RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 CORO2AQ92828 525 aa10.5□□□□□ -0.73
CDK5RAP3-202ENST00000536708 PARLQ9H300 379 aa10.5□□□□□ -0.73
CDK5RAP3-202ENST00000536708 LINC00574Q9H8X3 128 aa10.5□□□□□ -0.73
CDK5RAP3-202ENST00000536708 VWC2LB2RUY7 222 aa10.49□□□□□ -0.73
CDK5RAP3-202ENST00000536708 OPRK1P41145 380 aa10.49□□□□□ -0.73
CDK5RAP3-202ENST00000536708 CDC34P49427 236 aaPredicted RBP10.49□□□□□ -0.73
CDK5RAP3-202ENST00000536708 SPINK9Q5DT21 86 aa10.49□□□□□ -0.73
CDK5RAP3-202ENST00000536708 NDUFAF3Q9BU61 184 aa10.49□□□□□ -0.73
CDK5RAP3-202ENST00000536708 LPAR2Q9HBW0 351 aa10.49□□□□□ -0.73
CDK5RAP3-202ENST00000536708 VENTXO95231 258 aa10.48□□□□□ -0.73
CDK5RAP3-202ENST00000536708 ADIRFQ15847 76 aa10.48□□□□□ -0.73
CDK5RAP3-202ENST00000536708 TMEM30BQ3MIR4 351 aa10.48□□□□□ -0.73
CDK5RAP3-202ENST00000536708 RPL39P5Q59GN2 51 aa10.48□□□□□ -0.73
CDK5RAP3-202ENST00000536708 C11orf42Q8N5U0 333 aa10.48□□□□□ -0.73
CDK5RAP3-202ENST00000536708 OR4S2Q8NH73 311 aa10.48□□□□□ -0.73
CDK5RAP3-202ENST00000536708 ANAPC16Q96DE5 110 aa10.48□□□□□ -0.73
CDK5RAP3-202ENST00000536708 MISP3Q96FF7 219 aa10.48□□□□□ -0.73
CDK5RAP3-202ENST00000536708 GAL3ST2Q9H3Q3 398 aa10.48□□□□□ -0.73
CDK5RAP3-202ENST00000536708 IDI2-AS1Q9NZ38 188 aa10.48□□□□□ -0.73
CDK5RAP3-202ENST00000536708 PRRC2AP48634 2157 aaKnown RBP10.48□□□□□ -0.73
CDK5RAP3-202ENST00000536708 PPIAL4CA0A0B4J2A2 164 aa10.48□□□□□ -0.73
CDK5RAP3-202ENST00000536708 A8MWP6 167 aa10.48□□□□□ -0.73
CDK5RAP3-202ENST00000536708 HMGB3O15347 200 aaKnown RBP10.48□□□□□ -0.73
CDK5RAP3-202ENST00000536708 PPIAL4GP0DN37 164 aa10.48□□□□□ -0.73
CDK5RAP3-202ENST00000536708 THBS3P49746 956 aa10.48□□□□□ -0.73
CDK5RAP3-202ENST00000536708 POU2AF1Q16633 256 aa10.48□□□□□ -0.73
CDK5RAP3-202ENST00000536708 DEFB113Q30KQ7 82 aa10.48□□□□□ -0.73
CDK5RAP3-202ENST00000536708 ADTRPQ96IZ2 230 aa10.48□□□□□ -0.73
CDK5RAP3-202ENST00000536708 TXNDC17Q9BRA2 123 aa10.48□□□□□ -0.73
CDK5RAP3-202ENST00000536708 TMEM140Q9NV12 185 aa10.48□□□□□ -0.73
CDK5RAP3-202ENST00000536708 ONECUT1Q9UBC0 465 aa10.48□□□□□ -0.73
CDK5RAP3-202ENST00000536708 XKRY2A2RUG3 117 aa10.47□□□□□ -0.73
CDK5RAP3-202ENST00000536708 PAGE4O60829 102 aa10.47□□□□□ -0.73
CDK5RAP3-202ENST00000536708 RPS16P62249 146 aaKnown RBP10.47□□□□□ -0.73
CDK5RAP3-202ENST00000536708 HNF4GQ14541 408 aa10.47□□□□□ -0.73
CDK5RAP3-202ENST00000536708 CLEC12BQ2HXU8 276 aa10.47□□□□□ -0.73
CDK5RAP3-202ENST00000536708 CT45A1Q5HYN5 189 aa10.47□□□□□ -0.73
CDK5RAP3-202ENST00000536708 TREML4Q6UXN2 200 aa10.47□□□□□ -0.73
CDK5RAP3-202ENST00000536708 C1orf229Q6ZS94 237 aaPredicted RBP10.47□□□□□ -0.73
CDK5RAP3-202ENST00000536708 ZNF664Q8N3J9 261 aa10.47□□□□□ -0.73
CDK5RAP3-202ENST00000536708 ZNF439Q8NDP4 499 aa10.47□□□□□ -0.73
CDK5RAP3-202ENST00000536708 OR51G1Q8NGK1 321 aa10.47□□□□□ -0.73
CDK5RAP3-202ENST00000536708 OR4F5Q8NH21 305 aa10.47□□□□□ -0.73
CDK5RAP3-202ENST00000536708 CT45A3Q8NHU0 189 aa10.47□□□□□ -0.73
CDK5RAP3-202ENST00000536708 GATAD1Q8WUU5 269 aa10.47□□□□□ -0.73
CDK5RAP3-202ENST00000536708 RPUSD4Q96CM3 377 aaKnown RBP10.47□□□□□ -0.73
CDK5RAP3-202ENST00000536708 OR4F4Q96R69 305 aa10.47□□□□□ -0.73
CDK5RAP3-202ENST00000536708 TCF19Q9Y242 345 aa10.47□□□□□ -0.73
CDK5RAP3-202ENST00000536708 FOXA2Q9Y261 457 aaPredicted RBP10.47□□□□□ -0.73
CDK5RAP3-202ENST00000536708 C15orf61A6NNL5 157 aa10.46□□□□□ -0.73
CDK5RAP3-202ENST00000536708 RRHO14718 337 aa10.46□□□□□ -0.73
CDK5RAP3-202ENST00000536708 PDE6DO43924 150 aa10.46□□□□□ -0.73
CDK5RAP3-202ENST00000536708 GCGP01275 180 aa10.46□□□□□ -0.73
CDK5RAP3-202ENST00000536708 SNRPCP09234 159 aaKnown RBP10.46□□□□□ -0.73
CDK5RAP3-202ENST00000536708 GALR1P47211 349 aa10.46□□□□□ -0.73
CDK5RAP3-202ENST00000536708 RAB4BP61018 213 aa10.46□□□□□ -0.73
CDK5RAP3-202ENST00000536708 ZNF124Q15973 351 aa10.46□□□□□ -0.73
CDK5RAP3-202ENST00000536708 NECAP1Q8NC96 275 aa10.46□□□□□ -0.73
CDK5RAP3-202ENST00000536708 BEND2Q8NDZ0 799 aa10.46□□□□□ -0.73
CDK5RAP3-202ENST00000536708 C8orf46Q8TAG6 207 aa10.46□□□□□ -0.73
CDK5RAP3-202ENST00000536708 TMEM170AQ8WVE7 144 aa10.46□□□□□ -0.73
CDK5RAP3-202ENST00000536708 ACY3Q96HD9 319 aa10.46□□□□□ -0.73
CDK5RAP3-202ENST00000536708 HEYLQ9NQ87 328 aaPredicted RBP10.46□□□□□ -0.73
CDK5RAP3-202ENST00000536708 LSM4Q9Y4Z0 139 aaKnown RBP10.46□□□□□ -0.73
CDK5RAP3-202ENST00000536708 NOTCH2Q04721 2471 aa10.46□□□□□ -0.73
CDK5RAP3-202ENST00000536708 LOC105371242A0A075B767 164 aa10.46□□□□□ -0.74
CDK5RAP3-202ENST00000536708 TRAV3A0A0B4J244 114 aa10.46□□□□□ -0.74
CDK5RAP3-202ENST00000536708 H7BYZ3 331 aa10.46□□□□□ -0.74
CDK5RAP3-202ENST00000536708 NDUFS8O00217 210 aa10.46□□□□□ -0.74
CDK5RAP3-202ENST00000536708 IL6RP08887 468 aaPredicted RBP10.46□□□□□ -0.74
CDK5RAP3-202ENST00000536708 IGHV1-8P0DP01 117 aa10.46□□□□□ -0.74
CDK5RAP3-202ENST00000536708 NPPCP23582 126 aa10.46□□□□□ -0.74
CDK5RAP3-202ENST00000536708 MAPK1IP1LQ8NDC0 245 aa10.46□□□□□ -0.74
CDK5RAP3-202ENST00000536708 LY6G5BQ8NDX9 201 aa10.46□□□□□ -0.74
CDK5RAP3-202ENST00000536708 OR5B12Q96R08 314 aa10.46□□□□□ -0.74
CDK5RAP3-202ENST00000536708 KCNIP2Q9NS61 270 aa10.46□□□□□ -0.74
CDK5RAP3-202ENST00000536708 TMEM14BQ9NUH8 114 aa10.46□□□□□ -0.74
CDK5RAP3-202ENST00000536708 AKAP9Q99996 3911 aa10.46□□□□□ -0.74
CDK5RAP3-202ENST00000536708 TLN2Q9Y4G6 2542 aa10.46□□□□□ -0.74
CDK5RAP3-202ENST00000536708 MYO9AB2RTY4 2548 aa10.45□□□□□ -0.74
CDK5RAP3-202ENST00000536708 TEX15Q9BXT5 2789 aa10.45□□□□□ -0.74
CDK5RAP3-202ENST00000536708 C11orf94C9JXX5 98 aa10.45□□□□□ -0.74
CDK5RAP3-202ENST00000536708 FNDC10F2Z333 226 aa10.45□□□□□ -0.74
CDK5RAP3-202ENST00000536708 HRASP01112 189 aa10.45□□□□□ -0.74
CDK5RAP3-202ENST00000536708 HSPE1P61604 102 aaKnown RBP10.45□□□□□ -0.74
CDK5RAP3-202ENST00000536708 ARF6P62330 175 aa10.45□□□□□ -0.74
CDK5RAP3-202ENST00000536708 ACTL10Q5JWF8 245 aa10.45□□□□□ -0.74
CDK5RAP3-202ENST00000536708 Q5PR19 223 aa10.45□□□□□ -0.74
CDK5RAP3-202ENST00000536708 KRTAP1-3Q8IUG1 177 aa10.45□□□□□ -0.74
CDK5RAP3-202ENST00000536708 MGST2Q99735 147 aa10.45□□□□□ -0.74
CDK5RAP3-202ENST00000536708 GGTLC1Q9BX51 225 aa10.45□□□□□ -0.74
CDK5RAP3-202ENST00000536708 NPVFQ9HCQ7 196 aa10.45□□□□□ -0.74
CDK5RAP3-202ENST00000536708 ZFHX3Q15911 3703 aa10.45□□□□□ -0.74
CDK5RAP3-202ENST00000536708 FLNBO75369 2602 aaKnown RBP10.45□□□□□ -0.74
CDK5RAP3-202ENST00000536708 SAA2-SAA4A0A096LPE2 208 aa10.45□□□□□ -0.74
CDK5RAP3-202ENST00000536708 A0A1W2PPV4 95 aa10.45□□□□□ -0.74
CDK5RAP3-202ENST00000536708 PPP5D1E7EU14 171 aa10.45□□□□□ -0.74
CDK5RAP3-202ENST00000536708 F6UZH7 168 aa10.45□□□□□ -0.74
CDK5RAP3-202ENST00000536708 LIPFP07098 398 aa10.45□□□□□ -0.74
CDK5RAP3-202ENST00000536708 STAG3L2P0CL84 134 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms