□□□ -0.61
LIMK1-208ENST00000538333 REG1AP05451 166 aa11.24□□□□□ -0.61
LIMK1-208ENST00000538333 C8orf88P0DMB2 117 aa11.24□□□□□ -0.61
LIMK1-208ENST00000538333 TAS2R45P59539 299 aa11.24□□□□□ -0.61
LIMK1-208ENST00000538333 GFI1BQ5VTD9 330 aa11.24□□□□□ -0.61
LIMK1-208ENST00000538333 MORN5Q5VZ52 161 aa11.24□□□□□ -0.61
LIMK1-208ENST00000538333 NPIPB3Q92617 1050 aa11.24□□□□□ -0.61
LIMK1-208ENST00000538333 FAM167A-AS1Q96KT0 104 aa11.24□□□□□ -0.61
LIMK1-208ENST00000538333 UHRF2Q96PU4 802 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms