RNA–Protein interactions for RNA: ENST00000534401.5

PKP3-211, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 756 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-211ENST00000534401 C8orf88P0DMB2 117 aa16.17■□□□□ 0.18
PKP3-211ENST00000534401 IL7P13232 177 aa16.17■□□□□ 0.18
PKP3-211ENST00000534401 ELLP55199 621 aaPredicted RBP16.17■□□□□ 0.18
PKP3-211ENST00000534401 RBMS2Q15434 407 aaKnown RBP16.17■□□□□ 0.18
PKP3-211ENST00000534401 SPINK9Q5DT21 86 aa16.17■□□□□ 0.18
PKP3-211ENST00000534401 PLET1Q6UQ28 207 aa16.17■□□□□ 0.18
PKP3-211ENST00000534401 LGI3Q8N145 548 aa16.17■□□□□ 0.18
PKP3-211ENST00000534401 Q8N1Y9 231 aa16.17■□□□□ 0.18
PKP3-211ENST00000534401 C7orf50Q9BRJ6 194 aaKnown RBP16.17■□□□□ 0.18
PKP3-211ENST00000534401 PRR13Q9NZ81 148 aa16.17■□□□□ 0.18
PKP3-211ENST00000534401 CACNG5Q9UF02 275 aa16.17■□□□□ 0.18
PKP3-211ENST00000534401 CACFD1Q9UGQ2 172 aa16.17■□□□□ 0.18
PKP3-211ENST00000534401 DUXBA0A1W2PPF3 345 aa16.16■□□□□ 0.18
PKP3-211ENST00000534401 NDUFB6O95139 128 aa16.16■□□□□ 0.18
PKP3-211ENST00000534401 CTSGP08311 255 aa16.16■□□□□ 0.18
PKP3-211ENST00000534401 FOLR2P14207 255 aa16.16■□□□□ 0.18
PKP3-211ENST00000534401 BTCP35070 178 aa16.16■□□□□ 0.18
PKP3-211ENST00000534401 UBE2MP61081 183 aaKnown RBP16.16■□□□□ 0.18
PKP3-211ENST00000534401 DEFB114Q30KQ6 69 aa16.16■□□□□ 0.18
PKP3-211ENST00000534401 TRIQKQ629K1 86 aa16.16■□□□□ 0.18
PKP3-211ENST00000534401 UNQ9165/PRO28630Q6UXU0 137 aa16.16■□□□□ 0.18
PKP3-211ENST00000534401 LYZL2Q7Z4W2 148 aa16.16■□□□□ 0.18
PKP3-211ENST00000534401 RNASE11Q8TAA1 199 aaKnown RBP16.16■□□□□ 0.18
PKP3-211ENST00000534401 CHRDL1Q9BU40 450 aa16.16■□□□□ 0.18
PKP3-211ENST00000534401 PDCD10Q9BUL8 212 aa16.16■□□□□ 0.18
PKP3-211ENST00000534401 ZC4H2Q9NQZ6 224 aa16.16■□□□□ 0.18
PKP3-211ENST00000534401 PIGBOS1A0A0B4J2F0 54 aa16.15■□□□□ 0.18
PKP3-211ENST00000534401 MT-CO2P00403 227 aa16.15■□□□□ 0.18
PKP3-211ENST00000534401 ANXA3P12429 323 aa16.15■□□□□ 0.18
PKP3-211ENST00000534401 CBLN1P23435 193 aa16.15■□□□□ 0.18
PKP3-211ENST00000534401 CCR6P51684 374 aa16.15■□□□□ 0.18
PKP3-211ENST00000534401 GAR1Q9NY12 217 aaKnown RBP16.15■□□□□ 0.18
PKP3-211ENST00000534401 TECRQ9NZ01 308 aaKnown RBP16.15■□□□□ 0.18
PKP3-211ENST00000534401 IGHV3-21A0A0B4J1V1 117 aa16.14■□□□□ 0.17
PKP3-211ENST00000534401 IZUMO1RA6ND01 250 aa16.14■□□□□ 0.17
PKP3-211ENST00000534401 OR2T8A6NH00 312 aa16.14■□□□□ 0.17
PKP3-211ENST00000534401 LY86O95711 162 aa16.14■□□□□ 0.17
PKP3-211ENST00000534401 SULT1A3P0DMM9 295 aa16.14■□□□□ 0.17
PKP3-211ENST00000534401 SULT1A4P0DMN0 295 aa16.14■□□□□ 0.17
PKP3-211ENST00000534401 EDN2P20800 178 aa16.14■□□□□ 0.17
PKP3-211ENST00000534401 SNCAP37840 140 aa16.14■□□□□ 0.17
PKP3-211ENST00000534401 MFAP4P55083 255 aa16.14■□□□□ 0.17
PKP3-211ENST00000534401 ANKRD55Q3KP44 614 aa16.14■□□□□ 0.17
PKP3-211ENST00000534401 LCN12Q6JVE5 192 aa16.14■□□□□ 0.17
PKP3-211ENST00000534401 TMED4Q7Z7H5 227 aa16.14■□□□□ 0.17
PKP3-211ENST00000534401 CENPSQ8N2Z9 138 aa16.14■□□□□ 0.17
PKP3-211ENST00000534401 TMEM190Q8WZ59 177 aa16.14■□□□□ 0.17
PKP3-211ENST00000534401 MISP3Q96FF7 219 aa16.14■□□□□ 0.17
PKP3-211ENST00000534401 SMAD5-AS1Q9Y6J3 95 aa16.14■□□□□ 0.17
PKP3-211ENST00000534401 A0A1B0GU03 582 aa16.13■□□□□ 0.17
PKP3-211ENST00000534401 ZNF785A8K8V0 405 aa16.13■□□□□ 0.17
PKP3-211ENST00000534401 A8MZ25 164 aa16.13■□□□□ 0.17
PKP3-211ENST00000534401 NDUFA4O00483 81 aa16.13■□□□□ 0.17
PKP3-211ENST00000534401 PLA2G10O15496 165 aa16.13■□□□□ 0.17
PKP3-211ENST00000534401 PITX3O75364 302 aa16.13■□□□□ 0.17
PKP3-211ENST00000534401 SFT2D2O95562 160 aa16.13■□□□□ 0.17
PKP3-211ENST00000534401 SUB1P53999 127 aaKnown RBP eCLIP16.13■□□□□ 0.17
PKP3-211ENST00000534401 PPP1R1AQ13522 171 aa16.13■□□□□ 0.17
PKP3-211ENST00000534401 CNPY1Q3B7I2 92 aa16.13■□□□□ 0.17
PKP3-211ENST00000534401 MARC2Q969Z3 335 aa16.13■□□□□ 0.17
PKP3-211ENST00000534401 PALMDQ9NP74 551 aa16.13■□□□□ 0.17
PKP3-211ENST00000534401 HSPB7Q9UBY9 170 aa16.13■□□□□ 0.17
PKP3-211ENST00000534401 CORTO00230 105 aa16.12■□□□□ 0.17
PKP3-211ENST00000534401 SLC25A6P12236 298 aa16.12■□□□□ 0.17
PKP3-211ENST00000534401 HOXA1P49639 335 aaPredicted RBP16.12■□□□□ 0.17
PKP3-211ENST00000534401 SMCO1Q147U7 214 aa16.12■□□□□ 0.17
PKP3-211ENST00000534401 CD300EQ496F6 205 aaPredicted RBP16.12■□□□□ 0.17
PKP3-211ENST00000534401 TM4SF20Q53R12 229 aa16.12■□□□□ 0.17
PKP3-211ENST00000534401 C2orf83Q53S99 150 aa16.12■□□□□ 0.17
PKP3-211ENST00000534401 ZNF320A2RRD8 509 aa16.11■□□□□ 0.17
PKP3-211ENST00000534401 K7EMT4 169 aa16.11■□□□□ 0.17
PKP3-211ENST00000534401 HTR2BP41595 481 aa16.11■□□□□ 0.17
PKP3-211ENST00000534401 INPP1P49441 399 aa16.11■□□□□ 0.17
PKP3-211ENST00000534401 TNFRSF9Q07011 255 aa16.11■□□□□ 0.17
PKP3-211ENST00000534401 TMEM170AQ8WVE7 144 aa16.11■□□□□ 0.17
PKP3-211ENST00000534401 FNDC4Q9H6D8 234 aaPredicted RBP16.11■□□□□ 0.17
PKP3-211ENST00000534401 ENY2Q9NPA8 101 aa16.11■□□□□ 0.17
PKP3-211ENST00000534401 MRPL27Q9P0M9 148 aaKnown RBP16.11■□□□□ 0.17
PKP3-211ENST00000534401 UFC1Q9Y3C8 167 aa16.11■□□□□ 0.17
PKP3-211ENST00000534401 IGHV3-35A0A0C4DH35 117 aa16.1■□□□□ 0.17
PKP3-211ENST00000534401 Q56UQ5 140 aa16.1■□□□□ 0.17
PKP3-211ENST00000534401 UXS1Q8NBZ7 420 aa16.1■□□□□ 0.17
PKP3-211ENST00000534401 CACNG8Q8WXS5 425 aa16.1■□□□□ 0.17
PKP3-211ENST00000534401 CCDC32Q9BV29 185 aa16.1■□□□□ 0.17
PKP3-211ENST00000534401 MLXQ9UH92 298 aa16.1■□□□□ 0.17
PKP3-211ENST00000534401 CENPXA8MT69 81 aa16.09■□□□□ 0.17
PKP3-211ENST00000534401 VAMP1P23763 118 aa16.09■□□□□ 0.17
PKP3-211ENST00000534401 CD69Q07108 199 aa16.09■□□□□ 0.17
PKP3-211ENST00000534401 OR10C1Q96KK4 312 aa16.09■□□□□ 0.17
PKP3-211ENST00000534401 HEYLQ9NQ87 328 aaPredicted RBP16.09■□□□□ 0.17
PKP3-211ENST00000534401 C19orf73Q9NVV2 129 aa16.09■□□□□ 0.17
PKP3-211ENST00000534401 FLVCR2Q9UPI3 526 aa16.09■□□□□ 0.17
PKP3-211ENST00000534401 TMED3Q9Y3Q3 217 aa16.09■□□□□ 0.17
PKP3-211ENST00000534401 C9orf170A2RU37 121 aa16.08■□□□□ 0.16
PKP3-211ENST00000534401 NUPL2O15504 423 aaKnown RBP16.08■□□□□ 0.16
PKP3-211ENST00000534401 TMEM50AO95807 157 aa16.08■□□□□ 0.16
PKP3-211ENST00000534401 IGHV3-48P01763 117 aa16.08■□□□□ 0.16
PKP3-211ENST00000534401 NHLRC4P0CG21 123 aaPredicted RBP16.08■□□□□ 0.16
PKP3-211ENST00000534401 NPBWR1P48145 328 aa16.08■□□□□ 0.16
PKP3-211ENST00000534401 DUSP18Q8NEJ0 188 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms