RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 H3BML4 177 aa7.02□□□□□ -1.28
SRGAP1-202ENST00000537556 PSG5Q15238 335 aa7.02□□□□□ -1.28
SRGAP1-202ENST00000537556 RSPO1Q2MKA7 263 aaPredicted RBP7.02□□□□□ -1.28
SRGAP1-202ENST00000537556 C5orf47Q569G3 176 aa7.02□□□□□ -1.28
SRGAP1-202ENST00000537556 TRAT1Q6PIZ9 186 aa7.02□□□□□ -1.28
SRGAP1-202ENST00000537556 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.02□□□□□ -1.28
SRGAP1-202ENST00000537556 IL1F10Q8WWZ1 152 aa7.02□□□□□ -1.28
SRGAP1-202ENST00000537556 ZDHHC16Q969W1 377 aa7.02□□□□□ -1.28
SRGAP1-202ENST00000537556 HIGD1BQ9P298 99 aa7.02□□□□□ -1.28
SRGAP1-202ENST00000537556 TRBV6-6A0A0A6YYG2 114 aa7.02□□□□□ -1.29
SRGAP1-202ENST00000537556 SHISA8B8ZZ34 492 aa7.02□□□□□ -1.29
SRGAP1-202ENST00000537556 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.02□□□□□ -1.29
SRGAP1-202ENST00000537556 IGLV2-14P01704 120 aa7.02□□□□□ -1.29
SRGAP1-202ENST00000537556 ZXDAP98168 799 aa7.02□□□□□ -1.29
SRGAP1-202ENST00000537556 CR1LQ2VPA4 569 aa7.02□□□□□ -1.29
SRGAP1-202ENST00000537556 OSR1Q8TAX0 266 aaPredicted RBP7.02□□□□□ -1.29
SRGAP1-202ENST00000537556 SNRNP40Q96DI7 357 aaKnown RBP7.02□□□□□ -1.29
SRGAP1-202ENST00000537556 IGF2BP2-AS1Q96M15 143 aa7.02□□□□□ -1.29
SRGAP1-202ENST00000537556 TIMM8BQ9Y5J9 83 aaPredicted RBP7.02□□□□□ -1.29
SRGAP1-202ENST00000537556 ZIC3O60481 467 aa7.02□□□□□ -1.29
SRGAP1-202ENST00000537556 TMPRSS3P57727 454 aa7.02□□□□□ -1.29
SRGAP1-202ENST00000537556 FGF12P61328 243 aa7.02□□□□□ -1.29
SRGAP1-202ENST00000537556 LGALS9BQ3B8N2 356 aa7.02□□□□□ -1.29
SRGAP1-202ENST00000537556 LGALS9CQ6DKI2 356 aa7.02□□□□□ -1.29
SRGAP1-202ENST00000537556 CRIPAKQ8N1N5 446 aa7.02□□□□□ -1.29
SRGAP1-202ENST00000537556 TMEM116Q8NCL8 245 aa7.02□□□□□ -1.29
SRGAP1-202ENST00000537556 C8orf46Q8TAG6 207 aa7.02□□□□□ -1.29
SRGAP1-202ENST00000537556 MGST2Q99735 147 aa7.02□□□□□ -1.29
SRGAP1-202ENST00000537556 AP5S1Q9NUS5 200 aa7.02□□□□□ -1.29
SRGAP1-202ENST00000537556 C15orf62A8K5M9 175 aa7.01□□□□□ -1.29
SRGAP1-202ENST00000537556 IGLL5B9A064 214 aa7.01□□□□□ -1.29
SRGAP1-202ENST00000537556 FXYD2P54710 66 aa7.01□□□□□ -1.29
SRGAP1-202ENST00000537556 DAZAP2Q15038 168 aaPredicted RBP7.01□□□□□ -1.29
SRGAP1-202ENST00000537556 PHLDA1Q8WV24 401 aaPredicted RBP7.01□□□□□ -1.29
SRGAP1-202ENST00000537556 OXGR1Q96P68 337 aa7.01□□□□□ -1.29
SRGAP1-202ENST00000537556 POLDIP2Q9Y2S7 368 aa7.01□□□□□ -1.29
SRGAP1-202ENST00000537556 A0A087WX48 190 aa7.01□□□□□ -1.29
SRGAP1-202ENST00000537556 PRSS29PA6NIE9 313 aa7.01□□□□□ -1.29
SRGAP1-202ENST00000537556 TMEM262E9PQX1 116 aa7.01□□□□□ -1.29
SRGAP1-202ENST00000537556 HSPB6O14558 160 aa7.01□□□□□ -1.29
SRGAP1-202ENST00000537556 FOXH1O75593 365 aa7.01□□□□□ -1.29
SRGAP1-202ENST00000537556 NMUP48645 174 aa7.01□□□□□ -1.29
SRGAP1-202ENST00000537556 ATP5J2P56134 94 aa7.01□□□□□ -1.29
SRGAP1-202ENST00000537556 ABHD17BQ5VST6 288 aa7.01□□□□□ -1.29
SRGAP1-202ENST00000537556 H2BFWTQ7Z2G1 175 aa7.01□□□□□ -1.29
SRGAP1-202ENST00000537556 Q8TCH9 128 aa7.01□□□□□ -1.29
SRGAP1-202ENST00000537556 PIGCQ92535 297 aa7.01□□□□□ -1.29
SRGAP1-202ENST00000537556 PRELID3AQ96N28 172 aa7.01□□□□□ -1.29
SRGAP1-202ENST00000537556 NHP2Q9NX24 153 aaKnown RBP7.01□□□□□ -1.29
SRGAP1-202ENST00000537556 PRO0461Q9UI25 63 aa7.01□□□□□ -1.29
SRGAP1-202ENST00000537556 MYO9BQ13459 2157 aa7□□□□□ -1.29
SRGAP1-202ENST00000537556 P0C879 139 aa7□□□□□ -1.29
SRGAP1-202ENST00000537556 SUMO3P55854 103 aaPredicted RBP7□□□□□ -1.29
SRGAP1-202ENST00000537556 DEFB110Q30KQ9 67 aa7□□□□□ -1.29
SRGAP1-202ENST00000537556 ZBTB34Q8NCN2 500 aa7□□□□□ -1.29
SRGAP1-202ENST00000537556 TMUB1Q9BVT8 246 aa7□□□□□ -1.29
SRGAP1-202ENST00000537556 TMEM133Q9H2Q1 129 aa7□□□□□ -1.29
SRGAP1-202ENST00000537556 VPREB3Q9UKI3 123 aa7□□□□□ -1.29
SRGAP1-202ENST00000537556 CENPVL3A0A0U1RRI6 287 aa7□□□□□ -1.29
SRGAP1-202ENST00000537556 PRSS38A1L453 326 aa7□□□□□ -1.29
SRGAP1-202ENST00000537556 TMEM8BA6NDV4 472 aa7□□□□□ -1.29
SRGAP1-202ENST00000537556 IGKV3-11P04433 115 aa7□□□□□ -1.29
SRGAP1-202ENST00000537556 TM4SF20Q53R12 229 aa7□□□□□ -1.29
SRGAP1-202ENST00000537556 TMEM92Q6UXU6 159 aa7□□□□□ -1.29
SRGAP1-202ENST00000537556 DRAM1Q8N682 238 aa7□□□□□ -1.29
SRGAP1-202ENST00000537556 TMEM178AQ8NBL3 297 aa7□□□□□ -1.29
SRGAP1-202ENST00000537556 MMABQ96EY8 250 aaPredicted RBP7□□□□□ -1.29
SRGAP1-202ENST00000537556 HEYLQ9NQ87 328 aaPredicted RBP7□□□□□ -1.29
SRGAP1-202ENST00000537556 PCDH15Q96QU1 1955 aa7□□□□□ -1.29
SRGAP1-202ENST00000537556 FAM90A27PA6NNH2 459 aa6.99□□□□□ -1.29
SRGAP1-202ENST00000537556 NPIPB5A8MRT5 1133 aa6.99□□□□□ -1.29
SRGAP1-202ENST00000537556 CHEK1O14757 476 aa6.99□□□□□ -1.29
SRGAP1-202ENST00000537556 NHLRC4P0CG21 123 aaPredicted RBP6.99□□□□□ -1.29
SRGAP1-202ENST00000537556 MYF5P13349 255 aa6.99□□□□□ -1.29
SRGAP1-202ENST00000537556 PLP2Q04941 152 aa6.99□□□□□ -1.29
SRGAP1-202ENST00000537556 ADIPOQQ15848 244 aa6.99□□□□□ -1.29
SRGAP1-202ENST00000537556 ZNF77Q15935 545 aa6.99□□□□□ -1.29
SRGAP1-202ENST00000537556 PPP1R35Q8TAP8 253 aa6.99□□□□□ -1.29
SRGAP1-202ENST00000537556 ZNF296Q8WUU4 475 aaPredicted RBP6.99□□□□□ -1.29
SRGAP1-202ENST00000537556 SSMEM1Q8WWF3 244 aa6.99□□□□□ -1.29
SRGAP1-202ENST00000537556 MAP1LC3AQ9H492 121 aa6.99□□□□□ -1.29
SRGAP1-202ENST00000537556 F11RQ9Y624 299 aaKnown RBP6.99□□□□□ -1.29
SRGAP1-202ENST00000537556 TMEM150CB9EJG8 249 aa6.99□□□□□ -1.29
SRGAP1-202ENST00000537556 M0QXV9 152 aa6.99□□□□□ -1.29
SRGAP1-202ENST00000537556 MGST3O14880 152 aa6.99□□□□□ -1.29
SRGAP1-202ENST00000537556 SRD5A1P18405 259 aa6.99□□□□□ -1.29
SRGAP1-202ENST00000537556 BCL3P20749 454 aa6.99□□□□□ -1.29
SRGAP1-202ENST00000537556 RSPO4Q2I0M5 234 aaPredicted RBP6.99□□□□□ -1.29
SRGAP1-202ENST00000537556 TTC32Q5I0X7 151 aa6.99□□□□□ -1.29
SRGAP1-202ENST00000537556 Q6ZR03 302 aa6.99□□□□□ -1.29
SRGAP1-202ENST00000537556 LINC00596Q86U02 117 aa6.99□□□□□ -1.29
SRGAP1-202ENST00000537556 SMRP1Q8NCR6 262 aa6.99□□□□□ -1.29
SRGAP1-202ENST00000537556 PTH2Q96A98 100 aa6.99□□□□□ -1.29
SRGAP1-202ENST00000537556 C18orf15Q96N68 181 aa6.99□□□□□ -1.29
SRGAP1-202ENST00000537556 CITED2Q99967 270 aaPredicted RBP6.99□□□□□ -1.29
SRGAP1-202ENST00000537556 IL23AQ9NPF7 189 aa6.99□□□□□ -1.29
SRGAP1-202ENST00000537556 TRAV5A0A0B4J249 113 aa6.99□□□□□ -1.29
SRGAP1-202ENST00000537556 TCRBV4S1A1TA0A5B7 111 aa6.99□□□□□ -1.29
SRGAP1-202ENST00000537556 FAM90A9PA6NNJ1 464 aa6.99□□□□□ -1.29
SRGAP1-202ENST00000537556 K7ERJ3 54 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms