RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 PDCL2Q8N4E4 241 aa-0.87□□□□□ -2.55
COPB1-212ENST00000534771 GPR32P1Q8NGA4 272 aa-0.87□□□□□ -2.55
COPB1-212ENST00000534771 OR2Y1Q8NGV0 311 aa-0.87□□□□□ -2.55
COPB1-212ENST00000534771 RASSF5Q8WWW0 418 aa-0.87□□□□□ -2.55
COPB1-212ENST00000534771 SMIM12Q96EX1 92 aa-0.87□□□□□ -2.55
COPB1-212ENST00000534771 LINC00052Q96N35 136 aa-0.87□□□□□ -2.55
COPB1-212ENST00000534771 SCGB3A1Q96QR1 104 aa-0.87□□□□□ -2.55
COPB1-212ENST00000534771 GINS4Q9BRT9 223 aa-0.87□□□□□ -2.55
COPB1-212ENST00000534771 SLC22A4Q9H015 551 aa-0.87□□□□□ -2.55
COPB1-212ENST00000534771 MIXL1Q9H2W2 232 aa-0.87□□□□□ -2.55
COPB1-212ENST00000534771 FBXO44Q9H4M3 255 aa-0.87□□□□□ -2.55
COPB1-212ENST00000534771 RGCCQ9H4X1 137 aa-0.87□□□□□ -2.55
COPB1-212ENST00000534771 PARVAQ9NVD7 372 aa-0.87□□□□□ -2.55
COPB1-212ENST00000534771 STMN3Q9NZ72 180 aa-0.87□□□□□ -2.55
COPB1-212ENST00000534771 IL36BQ9NZH7 164 aa-0.87□□□□□ -2.55
COPB1-212ENST00000534771 SNX24Q9Y343 169 aa-0.87□□□□□ -2.55
COPB1-212ENST00000534771 CECR2Q9BXF3 1484 aa-0.87□□□□□ -2.55
COPB1-212ENST00000534771 SCN3AQ9NY46 2000 aa-0.88□□□□□ -2.55
COPB1-212ENST00000534771 MYO3BQ8WXR4 1341 aa-0.88□□□□□ -2.55
COPB1-212ENST00000534771 TACC2O95359 2948 aa-0.88□□□□□ -2.55
COPB1-212ENST00000534771 ANK3Q12955 4377 aaKnown RBP-0.88□□□□□ -2.55
COPB1-212ENST00000534771 SVEP1Q4LDE5 3571 aa-0.88□□□□□ -2.55
COPB1-212ENST00000534771 CHD9Q3L8U1 2897 aa-0.88□□□□□ -2.55
COPB1-212ENST00000534771 PLECQ15149 4684 aaKnown RBP-0.88□□□□□ -2.55
COPB1-212ENST00000534771 SYNJ2BP-COX16A0A087WUM0 186 aa-0.88□□□□□ -2.55
COPB1-212ENST00000534771 A0A0D9SG52 128 aa-0.88□□□□□ -2.55
COPB1-212ENST00000534771 METTL15A6NJ78 407 aa-0.88□□□□□ -2.55
COPB1-212ENST00000534771 F5H5K5 113 aa-0.88□□□□□ -2.55
COPB1-212ENST00000534771 OR2B3O76000 313 aa-0.88□□□□□ -2.55
COPB1-212ENST00000534771 MBP02144 154 aa-0.88□□□□□ -2.55
COPB1-212ENST00000534771 GP1BAP07359 652 aa-0.88□□□□□ -2.55
COPB1-212ENST00000534771 LINC00614P0C842 121 aa-0.88□□□□□ -2.55
COPB1-212ENST00000534771 FAM228BP0C875 321 aa-0.88□□□□□ -2.55
COPB1-212ENST00000534771 RNASE4P34096 147 aaKnown RBP-0.88□□□□□ -2.55
COPB1-212ENST00000534771 SERPINB9P50453 376 aa-0.88□□□□□ -2.55
COPB1-212ENST00000534771 PSMD7P51665 324 aa-0.88□□□□□ -2.55
COPB1-212ENST00000534771 HPCAP84074 193 aa-0.88□□□□□ -2.55
COPB1-212ENST00000534771 FLOT2Q14254 428 aa-0.88□□□□□ -2.55
COPB1-212ENST00000534771 EBPQ15125 230 aaKnown RBP-0.88□□□□□ -2.55
COPB1-212ENST00000534771 KISS1Q15726 138 aa-0.88□□□□□ -2.55
COPB1-212ENST00000534771 KHDC3LQ587J8 217 aa-0.88□□□□□ -2.55
COPB1-212ENST00000534771 HSP90AA4PQ58FG1 418 aa-0.88□□□□□ -2.55
COPB1-212ENST00000534771 DPPA3Q6W0C5 159 aa-0.88□□□□□ -2.55
COPB1-212ENST00000534771 OR2T4Q8NH00 348 aa-0.88□□□□□ -2.55
COPB1-212ENST00000534771 PFN4Q8NHR9 129 aa-0.88□□□□□ -2.55
COPB1-212ENST00000534771 CCDC12Q8WUD4 166 aaPredicted RBP-0.88□□□□□ -2.55
COPB1-212ENST00000534771 ANKRD36BP1Q96IX9 119 aa-0.88□□□□□ -2.55
COPB1-212ENST00000534771 MED10Q9BTT4 135 aa-0.88□□□□□ -2.55
COPB1-212ENST00000534771 BBS2Q9BXC9 721 aa-0.88□□□□□ -2.55
COPB1-212ENST00000534771 WFDC10AQ9H1F0 79 aa-0.88□□□□□ -2.55
COPB1-212ENST00000534771 HRASLSQ9HDD0 168 aa-0.88□□□□□ -2.55
COPB1-212ENST00000534771 PAQR5Q9NXK6 330 aaPredicted RBP-0.88□□□□□ -2.55
COPB1-212ENST00000534771 TAS2R7Q9NYW3 318 aa-0.88□□□□□ -2.55
COPB1-212ENST00000534771 AK3Q9UIJ7 227 aa-0.88□□□□□ -2.55
COPB1-212ENST00000534771 COQ4Q9Y3A0 265 aa-0.88□□□□□ -2.55
COPB1-212ENST00000534771 KIAA0232Q92628 1395 aa-0.88□□□□□ -2.55
COPB1-212ENST00000534771 KDM6AO15550 1401 aaPredicted RBP-0.89□□□□□ -2.55
COPB1-212ENST00000534771 FANCMQ8IYD8 2048 aa-0.89□□□□□ -2.55
COPB1-212ENST00000534771 ITPR2Q14571 2701 aa-0.89□□□□□ -2.55
COPB1-212ENST00000534771 C1orf232A0A0U1RR37 186 aa-0.89□□□□□ -2.55
COPB1-212ENST00000534771 A0A1W2PPV4 95 aa-0.89□□□□□ -2.55
COPB1-212ENST00000534771 C5orf49A4QMS7 147 aa-0.89□□□□□ -2.55
COPB1-212ENST00000534771 CCDC169A6NNP5 214 aa-0.89□□□□□ -2.55
COPB1-212ENST00000534771 LST1O00453 97 aa-0.89□□□□□ -2.55
COPB1-212ENST00000534771 SNX4O95219 450 aa-0.89□□□□□ -2.55
COPB1-212ENST00000534771 AHSA1O95433 338 aa-0.89□□□□□ -2.55
COPB1-212ENST00000534771 CD2P06729 351 aa-0.89□□□□□ -2.55
COPB1-212ENST00000534771 SRP19P09132 144 aaKnown RBP-0.89□□□□□ -2.55
COPB1-212ENST00000534771 MIPP30301 263 aa-0.89□□□□□ -2.55
COPB1-212ENST00000534771 CASQ1P31415 396 aa-0.89□□□□□ -2.55
COPB1-212ENST00000534771 RPL37P61927 97 aaKnown RBP-0.89□□□□□ -2.55
COPB1-212ENST00000534771 TNFAIP8L3Q5GJ75 292 aa-0.89□□□□□ -2.55
COPB1-212ENST00000534771 AHSA2Q719I0 299 aa-0.89□□□□□ -2.55
COPB1-212ENST00000534771 LINC00523Q86TU6 105 aa-0.89□□□□□ -2.55
COPB1-212ENST00000534771 Q8N402 240 aa-0.89□□□□□ -2.55
COPB1-212ENST00000534771 LINC00301Q8NCQ3 95 aa-0.89□□□□□ -2.55
COPB1-212ENST00000534771 ST6GALNAC3Q8NDV1 305 aa-0.89□□□□□ -2.55
COPB1-212ENST00000534771 MCFD2Q8NI22 146 aa-0.89□□□□□ -2.55
COPB1-212ENST00000534771 TEX47Q8TBZ9 253 aa-0.89□□□□□ -2.55
COPB1-212ENST00000534771 CCL19Q99731 98 aa-0.89□□□□□ -2.55
COPB1-212ENST00000534771 LPAR5Q9H1C0 372 aa-0.89□□□□□ -2.55
COPB1-212ENST00000534771 GPR84Q9NQS5 396 aa-0.89□□□□□ -2.55
COPB1-212ENST00000534771 CLEC2DQ9UHP7 191 aa-0.89□□□□□ -2.55
COPB1-212ENST00000534771 MGAMO43451 1857 aa-0.89□□□□□ -2.55
COPB1-212ENST00000534771 AHCTF1Q8WYP5 2266 aa-0.89□□□□□ -2.55
COPB1-212ENST00000534771 TAF1LQ8IZX4 1826 aa-0.89□□□□□ -2.55
COPB1-212ENST00000534771 MAP1BP46821 2468 aaKnown RBP-0.9□□□□□ -2.55
COPB1-212ENST00000534771 SCN10AQ9Y5Y9 1956 aa-0.9□□□□□ -2.55
COPB1-212ENST00000534771 UNC13BO14795 1591 aa-0.9□□□□□ -2.55
COPB1-212ENST00000534771 A0A1W2PP64 1363 aa-0.9□□□□□ -2.55
COPB1-212ENST00000534771 LRPPRCP42704 1394 aaKnown RBP-0.9□□□□□ -2.55
COPB1-212ENST00000534771 TRAV3A0A0B4J244 114 aa-0.9□□□□□ -2.55
COPB1-212ENST00000534771 A0A1B0GTQ1 180 aa-0.9□□□□□ -2.55
COPB1-212ENST00000534771 INMT-MINDY4F8WBC2 141 aa-0.9□□□□□ -2.55
COPB1-212ENST00000534771 H3BRM9 83 aa-0.9□□□□□ -2.55
COPB1-212ENST00000534771 SGCEO43556 437 aa-0.9□□□□□ -2.55
COPB1-212ENST00000534771 PPYP01298 95 aa-0.9□□□□□ -2.55
COPB1-212ENST00000534771 PRM2P04554 102 aa-0.9□□□□□ -2.55
COPB1-212ENST00000534771 LIMS3P0CW19 117 aa-0.9□□□□□ -2.55
COPB1-212ENST00000534771 LIMS4P0CW20 117 aa-0.9□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms