RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	C1QB	P02746	253 aa		2.7	□□□□□ -1.98
ECHDC1-223	ENST00000534442	CDK2	P24941	298 aa		2.7	□□□□□ -1.98
ECHDC1-223	ENST00000534442	NPY1R	P25929	384 aa		2.7	□□□□□ -1.98
ECHDC1-223	ENST00000534442	CD40LG	P29965	261 aa		2.7	□□□□□ -1.98
ECHDC1-223	ENST00000534442	LINC00315	P59091	139 aa		2.7	□□□□□ -1.98
ECHDC1-223	ENST00000534442	TPPP2	P59282	170 aa		2.7	□□□□□ -1.98
ECHDC1-223	ENST00000534442	NCALD	P61601	193 aa		2.7	□□□□□ -1.98
ECHDC1-223	ENST00000534442	MT1H	P80294	61 aa		2.7	□□□□□ -1.98
ECHDC1-223	ENST00000534442	ERCC8	Q13216	396 aa		2.7	□□□□□ -1.98
ECHDC1-223	ENST00000534442	ZNF266	Q14584	549 aa		2.7	□□□□□ -1.98
ECHDC1-223	ENST00000534442	C12orf74	Q32Q52	190 aa		2.7	□□□□□ -1.98
ECHDC1-223	ENST00000534442	HEPN1	Q6WQI6	88 aa		2.7	□□□□□ -1.98
ECHDC1-223	ENST00000534442	VTCN1	Q7Z7D3	282 aa		2.7	□□□□□ -1.98
ECHDC1-223	ENST00000534442	NAA40	Q86UY6	237 aa		2.7	□□□□□ -1.98
ECHDC1-223	ENST00000534442	VKORC1L1	Q8N0U8	176 aa		2.7	□□□□□ -1.98
ECHDC1-223	ENST00000534442	ASCC1	Q8N9N2	400 aa	Known RBP	2.7	□□□□□ -1.98
ECHDC1-223	ENST00000534442	UQCC2	Q9BRT2	126 aa		2.7	□□□□□ -1.98
ECHDC1-223	ENST00000534442	NAA50	Q9GZZ1	169 aa	Known RBP	2.7	□□□□□ -1.98
ECHDC1-223	ENST00000534442	GAL3ST2	Q9H3Q3	398 aa		2.7	□□□□□ -1.98
ECHDC1-223	ENST00000534442	ZNF286A	Q9HBT8	521 aa		2.7	□□□□□ -1.98
ECHDC1-223	ENST00000534442	PARP11	Q9NR21	331 aa		2.7	□□□□□ -1.98
ECHDC1-223	ENST00000534442	IFNK	Q9P0W0	207 aa		2.7	□□□□□ -1.98
ECHDC1-223	ENST00000534442	ENPP5	Q9UJA9	477 aa		2.7	□□□□□ -1.98
ECHDC1-223	ENST00000534442	POLR1D	Q9Y2S0	133 aa		2.7	□□□□□ -1.98
ECHDC1-223	ENST00000534442	SPRR5	A0A1B0GTR4	108 aa		2.69	□□□□□ -1.98
ECHDC1-223	ENST00000534442		A0A1W2PPV4	95 aa		2.69	□□□□□ -1.98
ECHDC1-223	ENST00000534442	TRAPPC13	A5PLN9	417 aa		2.69	□□□□□ -1.98
ECHDC1-223	ENST00000534442		H3BQF6	201 aa		2.69	□□□□□ -1.98
ECHDC1-223	ENST00000534442	TPM3	P06753	285 aa		2.69	□□□□□ -1.98
ECHDC1-223	ENST00000534442	MIF	P14174	115 aa		2.69	□□□□□ -1.98
ECHDC1-223	ENST00000534442	RAB3A	P20336	220 aa		2.69	□□□□□ -1.98
ECHDC1-223	ENST00000534442	KRTAP10-8	P60410	259 aa		2.69	□□□□□ -1.98
ECHDC1-223	ENST00000534442	RAP1A	P62834	184 aa		2.69	□□□□□ -1.98
ECHDC1-223	ENST00000534442	TPM4	P67936	248 aa		2.69	□□□□□ -1.98
ECHDC1-223	ENST00000534442	HIST1H3A	P68431	136 aa		2.69	□□□□□ -1.98
ECHDC1-223	ENST00000534442	DGCR6	Q14129	220 aa		2.69	□□□□□ -1.98
ECHDC1-223	ENST00000534442	OR1Q1	Q15612	314 aa		2.69	□□□□□ -1.98
ECHDC1-223	ENST00000534442	GLYATL3	Q5SZD4	288 aa		2.69	□□□□□ -1.98
ECHDC1-223	ENST00000534442	HIST2H3PS2	Q5TEC6	136 aa		2.69	□□□□□ -1.98
ECHDC1-223	ENST00000534442		Q6P435	159 aa		2.69	□□□□□ -1.98
ECHDC1-223	ENST00000534442	HIST2H3A	Q71DI3	136 aa		2.69	□□□□□ -1.98
ECHDC1-223	ENST00000534442	CBR4	Q8N4T8	237 aa		2.69	□□□□□ -1.98
ECHDC1-223	ENST00000534442	KRTCAP2	Q8N6L1	136 aa		2.69	□□□□□ -1.98
ECHDC1-223	ENST00000534442	ISOC2	Q96AB3	205 aa		2.69	□□□□□ -1.98
ECHDC1-223	ENST00000534442	CYYR1	Q96J86	154 aa		2.69	□□□□□ -1.98
ECHDC1-223	ENST00000534442	SPACA5	Q96QH8	159 aa		2.69	□□□□□ -1.98
ECHDC1-223	ENST00000534442	C6orf62	Q9GZU0	229 aa	Predicted RBP	2.69	□□□□□ -1.98
ECHDC1-223	ENST00000534442	ABCB9	Q9NP78	766 aa		2.69	□□□□□ -1.98
ECHDC1-223	ENST00000534442	IGHV3-72	A0A0B4J1Y9	119 aa		2.68	□□□□□ -1.98
ECHDC1-223	ENST00000534442		M0R135	149 aa		2.68	□□□□□ -1.98
ECHDC1-223	ENST00000534442	KPNA4	O00629	521 aa	Predicted RBP	2.68	□□□□□ -1.98
ECHDC1-223	ENST00000534442	SOCS1	O15524	211 aa		2.68	□□□□□ -1.98
ECHDC1-223	ENST00000534442	ZNF737	O75373	536 aa		2.68	□□□□□ -1.98
ECHDC1-223	ENST00000534442	TRGV3	P03979	118 aa		2.68	□□□□□ -1.98
ECHDC1-223	ENST00000534442	TMEM267	Q0VDI3	215 aa	Predicted RBP	2.68	□□□□□ -1.98
ECHDC1-223	ENST00000534442	DIAPH2-AS1	Q14236	149 aa		2.68	□□□□□ -1.98
ECHDC1-223	ENST00000534442	EDDM3A	Q14507	147 aa		2.68	□□□□□ -1.98
ECHDC1-223	ENST00000534442	SNCB	Q16143	134 aa		2.68	□□□□□ -1.98
ECHDC1-223	ENST00000534442	DEFB116	Q30KQ4	102 aa		2.68	□□□□□ -1.98
ECHDC1-223	ENST00000534442	ORMDL2	Q53FV1	153 aa		2.68	□□□□□ -1.98
ECHDC1-223	ENST00000534442	TTC33	Q6PID6	262 aa	Predicted RBP	2.68	□□□□□ -1.98
ECHDC1-223	ENST00000534442	TRAPPC6B	Q86SZ2	158 aa		2.68	□□□□□ -1.98
ECHDC1-223	ENST00000534442	CYP4Z1	Q86W10	505 aa		2.68	□□□□□ -1.98
ECHDC1-223	ENST00000534442	ANGPTL5	Q86XS5	388 aa		2.68	□□□□□ -1.98
ECHDC1-223	ENST00000534442	OR10W1	Q8NGF6	305 aa		2.68	□□□□□ -1.98
ECHDC1-223	ENST00000534442	HAVCR2	Q8TDQ0	301 aa		2.68	□□□□□ -1.98
ECHDC1-223	ENST00000534442	OR5P3	Q8WZ94	311 aa		2.68	□□□□□ -1.98
ECHDC1-223	ENST00000534442	RNF170	Q96K19	258 aa		2.68	□□□□□ -1.98
ECHDC1-223	ENST00000534442	SLC22A13	Q9Y226	551 aa		2.68	□□□□□ -1.98
ECHDC1-223	ENST00000534442	MPC1	Q9Y5U8	109 aa		2.68	□□□□□ -1.98
ECHDC1-223	ENST00000534442	LHFPL6	Q9Y693	200 aa		2.68	□□□□□ -1.98
ECHDC1-223	ENST00000534442	TRAV6	A0A075B6T7	132 aa		2.67	□□□□□ -1.98
ECHDC1-223	ENST00000534442	IGHV1-3	A0A0C4DH29	117 aa		2.67	□□□□□ -1.98
ECHDC1-223	ENST00000534442		A0A0J9YXV3	536 aa		2.67	□□□□□ -1.98
ECHDC1-223	ENST00000534442	C2orf70	A6NJV1	201 aa		2.67	□□□□□ -1.98
ECHDC1-223	ENST00000534442	ANKRD65	E5RJM6	399 aa		2.67	□□□□□ -1.98
ECHDC1-223	ENST00000534442	CHP2	O43745	196 aa		2.67	□□□□□ -1.98
ECHDC1-223	ENST00000534442	MPDU1	O75352	247 aa		2.67	□□□□□ -1.98
ECHDC1-223	ENST00000534442	HSBP1	O75506	76 aa		2.67	□□□□□ -1.98
ECHDC1-223	ENST00000534442	CPSF4	O95639	269 aa	Known RBP	2.67	□□□□□ -1.98
ECHDC1-223	ENST00000534442	HLA-DRB1	P01911	266 aa		2.67	□□□□□ -1.98
ECHDC1-223	ENST00000534442	MB	P02144	154 aa		2.67	□□□□□ -1.98
ECHDC1-223	ENST00000534442	TCP1	P17987	556 aa	Known RBP	2.67	□□□□□ -1.98
ECHDC1-223	ENST00000534442	PMCH	P20382	165 aa		2.67	□□□□□ -1.98
ECHDC1-223	ENST00000534442	BLVRB	P30043	206 aa	Predicted RBP	2.67	□□□□□ -1.98
ECHDC1-223	ENST00000534442	FAM3A	P98173	230 aa		2.67	□□□□□ -1.98
ECHDC1-223	ENST00000534442	ZNF816	Q0VGE8	651 aa	Predicted RBP	2.67	□□□□□ -1.98
ECHDC1-223	ENST00000534442	C5orf64	Q2M2E5	130 aa		2.67	□□□□□ -1.98
ECHDC1-223	ENST00000534442	ACTBL2	Q562R1	376 aa		2.67	□□□□□ -1.98
ECHDC1-223	ENST00000534442	FAHD1	Q6P587	224 aa		2.67	□□□□□ -1.98
ECHDC1-223	ENST00000534442	CD200R1L	Q6Q8B3	271 aa		2.67	□□□□□ -1.98
ECHDC1-223	ENST00000534442	DRAM2	Q6UX65	266 aa		2.67	□□□□□ -1.98
ECHDC1-223	ENST00000534442	C3orf62	Q6ZUJ4	267 aa		2.67	□□□□□ -1.98
ECHDC1-223	ENST00000534442	OR6V1	Q8N148	313 aa		2.67	□□□□□ -1.98
ECHDC1-223	ENST00000534442	TRIML2	Q8N7C3	387 aa		2.67	□□□□□ -1.98
ECHDC1-223	ENST00000534442	YIPF7	Q8N8F6	280 aa		2.67	□□□□□ -1.98
ECHDC1-223	ENST00000534442		Q8N9L7	120 aa		2.67	□□□□□ -1.98
ECHDC1-223	ENST00000534442	OR8J2	Q8NGG1	315 aa		2.67	□□□□□ -1.98
ECHDC1-223	ENST00000534442	OR8B12	Q8NGG6	310 aa		2.67	□□□□□ -1.98
ECHDC1-223	ENST00000534442	OR4D6	Q8NGJ1	314 aa		2.67	□□□□□ -1.98

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