RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 S100A5P33763 92 aa12.96□□□□□ -0.33
SFSWAP-205ENST00000537164 ETV6P41212 452 aa12.96□□□□□ -0.33
SFSWAP-205ENST00000537164 KLF9Q13886 244 aaPredicted RBP12.96□□□□□ -0.33
SFSWAP-205ENST00000537164 TM4SF20Q53R12 229 aa12.96□□□□□ -0.33
SFSWAP-205ENST00000537164 Q6ZRM9 215 aa12.96□□□□□ -0.33
SFSWAP-205ENST00000537164 UXS1Q8NBZ7 420 aa12.96□□□□□ -0.33
SFSWAP-205ENST00000537164 CACNG8Q8WXS5 425 aa12.96□□□□□ -0.33
SFSWAP-205ENST00000537164 TMEM230Q96A57 120 aa12.96□□□□□ -0.33
SFSWAP-205ENST00000537164 CHRDL1Q9BU40 450 aa12.96□□□□□ -0.33
SFSWAP-205ENST00000537164 MRPL27Q9P0M9 148 aaKnown RBP12.96□□□□□ -0.33
SFSWAP-205ENST00000537164 MLXQ9UH92 298 aa12.96□□□□□ -0.33
SFSWAP-205ENST00000537164 UFC1Q9Y3C8 167 aa12.96□□□□□ -0.33
SFSWAP-205ENST00000537164 SELENOHQ8IZQ5 122 aaKnown RBP12.95□□□□□ -0.34
SFSWAP-205ENST00000537164 OR52E5Q8NH55 327 aa12.95□□□□□ -0.34
SFSWAP-205ENST00000537164 IL22RA2Q969J5 263 aa12.95□□□□□ -0.34
SFSWAP-205ENST00000537164 ZNF414Q96IQ9 312 aa12.95□□□□□ -0.34
SFSWAP-205ENST00000537164 TM2D3Q9BRN9 247 aa12.95□□□□□ -0.34
SFSWAP-205ENST00000537164 IGHV3-21A0A0B4J1V1 117 aa12.94□□□□□ -0.34
SFSWAP-205ENST00000537164 IFNA17P01571 189 aa12.94□□□□□ -0.34
SFSWAP-205ENST00000537164 FAUP35544 74 aaKnown RBP12.94□□□□□ -0.34
SFSWAP-205ENST00000537164 MFAP4P55083 255 aa12.94□□□□□ -0.34
SFSWAP-205ENST00000537164 AP3S2P59780 193 aa12.94□□□□□ -0.34
SFSWAP-205ENST00000537164 BSXQ3C1V8 233 aa12.94□□□□□ -0.34
SFSWAP-205ENST00000537164 PYDC2Q56P42 97 aa12.94□□□□□ -0.34
SFSWAP-205ENST00000537164 ZNF57Q68EA5 555 aaPredicted RBP12.94□□□□□ -0.34
SFSWAP-205ENST00000537164 TMEM61Q8N0U2 210 aa12.94□□□□□ -0.34
SFSWAP-205ENST00000537164 SLC35G3Q8N808 338 aa12.94□□□□□ -0.34
SFSWAP-205ENST00000537164 PDCD10Q9BUL8 212 aa12.94□□□□□ -0.34
SFSWAP-205ENST00000537164 DAZ1Q9NQZ3 744 aaKnown RBP12.94□□□□□ -0.34
SFSWAP-205ENST00000537164 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.94□□□□□ -0.34
SFSWAP-205ENST00000537164 MCUBQ9NWR8 336 aa12.94□□□□□ -0.34
SFSWAP-205ENST00000537164 KCNIP3Q9Y2W7 256 aa12.94□□□□□ -0.34
SFSWAP-205ENST00000537164 DNAH7Q8WXX0 4024 aa12.93□□□□□ -0.34
SFSWAP-205ENST00000537164 TRAV25A0A0B4J276 109 aa12.93□□□□□ -0.34
SFSWAP-205ENST00000537164 IGHV3-35A0A0C4DH35 117 aa12.93□□□□□ -0.34
SFSWAP-205ENST00000537164 K7EMT4 169 aa12.93□□□□□ -0.34
SFSWAP-205ENST00000537164 MT-CO2P00403 227 aa12.93□□□□□ -0.34
SFSWAP-205ENST00000537164 SNCAP37840 140 aa12.93□□□□□ -0.34
SFSWAP-205ENST00000537164 SPCS3P61009 180 aa12.93□□□□□ -0.34
SFSWAP-205ENST00000537164 SUPT4H1P63272 117 aaKnown RBP12.93□□□□□ -0.34
SFSWAP-205ENST00000537164 TMEM187Q14656 261 aa12.93□□□□□ -0.34
SFSWAP-205ENST00000537164 SPINK9Q5DT21 86 aa12.93□□□□□ -0.34
SFSWAP-205ENST00000537164 LINC00322Q6ZN03 302 aaPredicted RBP12.93□□□□□ -0.34
SFSWAP-205ENST00000537164 TOMM5Q8N4H5 51 aa12.93□□□□□ -0.34
SFSWAP-205ENST00000537164 MISP3Q96FF7 219 aa12.93□□□□□ -0.34
SFSWAP-205ENST00000537164 WDR89Q96FK6 387 aaPredicted RBP12.93□□□□□ -0.34
SFSWAP-205ENST00000537164 NEURL2Q9BR09 285 aa12.93□□□□□ -0.34
SFSWAP-205ENST00000537164 C15orf62A8K5M9 175 aa12.92□□□□□ -0.34
SFSWAP-205ENST00000537164 CD7P09564 240 aa12.92□□□□□ -0.34
SFSWAP-205ENST00000537164 RNASE2P10153 161 aaKnown RBP12.92□□□□□ -0.34
SFSWAP-205ENST00000537164 CD81P60033 236 aa12.92□□□□□ -0.34
SFSWAP-205ENST00000537164 Q56UQ5 140 aa12.92□□□□□ -0.34
SFSWAP-205ENST00000537164 TMEM268Q5VZI3 342 aa12.92□□□□□ -0.34
SFSWAP-205ENST00000537164 UBAC2Q8NBM4 344 aa12.92□□□□□ -0.34
SFSWAP-205ENST00000537164 RNASE11Q8TAA1 199 aaKnown RBP12.92□□□□□ -0.34
SFSWAP-205ENST00000537164 GPR146Q96CH1 333 aa12.92□□□□□ -0.34
SFSWAP-205ENST00000537164 OR10C1Q96KK4 312 aa12.92□□□□□ -0.34
SFSWAP-205ENST00000537164 CORTO00230 105 aa12.91□□□□□ -0.34
SFSWAP-205ENST00000537164 NUPL2O15504 423 aaKnown RBP12.91□□□□□ -0.34
SFSWAP-205ENST00000537164 SUB1P53999 127 aaKnown RBP eCLIP12.91□□□□□ -0.34
SFSWAP-205ENST00000537164 RELQ04864 619 aaPredicted RBP12.91□□□□□ -0.34
SFSWAP-205ENST00000537164 BTNL8Q6UX41 500 aa12.91□□□□□ -0.34
SFSWAP-205ENST00000537164 RCHY1Q96PM5 261 aa12.91□□□□□ -0.34
SFSWAP-205ENST00000537164 ZMAT4Q9H898 229 aa12.91□□□□□ -0.34
SFSWAP-205ENST00000537164 CACFD1Q9UGQ2 172 aa12.91□□□□□ -0.34
SFSWAP-205ENST00000537164 A0A0B4J2A0 478 aa12.9□□□□□ -0.34
SFSWAP-205ENST00000537164 HOXA1P49639 335 aaPredicted RBP12.9□□□□□ -0.34
SFSWAP-205ENST00000537164 GUCA2BQ16661 112 aa12.9□□□□□ -0.34
SFSWAP-205ENST00000537164 SPANXN2Q5MJ10 180 aa12.9□□□□□ -0.34
SFSWAP-205ENST00000537164 PINX1Q96BK5 328 aaKnown RBP12.9□□□□□ -0.34
SFSWAP-205ENST00000537164 SLC25A21Q9BQT8 299 aaPredicted RBP12.9□□□□□ -0.34
SFSWAP-205ENST00000537164 SRRQ9GZT4 340 aa12.9□□□□□ -0.34
SFSWAP-205ENST00000537164 TUBA4BQ9H853 241 aa12.9□□□□□ -0.34
SFSWAP-205ENST00000537164 CACNG5Q9UF02 275 aa12.9□□□□□ -0.34
SFSWAP-205ENST00000537164 SHPKQ9UHJ6 478 aa12.9□□□□□ -0.34
SFSWAP-205ENST00000537164 AKR1C4P17516 323 aa12.89□□□□□ -0.35
SFSWAP-205ENST00000537164 NPBWR1P48145 328 aa12.89□□□□□ -0.35
SFSWAP-205ENST00000537164 HAGHQ16775 308 aa12.89□□□□□ -0.35
SFSWAP-205ENST00000537164 ANKRD55Q3KP44 614 aa12.89□□□□□ -0.35
SFSWAP-205ENST00000537164 TMEM128Q5BJH2 165 aa12.89□□□□□ -0.35
SFSWAP-205ENST00000537164 NMSQ5H8A3 153 aa12.89□□□□□ -0.35
SFSWAP-205ENST00000537164 SLC16A13Q7RTY0 426 aa12.89□□□□□ -0.35
SFSWAP-205ENST00000537164 ENY2Q9NPA8 101 aa12.89□□□□□ -0.35
SFSWAP-205ENST00000537164 KMT2CQ8NEZ4 4911 aaKnown RBP12.88□□□□□ -0.35
SFSWAP-205ENST00000537164 PIGBOS1A0A0B4J2F0 54 aa12.88□□□□□ -0.35
SFSWAP-205ENST00000537164 OR11H12B2RN74 326 aa12.88□□□□□ -0.35
SFSWAP-205ENST00000537164 TSPAN4O14817 238 aa12.88□□□□□ -0.35
SFSWAP-205ENST00000537164 GNG7O60262 68 aa12.88□□□□□ -0.35
SFSWAP-205ENST00000537164 IGHV3-48P01763 117 aa12.88□□□□□ -0.35
SFSWAP-205ENST00000537164 ANXA3P12429 323 aa12.88□□□□□ -0.35
SFSWAP-205ENST00000537164 HTR2BP41595 481 aa12.88□□□□□ -0.35
SFSWAP-205ENST00000537164 SRPXP78539 464 aa12.88□□□□□ -0.35
SFSWAP-205ENST00000537164 DUSP18Q8NEJ0 188 aa12.88□□□□□ -0.35
SFSWAP-205ENST00000537164 SPAG8Q99932 426 aaPredicted RBP12.88□□□□□ -0.35
SFSWAP-205ENST00000537164 FNDC4Q9H6D8 234 aaPredicted RBP12.88□□□□□ -0.35
SFSWAP-205ENST00000537164 NDUFA13Q9P0J0 144 aa12.88□□□□□ -0.35
SFSWAP-205ENST00000537164 SCAF4O95104 1147 aaKnown RBP12.87□□□□□ -0.35
SFSWAP-205ENST00000537164 TMEM50AO95807 157 aa12.87□□□□□ -0.35
SFSWAP-205ENST00000537164 SULT1A3P0DMM9 295 aa12.87□□□□□ -0.35
SFSWAP-205ENST00000537164 SULT1A4P0DMN0 295 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms