RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 RPL38P63173 70 aaKnown RBP2.49□□□□□ -2.01
USP48-215ENST00000534705 FAM3AP98173 230 aa2.49□□□□□ -2.01
USP48-215ENST00000534705 TFF3Q07654 80 aa2.49□□□□□ -2.01
USP48-215ENST00000534705 MADCAM1Q13477 382 aa2.49□□□□□ -2.01
USP48-215ENST00000534705 INSL4Q14641 139 aa2.49□□□□□ -2.01
USP48-215ENST00000534705 CLINT1Q14677 625 aa2.49□□□□□ -2.01
USP48-215ENST00000534705 NNATQ16517 81 aa2.49□□□□□ -2.01
USP48-215ENST00000534705 IQCJQ1A5X6 159 aa2.49□□□□□ -2.01
USP48-215ENST00000534705 OCIAD2Q56VL3 154 aa2.49□□□□□ -2.01
USP48-215ENST00000534705 COL5A1-AS1Q5SY13 56 aa2.49□□□□□ -2.01
USP48-215ENST00000534705 PRSS54Q6PEW0 395 aa2.49□□□□□ -2.01
USP48-215ENST00000534705 ASCL4Q6XD76 172 aa2.49□□□□□ -2.01
USP48-215ENST00000534705 ADAMTSL5Q6ZMM2 481 aa2.49□□□□□ -2.01
USP48-215ENST00000534705 ABHD12BQ7Z5M8 362 aaPredicted RBP2.49□□□□□ -2.01
USP48-215ENST00000534705 ZNF100Q8IYN0 542 aa2.49□□□□□ -2.01
USP48-215ENST00000534705 SELENOHQ8IZQ5 122 aaKnown RBP2.49□□□□□ -2.01
USP48-215ENST00000534705 SLC35G3Q8N808 338 aa2.49□□□□□ -2.01
USP48-215ENST00000534705 COX18Q8N8Q8 333 aa2.49□□□□□ -2.01
USP48-215ENST00000534705 NECAP1Q8NC96 275 aa2.49□□□□□ -2.01
USP48-215ENST00000534705 OR5D16Q8NGK9 328 aa2.49□□□□□ -2.01
USP48-215ENST00000534705 OR4C16Q8NGL9 310 aa2.49□□□□□ -2.01
USP48-215ENST00000534705 OR6N2Q8NGY6 317 aa2.49□□□□□ -2.01
USP48-215ENST00000534705 OR1P1Q8NH06 330 aa2.49□□□□□ -2.01
USP48-215ENST00000534705 OR4S2Q8NH73 311 aa2.49□□□□□ -2.01
USP48-215ENST00000534705 FAM57AQ8TBR7 257 aa2.49□□□□□ -2.01
USP48-215ENST00000534705 PPP1R1CQ8WVI7 109 aa2.49□□□□□ -2.01
USP48-215ENST00000534705 GTSF1Q8WW33 167 aa2.49□□□□□ -2.01
USP48-215ENST00000534705 TMEM106AQ96A25 262 aa2.49□□□□□ -2.01
USP48-215ENST00000534705 APH1AQ96BI3 265 aa2.49□□□□□ -2.01
USP48-215ENST00000534705 GPR146Q96CH1 333 aa2.49□□□□□ -2.01
USP48-215ENST00000534705 TSSK3Q96PN8 268 aa2.49□□□□□ -2.01
USP48-215ENST00000534705 MICU1Q9BPX6 476 aa2.49□□□□□ -2.01
USP48-215ENST00000534705 ZNF471Q9BX82 626 aaPredicted RBP2.49□□□□□ -2.01
USP48-215ENST00000534705 MAP1LC3CQ9BXW4 147 aa2.49□□□□□ -2.01
USP48-215ENST00000534705 NMES1Q9C002 83 aa2.49□□□□□ -2.01
USP48-215ENST00000534705 DEFB127Q9H1M4 99 aa2.49□□□□□ -2.01
USP48-215ENST00000534705 ATG5Q9H1Y0 275 aa2.49□□□□□ -2.01
USP48-215ENST00000534705 OR2S2Q9NQN1 319 aa2.49□□□□□ -2.01
USP48-215ENST00000534705 CBLN4Q9NTU7 201 aa2.49□□□□□ -2.01
USP48-215ENST00000534705 TAS2R8Q9NYW2 309 aa2.49□□□□□ -2.01
USP48-215ENST00000534705 OR5AC2Q9NZP5 309 aa2.49□□□□□ -2.01
USP48-215ENST00000534705 SPRR3Q9UBC9 169 aa2.49□□□□□ -2.01
USP48-215ENST00000534705 SLC7A11Q9UPY5 501 aa2.49□□□□□ -2.01
USP48-215ENST00000534705 KCNE3Q9Y6H6 103 aa2.49□□□□□ -2.01
USP48-215ENST00000534705 HIVEP1P15822 2718 aa2.49□□□□□ -2.01
USP48-215ENST00000534705 CCDC168Q8NDH2 2452 aa2.49□□□□□ -2.01
USP48-215ENST00000534705 ZANQ9Y493 2812 aa2.49□□□□□ -2.01
USP48-215ENST00000534705 F8P00451 2351 aa2.49□□□□□ -2.01
USP48-215ENST00000534705 MALRD1Q5VYJ5 2156 aa2.49□□□□□ -2.01
USP48-215ENST00000534705 ZFHX3Q15911 3703 aa2.48□□□□□ -2.01
USP48-215ENST00000534705 FLNAP21333 2647 aaKnown RBP2.48□□□□□ -2.01
USP48-215ENST00000534705 ACANP16112 2415 aa2.48□□□□□ -2.01
USP48-215ENST00000534705 IGHV3OR16-12A0A075B7B8 117 aa2.48□□□□□ -2.01
USP48-215ENST00000534705 IGLV3-32A0A0A0MS00 114 aa2.48□□□□□ -2.01
USP48-215ENST00000534705 A0A1B0GW15 77 aa2.48□□□□□ -2.01
USP48-215ENST00000534705 C20orf202A1L168 122 aa2.48□□□□□ -2.01
USP48-215ENST00000534705 TMEM213A2RRL7 107 aa2.48□□□□□ -2.01
USP48-215ENST00000534705 DHRS7CA6NNS2 312 aa2.48□□□□□ -2.01
USP48-215ENST00000534705 B4DEV8 164 aa2.48□□□□□ -2.01
USP48-215ENST00000534705 CCL21O00585 134 aa2.48□□□□□ -2.01
USP48-215ENST00000534705 FCN1O00602 326 aa2.48□□□□□ -2.01
USP48-215ENST00000534705 BHLHE40O14503 412 aa2.48□□□□□ -2.01
USP48-215ENST00000534705 HSD17B6O14756 317 aa2.48□□□□□ -2.01
USP48-215ENST00000534705 TSPAN13O95857 204 aa2.48□□□□□ -2.01
USP48-215ENST00000534705 CYB5R3P00387 301 aaPredicted RBP2.48□□□□□ -2.01
USP48-215ENST00000534705 TRGC2P03986 189 aa2.48□□□□□ -2.01
USP48-215ENST00000534705 ARG1P05089 322 aa2.48□□□□□ -2.01
USP48-215ENST00000534705 CST2P09228 141 aa2.48□□□□□ -2.01
USP48-215ENST00000534705 OR4A8P0C604 315 aa2.48□□□□□ -2.01
USP48-215ENST00000534705 SEC11BP0C7V7 166 aa2.48□□□□□ -2.01
USP48-215ENST00000534705 PGA3P0DJD8 388 aa2.48□□□□□ -2.01
USP48-215ENST00000534705 FABP4P15090 132 aa2.48□□□□□ -2.01
USP48-215ENST00000534705 GZMHP20718 246 aa2.48□□□□□ -2.01
USP48-215ENST00000534705 CXCR1P25024 350 aa2.48□□□□□ -2.01
USP48-215ENST00000534705 GDF1P27539 372 aa2.48□□□□□ -2.01
USP48-215ENST00000534705 GNRHRP30968 328 aa2.48□□□□□ -2.01
USP48-215ENST00000534705 FAUP35544 74 aaKnown RBP2.48□□□□□ -2.01
USP48-215ENST00000534705 RPS10P46783 165 aaKnown RBP2.48□□□□□ -2.01
USP48-215ENST00000534705 LGALS7P47929 136 aa2.48□□□□□ -2.01
USP48-215ENST00000534705 RAB7AP51149 207 aa2.48□□□□□ -2.01
USP48-215ENST00000534705 NCBP2P52298 156 aaKnown RBP eCLIP2.48□□□□□ -2.01
USP48-215ENST00000534705 SLC25A1P53007 311 aa2.48□□□□□ -2.01
USP48-215ENST00000534705 MFAP2P55001 183 aa2.48□□□□□ -2.01
USP48-215ENST00000534705 SMIM11AP58511 58 aa2.48□□□□□ -2.01
USP48-215ENST00000534705 RANP62826 216 aaKnown RBP2.48□□□□□ -2.01
USP48-215ENST00000534705 FUT5Q11128 374 aa2.48□□□□□ -2.01
USP48-215ENST00000534705 GINS1Q14691 196 aa2.48□□□□□ -2.01
USP48-215ENST00000534705 TAF9Q16594 264 aa2.48□□□□□ -2.01
USP48-215ENST00000534705 TIGITQ495A1 244 aa2.48□□□□□ -2.01
USP48-215ENST00000534705 OR2T2Q6IF00 324 aa2.48□□□□□ -2.01
USP48-215ENST00000534705 ZNF836Q6ZNA1 936 aa2.48□□□□□ -2.01
USP48-215ENST00000534705 Q6ZSR3 168 aa2.48□□□□□ -2.01
USP48-215ENST00000534705 SSX7Q7RTT5 188 aa2.48□□□□□ -2.01
USP48-215ENST00000534705 LYG2Q86SG7 212 aa2.48□□□□□ -2.01
USP48-215ENST00000534705 TGIF2LYQ8IUE0 185 aa2.48□□□□□ -2.01
USP48-215ENST00000534705 CLECL1Q8IZS7 167 aa2.48□□□□□ -2.01
USP48-215ENST00000534705 ZNF525Q8N782 197 aa2.48□□□□□ -2.01
USP48-215ENST00000534705 Q8N7P7 452 aa2.48□□□□□ -2.01
USP48-215ENST00000534705 LFNGQ8NES3 379 aa2.48□□□□□ -2.01
USP48-215ENST00000534705 OR2T33Q8NG76 320 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms