RNA–Protein interactions for RNA: ENST00000534581.1

C11orf49-222, Transcript of chromosome 11 open reading frame 49, human

TSL 3

Gene C11orf49, Length 542 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C11orf49-222	ENST00000534581	SSSCA1	O60232	199 aa		13.21	□□□□□ -0.29
C11orf49-222	ENST00000534581	SIX6	O95475	246 aa		13.21	□□□□□ -0.29
C11orf49-222	ENST00000534581	MFAP2	P55001	183 aa		13.21	□□□□□ -0.29
C11orf49-222	ENST00000534581	POLR2G	P62487	172 aa	Known RBP eCLIP	13.21	□□□□□ -0.29
C11orf49-222	ENST00000534581	RPP30	P78346	268 aa	Known RBP	13.21	□□□□□ -0.29
C11orf49-222	ENST00000534581	C11orf87	Q6NUJ2	197 aa		13.21	□□□□□ -0.29
C11orf49-222	ENST00000534581	NOXA1	Q86UR1	476 aa		13.21	□□□□□ -0.29
C11orf49-222	ENST00000534581	RAX2	Q96IS3	184 aa		13.21	□□□□□ -0.29
C11orf49-222	ENST00000534581	MGAT4C	Q9UBM8	478 aa		13.21	□□□□□ -0.29
C11orf49-222	ENST00000534581		U3KQ87	197 aa		13.21	□□□□□ -0.29
C11orf49-222	ENST00000534581	TENM1	Q9UKZ4	2725 aa		13.2	□□□□□ -0.3
C11orf49-222	ENST00000534581	C7orf66	A4D0T2	115 aa		13.2	□□□□□ -0.3
C11orf49-222	ENST00000534581	NPY1R	P25929	384 aa		13.2	□□□□□ -0.3
C11orf49-222	ENST00000534581	MYCNOS	P40205	109 aa		13.2	□□□□□ -0.3
C11orf49-222	ENST00000534581	S100A10	P60903	97 aa		13.2	□□□□□ -0.3
C11orf49-222	ENST00000534581	ID3	Q02535	119 aa		13.2	□□□□□ -0.3
C11orf49-222	ENST00000534581	PEF1	Q9UBV8	284 aa	Known RBP	13.2	□□□□□ -0.3
C11orf49-222	ENST00000534581	LSM5	Q9Y4Y9	91 aa	Known RBP	13.2	□□□□□ -0.3
C11orf49-222	ENST00000534581	STAB1	Q9NY15	2570 aa		13.2	□□□□□ -0.3
C11orf49-222	ENST00000534581	TRBV7-1	A0A0A6YYK4	115 aa		13.19	□□□□□ -0.3
C11orf49-222	ENST00000534581	MFSD2B	A6NFX1	497 aa		13.19	□□□□□ -0.3
C11orf49-222	ENST00000534581	LINC01619	G3V211	115 aa		13.19	□□□□□ -0.3
C11orf49-222	ENST00000534581	CORT	O00230	105 aa		13.19	□□□□□ -0.3
C11orf49-222	ENST00000534581	MT-CO2	P00403	227 aa		13.19	□□□□□ -0.3
C11orf49-222	ENST00000534581	HSPB1	P04792	205 aa	Known RBP	13.19	□□□□□ -0.3
C11orf49-222	ENST00000534581	IFNA4	P05014	189 aa		13.19	□□□□□ -0.3
C11orf49-222	ENST00000534581	OPRK1	P41145	380 aa		13.19	□□□□□ -0.3
C11orf49-222	ENST00000534581	RUNX1	Q01196	453 aa		13.19	□□□□□ -0.3
C11orf49-222	ENST00000534581	ZNF616	Q08AN1	781 aa		13.19	□□□□□ -0.3
C11orf49-222	ENST00000534581	KLK9	Q2XQG4	91 aa		13.19	□□□□□ -0.3
C11orf49-222	ENST00000534581	C2orf83	Q53S99	150 aa		13.19	□□□□□ -0.3
C11orf49-222	ENST00000534581	ZNF343	Q6P1L6	599 aa		13.19	□□□□□ -0.3
C11orf49-222	ENST00000534581	UBAC2	Q8NBM4	344 aa		13.19	□□□□□ -0.3
C11orf49-222	ENST00000534581	VN1R17P	Q8TDU5	208 aa		13.19	□□□□□ -0.3
C11orf49-222	ENST00000534581	MED28	Q9H204	178 aa		13.19	□□□□□ -0.3
C11orf49-222	ENST00000534581	RANGRF	Q9HD47	186 aa	Predicted RBP	13.19	□□□□□ -0.3
C11orf49-222	ENST00000534581	KLK9	Q9UKQ9	250 aa		13.19	□□□□□ -0.3
C11orf49-222	ENST00000534581	IGHV4OR15-8	A0A075B7B6	117 aa		13.18	□□□□□ -0.3
C11orf49-222	ENST00000534581		A0A087WW49	117 aa		13.18	□□□□□ -0.3
C11orf49-222	ENST00000534581		L7N2F9	121 aa		13.18	□□□□□ -0.3
C11orf49-222	ENST00000534581	LY86	O95711	162 aa		13.18	□□□□□ -0.3
C11orf49-222	ENST00000534581	MBP	P02686	304 aa	Predicted RBP	13.18	□□□□□ -0.3
C11orf49-222	ENST00000534581	OR8U8	P0C7N1	319 aa		13.18	□□□□□ -0.3
C11orf49-222	ENST00000534581	RAB11A	P62491	216 aa		13.18	□□□□□ -0.3
C11orf49-222	ENST00000534581	VAMP2	P63027	116 aa		13.18	□□□□□ -0.3
C11orf49-222	ENST00000534581		Q56UQ5	140 aa		13.18	□□□□□ -0.3
C11orf49-222	ENST00000534581	FAM209B	Q5JX69	171 aa		13.18	□□□□□ -0.3
C11orf49-222	ENST00000534581	SPANXN5	Q5MJ07	72 aa		13.18	□□□□□ -0.3
C11orf49-222	ENST00000534581	CLEC19A	Q6UXS0	136 aa		13.18	□□□□□ -0.3
C11orf49-222	ENST00000534581	C21orf62	Q9NYP8	219 aa		13.18	□□□□□ -0.3
C11orf49-222	ENST00000534581	PSENEN	Q9NZ42	101 aa		13.18	□□□□□ -0.3
C11orf49-222	ENST00000534581	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	13.17	□□□□□ -0.3
C11orf49-222	ENST00000534581	RPS10-NUDT3	A0A1W2PQS6	291 aa		13.17	□□□□□ -0.3
C11orf49-222	ENST00000534581		H3BP45	60 aa		13.17	□□□□□ -0.3
C11orf49-222	ENST00000534581		K7EIM0	57 aa		13.17	□□□□□ -0.3
C11orf49-222	ENST00000534581	TRBV12-3	P01733	135 aa		13.17	□□□□□ -0.3
C11orf49-222	ENST00000534581	IGHV3-48	P01763	117 aa		13.17	□□□□□ -0.3
C11orf49-222	ENST00000534581	CLEC3B	P05452	202 aa		13.17	□□□□□ -0.3
C11orf49-222	ENST00000534581	CYCS	P99999	105 aa	Known RBP	13.17	□□□□□ -0.3
C11orf49-222	ENST00000534581	BSX	Q3C1V8	233 aa		13.17	□□□□□ -0.3
C11orf49-222	ENST00000534581	ETV3L	Q6ZN32	361 aa		13.17	□□□□□ -0.3
C11orf49-222	ENST00000534581	SCARB1	Q8WTV0	552 aa		13.17	□□□□□ -0.3
C11orf49-222	ENST00000534581	ZC4H2	Q9NQZ6	224 aa		13.17	□□□□□ -0.3
C11orf49-222	ENST00000534581	RCL1	Q9Y2P8	373 aa	Known RBP	13.17	□□□□□ -0.3
C11orf49-222	ENST00000534581	STRAP	Q9Y3F4	350 aa	Known RBP	13.17	□□□□□ -0.3
C11orf49-222	ENST00000534581	TET2	Q6N021	2002 aa	Predicted RBP	13.17	□□□□□ -0.3
C11orf49-222	ENST00000534581	PPP5D1	E7EU14	171 aa		13.16	□□□□□ -0.3
C11orf49-222	ENST00000534581		I3L2K1	104 aa		13.16	□□□□□ -0.3
C11orf49-222	ENST00000534581	PVALB	P20472	110 aa	Predicted RBP	13.16	□□□□□ -0.3
C11orf49-222	ENST00000534581	GPR183	P32249	361 aa		13.16	□□□□□ -0.3
C11orf49-222	ENST00000534581	ARL3	P36405	182 aa		13.16	□□□□□ -0.3
C11orf49-222	ENST00000534581	MFAP4	P55083	255 aa		13.16	□□□□□ -0.3
C11orf49-222	ENST00000534581	ATP5I	P56385	69 aa	Predicted RBP	13.16	□□□□□ -0.3
C11orf49-222	ENST00000534581	ACSM6	Q6P461	480 aa		13.16	□□□□□ -0.3
C11orf49-222	ENST00000534581	ZNF502	Q8TBZ5	544 aa		13.16	□□□□□ -0.3
C11orf49-222	ENST00000534581	RNASEH2C	Q8TDP1	164 aa	Known RBP	13.16	□□□□□ -0.3
C11orf49-222	ENST00000534581	CCDC140	Q96MF4	163 aa		13.16	□□□□□ -0.3
C11orf49-222	ENST00000534581	RAB40C	Q96S21	281 aa		13.16	□□□□□ -0.3
C11orf49-222	ENST00000534581	OR2T8	A6NH00	312 aa		13.15	□□□□□ -0.3
C11orf49-222	ENST00000534581		K7EPK0	472 aa		13.15	□□□□□ -0.3
C11orf49-222	ENST00000534581	CD33	P20138	364 aa		13.15	□□□□□ -0.3
C11orf49-222	ENST00000534581	ZP3	P21754	424 aa		13.15	□□□□□ -0.3
C11orf49-222	ENST00000534581	BCAP31	P51572	246 aa		13.15	□□□□□ -0.3
C11orf49-222	ENST00000534581	SLURP1	P55000	103 aa		13.15	□□□□□ -0.3
C11orf49-222	ENST00000534581	RPEL1	Q2QD12	228 aa		13.15	□□□□□ -0.3
C11orf49-222	ENST00000534581	LRRC37A5P	Q49AS3	106 aa		13.15	□□□□□ -0.3
C11orf49-222	ENST00000534581	PRR31	Q5SQ13	230 aa		13.15	□□□□□ -0.3
C11orf49-222	ENST00000534581	ETFRF1	Q6IPR1	90 aa		13.15	□□□□□ -0.3
C11orf49-222	ENST00000534581	TREML4	Q6UXN2	200 aa		13.15	□□□□□ -0.3
C11orf49-222	ENST00000534581	SMIM8	Q96KF7	97 aa		13.15	□□□□□ -0.3
C11orf49-222	ENST00000534581	NMES1	Q9C002	83 aa		13.15	□□□□□ -0.3
C11orf49-222	ENST00000534581	RLN2	P04090	185 aa		13.14	□□□□□ -0.31
C11orf49-222	ENST00000534581	HOXD3	P31249	432 aa	Predicted RBP	13.14	□□□□□ -0.31
C11orf49-222	ENST00000534581	NPBWR1	P48145	328 aa		13.14	□□□□□ -0.31
C11orf49-222	ENST00000534581	H2BFS	P57053	126 aa		13.14	□□□□□ -0.31
C11orf49-222	ENST00000534581	RAB32	Q13637	225 aa		13.14	□□□□□ -0.31
C11orf49-222	ENST00000534581	FCN2	Q15485	313 aa		13.14	□□□□□ -0.31
C11orf49-222	ENST00000534581	MLANA	Q16655	118 aa		13.14	□□□□□ -0.31
C11orf49-222	ENST00000534581	PVRIG	Q6DKI7	326 aa		13.14	□□□□□ -0.31
C11orf49-222	ENST00000534581	TMEM170A	Q8WVE7	144 aa		13.14	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms