RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 SRRM5B3KS81 715 aa4.44□□□□□ -1.7
LRP6-203ENST00000538239 GCGP01275 180 aa4.44□□□□□ -1.7
LRP6-203ENST00000538239 NMUP48645 174 aa4.44□□□□□ -1.7
LRP6-203ENST00000538239 MIR17HGQ75NE6 70 aa4.44□□□□□ -1.7
LRP6-203ENST00000538239 OR52E5Q8NH55 327 aa4.44□□□□□ -1.7
LRP6-203ENST00000538239 TMEM101Q96IK0 257 aa4.44□□□□□ -1.7
LRP6-203ENST00000538239 AQP10Q96PS8 301 aa4.44□□□□□ -1.7
LRP6-203ENST00000538239 SDF2L1Q9HCN8 221 aa4.44□□□□□ -1.7
LRP6-203ENST00000538239 PLSCR2Q9NRY7 297 aa4.44□□□□□ -1.7
LRP6-203ENST00000538239 BEX4Q9NWD9 120 aaPredicted RBP4.44□□□□□ -1.7
LRP6-203ENST00000538239 DOCK8Q8NF50 2099 aa4.44□□□□□ -1.7
LRP6-203ENST00000538239 NUP210Q8TEM1 1887 aaPredicted RBP4.44□□□□□ -1.7
LRP6-203ENST00000538239 IGKV1-12A0A0C4DH73 117 aa4.44□□□□□ -1.7
LRP6-203ENST00000538239 IGKV1D-12P01611 117 aa4.44□□□□□ -1.7
LRP6-203ENST00000538239 RNASE1P07998 156 aaKnown RBP4.44□□□□□ -1.7
LRP6-203ENST00000538239 ERVK11-1P61568 191 aa4.44□□□□□ -1.7
LRP6-203ENST00000538239 FAM71F2Q6NXP2 309 aa4.44□□□□□ -1.7
LRP6-203ENST00000538239 ASXL3Q9C0F0 2248 aa4.43□□□□□ -1.7
LRP6-203ENST00000538239 IGKV1-27A0A075B6S5 117 aa4.43□□□□□ -1.7
LRP6-203ENST00000538239 MPTX1A8MV57 137 aa4.43□□□□□ -1.7
LRP6-203ENST00000538239 FHITP49789 147 aa4.43□□□□□ -1.7
LRP6-203ENST00000538239 RPUSD1Q9UJJ7 312 aaKnown RBP4.43□□□□□ -1.7
LRP6-203ENST00000538239 ANAPC1Q9H1A4 1944 aa4.43□□□□□ -1.7
LRP6-203ENST00000538239 LEPP41159 167 aa4.43□□□□□ -1.7
LRP6-203ENST00000538239 GATAD1Q8WUU5 269 aa4.43□□□□□ -1.7
LRP6-203ENST00000538239 Q9H3A6 140 aa4.43□□□□□ -1.7
LRP6-203ENST00000538239 PPP1R17O96001 155 aa4.43□□□□□ -1.7
LRP6-203ENST00000538239 MSMBP08118 114 aa4.43□□□□□ -1.7
LRP6-203ENST00000538239 ATP5IP56385 69 aaPredicted RBP4.43□□□□□ -1.7
LRP6-203ENST00000538239 CENPWQ5EE01 88 aa4.43□□□□□ -1.7
LRP6-203ENST00000538239 ZNF324BQ6AW86 544 aaPredicted RBP4.43□□□□□ -1.7
LRP6-203ENST00000538239 TRBV20OR9-2A0A075B6H5 130 aa4.43□□□□□ -1.7
LRP6-203ENST00000538239 H7C2G1 150 aa4.43□□□□□ -1.7
LRP6-203ENST00000538239 M0R1W7 72 aa4.43□□□□□ -1.7
LRP6-203ENST00000538239 CD7P09564 240 aa4.43□□□□□ -1.7
LRP6-203ENST00000538239 FXYD7P58549 80 aa4.43□□□□□ -1.7
LRP6-203ENST00000538239 PSMG4Q5JS54 123 aa4.43□□□□□ -1.7
LRP6-203ENST00000538239 SAPCD1Q5SSQ6 148 aa4.43□□□□□ -1.7
LRP6-203ENST00000538239 IGFL3Q6UXB1 125 aa4.43□□□□□ -1.7
LRP6-203ENST00000538239 C12orf57Q99622 126 aa4.43□□□□□ -1.7
LRP6-203ENST00000538239 PTPRDP23468 1912 aa4.43□□□□□ -1.7
LRP6-203ENST00000538239 PI4KAP42356 2102 aa4.43□□□□□ -1.7
LRP6-203ENST00000538239 GRIFINA4D1Z8 144 aa4.43□□□□□ -1.7
LRP6-203ENST00000538239 ZNF362Q5T0B9 420 aaPredicted RBP4.43□□□□□ -1.7
LRP6-203ENST00000538239 K7EM74 188 aa4.43□□□□□ -1.7
LRP6-203ENST00000538239 PSPNO60542 156 aa4.43□□□□□ -1.7
LRP6-203ENST00000538239 UCP1P25874 307 aa4.43□□□□□ -1.7
LRP6-203ENST00000538239 GNG5P63218 68 aa4.43□□□□□ -1.7
LRP6-203ENST00000538239 MINOS1Q5TGZ0 78 aa4.43□□□□□ -1.7
LRP6-203ENST00000538239 TNFRSF14Q92956 283 aa4.43□□□□□ -1.7
LRP6-203ENST00000538239 PNRC2Q9NPJ4 139 aaKnown RBP4.43□□□□□ -1.7
LRP6-203ENST00000538239 BET1LQ9NYM9 111 aa4.43□□□□□ -1.7
LRP6-203ENST00000538239 MINOS1-NBL1R4GNA1 71 aa4.43□□□□□ -1.7
LRP6-203ENST00000538239 F8VVB4 439 aa4.42□□□□□ -1.7
LRP6-203ENST00000538239 F8VWA3 439 aa4.42□□□□□ -1.7
LRP6-203ENST00000538239 BUB1B-PAK6H3BSN5 160 aa4.42□□□□□ -1.7
LRP6-203ENST00000538239 PRSS2P07478 247 aa4.42□□□□□ -1.7
LRP6-203ENST00000538239 DUTP33316 252 aaKnown RBP4.42□□□□□ -1.7
LRP6-203ENST00000538239 SAA4P35542 130 aa4.42□□□□□ -1.7
LRP6-203ENST00000538239 C10orf55Q5SWW7 151 aa4.42□□□□□ -1.7
LRP6-203ENST00000538239 TCF24Q7RTU0 167 aa4.42□□□□□ -1.7
LRP6-203ENST00000538239 DTX1Q86Y01 620 aa4.42□□□□□ -1.7
LRP6-203ENST00000538239 ARL6IP6Q8N6S5 226 aa4.42□□□□□ -1.7
LRP6-203ENST00000538239 RNF125Q96EQ8 232 aa4.42□□□□□ -1.7
LRP6-203ENST00000538239 MYLKQ15746 1914 aa4.42□□□□□ -1.7
LRP6-203ENST00000538239 H3BVH4 76 aa4.42□□□□□ -1.7
LRP6-203ENST00000538239 C15orf32Q32M92 178 aa4.42□□□□□ -1.7
LRP6-203ENST00000538239 SIGLEC15Q6ZMC9 328 aa4.42□□□□□ -1.7
LRP6-203ENST00000538239 OR5AN1Q8NGI8 311 aa4.42□□□□□ -1.7
LRP6-203ENST00000538239 KIR2DL4Q99706 377 aa4.42□□□□□ -1.7
LRP6-203ENST00000538239 ATG101Q9BSB4 218 aa4.42□□□□□ -1.7
LRP6-203ENST00000538239 GEMIN7Q9H840 131 aaKnown RBP4.42□□□□□ -1.7
LRP6-203ENST00000538239 NDUFS8O00217 210 aa4.42□□□□□ -1.7
LRP6-203ENST00000538239 CD55P08174 381 aa4.42□□□□□ -1.7
LRP6-203ENST00000538239 MEIG1Q5JSS6 88 aa4.42□□□□□ -1.7
LRP6-203ENST00000538239 C5orf24Q7Z6I8 188 aa4.42□□□□□ -1.7
LRP6-203ENST00000538239 PIP4P2Q8N4L2 257 aa4.42□□□□□ -1.7
LRP6-203ENST00000538239 CDC42EP3Q9UKI2 254 aa4.42□□□□□ -1.7
LRP6-203ENST00000538239 HELZP42694 1942 aaKnown RBP4.42□□□□□ -1.7
LRP6-203ENST00000538239 ZNF415Q09FC8 603 aa4.42□□□□□ -1.7
LRP6-203ENST00000538239 ZNF600Q6ZNG1 722 aa4.42□□□□□ -1.7
LRP6-203ENST00000538239 C18orf12Q96KH6 178 aa4.42□□□□□ -1.7
LRP6-203ENST00000538239 MRPL18Q9H0U6 180 aaKnown RBP4.42□□□□□ -1.7
LRP6-203ENST00000538239 PLXND1Q9Y4D7 1925 aa4.42□□□□□ -1.7
LRP6-203ENST00000538239 CACNA1EQ15878 2313 aa4.42□□□□□ -1.7
LRP6-203ENST00000538239 DNAJC13O75165 2243 aa4.42□□□□□ -1.7
LRP6-203ENST00000538239 SCO2A0A1W2PP80 73 aa4.42□□□□□ -1.7
LRP6-203ENST00000538239 PEX7O00628 323 aa4.42□□□□□ -1.7
LRP6-203ENST00000538239 SUMO2P61956 95 aaKnown RBP4.42□□□□□ -1.7
LRP6-203ENST00000538239 HGFACQ04756 655 aa4.42□□□□□ -1.7
LRP6-203ENST00000538239 VN1R17PQ8TDU5 208 aa4.42□□□□□ -1.7
LRP6-203ENST00000538239 GGACTQ9BVM4 153 aa4.42□□□□□ -1.7
LRP6-203ENST00000538239 PARLQ9H300 379 aa4.42□□□□□ -1.7
LRP6-203ENST00000538239 ZFP30Q9Y2G7 519 aa4.42□□□□□ -1.7
LRP6-203ENST00000538239 ZNF257Q9Y2Q1 563 aa4.42□□□□□ -1.7
LRP6-203ENST00000538239 ZNF250P15622 560 aa4.42□□□□□ -1.7
LRP6-203ENST00000538239 PAX1P15863 534 aa4.42□□□□□ -1.7
LRP6-203ENST00000538239 NDPQ00604 133 aa4.42□□□□□ -1.7
LRP6-203ENST00000538239 FBLN7Q53RD9 439 aa4.42□□□□□ -1.7
LRP6-203ENST00000538239 Q5BKY6 102 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms