RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 A0A0U1RQV1 116 aa7.08□□□□□ -1.28
CSDE1-215ENST00000533818 LRCOL1A6NCL2 159 aa7.08□□□□□ -1.28
CSDE1-215ENST00000533818 SNTNA6NMZ2 147 aa7.08□□□□□ -1.28
CSDE1-215ENST00000533818 ZNF701M0R085 212 aaPredicted RBP7.08□□□□□ -1.28
CSDE1-215ENST00000533818 FKBP6O75344 327 aa7.08□□□□□ -1.28
CSDE1-215ENST00000533818 NXPH4O95158 308 aa7.08□□□□□ -1.28
CSDE1-215ENST00000533818 TMEM50BP56557 158 aa7.08□□□□□ -1.28
CSDE1-215ENST00000533818 RPS11P62280 158 aaKnown RBP eCLIP7.08□□□□□ -1.28
CSDE1-215ENST00000533818 PSG9Q00887 426 aa7.08□□□□□ -1.28
CSDE1-215ENST00000533818 ACSM3Q53FZ2 586 aa7.08□□□□□ -1.28
CSDE1-215ENST00000533818 MEDAGQ5VYS4 303 aa7.08□□□□□ -1.28
CSDE1-215ENST00000533818 PQLC1Q8N2U9 271 aa7.08□□□□□ -1.28
CSDE1-215ENST00000533818 Q8N814 137 aa7.08□□□□□ -1.28
CSDE1-215ENST00000533818 LSM10Q969L4 123 aaKnown RBP7.08□□□□□ -1.28
CSDE1-215ENST00000533818 SMIM19Q96E16 107 aa7.08□□□□□ -1.28
CSDE1-215ENST00000533818 ARHGAP5-AS1Q96IT6 56 aa7.08□□□□□ -1.28
CSDE1-215ENST00000533818 CLUHP3Q96NS8 147 aa7.08□□□□□ -1.28
CSDE1-215ENST00000533818 CIB1Q99828 191 aa7.08□□□□□ -1.28
CSDE1-215ENST00000533818 PECRQ9BY49 303 aa7.08□□□□□ -1.28
CSDE1-215ENST00000533818 LPAR5Q9H1C0 372 aa7.08□□□□□ -1.28
CSDE1-215ENST00000533818 TAS2R8Q9NYW2 309 aa7.08□□□□□ -1.28
CSDE1-215ENST00000533818 TAGLN3Q9UI15 199 aa7.08□□□□□ -1.28
CSDE1-215ENST00000533818 DBX1A6NMT0 343 aa7.07□□□□□ -1.28
CSDE1-215ENST00000533818 TMEM14DPA8MWL7 114 aa7.07□□□□□ -1.28
CSDE1-215ENST00000533818 G3V2T6 193 aa7.07□□□□□ -1.28
CSDE1-215ENST00000533818 H3BNG1 76 aa7.07□□□□□ -1.28
CSDE1-215ENST00000533818 OGG1O15527 345 aa7.07□□□□□ -1.28
CSDE1-215ENST00000533818 SLC22A5O76082 557 aa7.07□□□□□ -1.28
CSDE1-215ENST00000533818 MT-CO2P00403 227 aa7.07□□□□□ -1.28
CSDE1-215ENST00000533818 IGLV2-14P01704 120 aa7.07□□□□□ -1.28
CSDE1-215ENST00000533818 TSPOP30536 169 aa7.07□□□□□ -1.28
CSDE1-215ENST00000533818 RASSF2P50749 326 aa7.07□□□□□ -1.28
CSDE1-215ENST00000533818 PPP5CP53041 499 aa7.07□□□□□ -1.28
CSDE1-215ENST00000533818 MRPS15P82914 257 aaKnown RBP7.07□□□□□ -1.28
CSDE1-215ENST00000533818 QRFPP83859 136 aa7.07□□□□□ -1.28
CSDE1-215ENST00000533818 FAM89BQ8N5H3 189 aa7.07□□□□□ -1.28
CSDE1-215ENST00000533818 OR1P1Q8NH06 330 aa7.07□□□□□ -1.28
CSDE1-215ENST00000533818 MAFIPQ8WZ33 124 aa7.07□□□□□ -1.28
CSDE1-215ENST00000533818 CCDC124Q96CT7 223 aaKnown RBP7.07□□□□□ -1.28
CSDE1-215ENST00000533818 DAZAP1Q96EP5 407 aaKnown RBP7.07□□□□□ -1.28
CSDE1-215ENST00000533818 URM1Q9BTM9 101 aaKnown RBP7.07□□□□□ -1.28
CSDE1-215ENST00000533818 DCSTAMPQ9H295 470 aa7.07□□□□□ -1.28
CSDE1-215ENST00000533818 SAV1Q9H4B6 383 aaPredicted RBP7.07□□□□□ -1.28
CSDE1-215ENST00000533818 NDUFA4L2Q9NRX3 87 aa7.07□□□□□ -1.28
CSDE1-215ENST00000533818 SAC3D1A6NKF1 404 aa7.06□□□□□ -1.28
CSDE1-215ENST00000533818 AQP12BA6NM10 295 aa7.06□□□□□ -1.28
CSDE1-215ENST00000533818 PSCAO43653 123 aa7.06□□□□□ -1.28
CSDE1-215ENST00000533818 CDK1P06493 297 aa7.06□□□□□ -1.28
CSDE1-215ENST00000533818 FCGR3AP08637 254 aa7.06□□□□□ -1.28
CSDE1-215ENST00000533818 FGF2P09038 288 aa7.06□□□□□ -1.28
CSDE1-215ENST00000533818 AZU1P20160 251 aa7.06□□□□□ -1.28
CSDE1-215ENST00000533818 NPBWR1P48145 328 aa7.06□□□□□ -1.28
CSDE1-215ENST00000533818 HSP90B2PQ58FF3 399 aa7.06□□□□□ -1.28
CSDE1-215ENST00000533818 AQP12AQ8IXF9 295 aa7.06□□□□□ -1.28
CSDE1-215ENST00000533818 OR13F1Q8NGS4 319 aa7.06□□□□□ -1.28
CSDE1-215ENST00000533818 OR10J6PQ8NGY7 276 aa7.06□□□□□ -1.28
CSDE1-215ENST00000533818 PINX1Q96BK5 328 aaKnown RBP7.06□□□□□ -1.28
CSDE1-215ENST00000533818 IGF2BP2-AS1Q96M15 143 aa7.06□□□□□ -1.28
CSDE1-215ENST00000533818 CRCT1Q9UGL9 99 aa7.06□□□□□ -1.28
CSDE1-215ENST00000533818 A0A096LPF7 62 aa7.05□□□□□ -1.28
CSDE1-215ENST00000533818 PLAC8L1A1L4L8 177 aa7.05□□□□□ -1.28
CSDE1-215ENST00000533818 FOXI3A8MTJ6 420 aaPredicted RBP7.05□□□□□ -1.28
CSDE1-215ENST00000533818 DENRO43583 198 aaKnown RBP7.05□□□□□ -1.28
CSDE1-215ENST00000533818 HLA-DQB1P01920 261 aa7.05□□□□□ -1.28
CSDE1-215ENST00000533818 LIMS3P0CW19 117 aa7.05□□□□□ -1.28
CSDE1-215ENST00000533818 LIMS4P0CW20 117 aa7.05□□□□□ -1.28
CSDE1-215ENST00000533818 TAS2R31P59538 309 aa7.05□□□□□ -1.28
CSDE1-215ENST00000533818 RPL37AP61513 92 aaKnown RBP7.05□□□□□ -1.28
CSDE1-215ENST00000533818 EIF4EBP1Q13541 118 aaPredicted RBP7.05□□□□□ -1.28
CSDE1-215ENST00000533818 ZNF79Q15937 498 aa7.05□□□□□ -1.28
CSDE1-215ENST00000533818 FOXI2Q6ZQN5 318 aa7.05□□□□□ -1.28
CSDE1-215ENST00000533818 SPAG16Q8N0X2 631 aa7.05□□□□□ -1.28
CSDE1-215ENST00000533818 DMBX1Q8NFW5 382 aa7.05□□□□□ -1.28
CSDE1-215ENST00000533818 LINC00052Q96N35 136 aa7.05□□□□□ -1.28
CSDE1-215ENST00000533818 DERL3Q96Q80 235 aa7.05□□□□□ -1.28
CSDE1-215ENST00000533818 ABHD1Q96SE0 405 aa7.05□□□□□ -1.28
CSDE1-215ENST00000533818 CHAC1Q9BUX1 264 aa7.05□□□□□ -1.28
CSDE1-215ENST00000533818 GABARAPL3Q9BY60 117 aa7.05□□□□□ -1.28
CSDE1-215ENST00000533818 SCPEP1Q9HB40 452 aa7.05□□□□□ -1.28
CSDE1-215ENST00000533818 AMBNQ9NP70 447 aa7.05□□□□□ -1.28
CSDE1-215ENST00000533818 NRN1Q9NPD7 142 aa7.05□□□□□ -1.28
CSDE1-215ENST00000533818 TMEM140Q9NV12 185 aa7.05□□□□□ -1.28
CSDE1-215ENST00000533818 OR2W1Q9Y3N9 320 aa7.05□□□□□ -1.28
CSDE1-215ENST00000533818 TMEM50AO95807 157 aa7.04□□□□□ -1.28
CSDE1-215ENST00000533818 BPNT1O95861 308 aa7.04□□□□□ -1.28
CSDE1-215ENST00000533818 IGLV2-8P01709 118 aa7.04□□□□□ -1.28
CSDE1-215ENST00000533818 NQO2P16083 231 aa7.04□□□□□ -1.28
CSDE1-215ENST00000533818 HOXA5P20719 270 aa7.04□□□□□ -1.28
CSDE1-215ENST00000533818 RORCP51449 518 aa7.04□□□□□ -1.28
CSDE1-215ENST00000533818 POU2AF1Q16633 256 aa7.04□□□□□ -1.28
CSDE1-215ENST00000533818 PLAC9Q5JTB6 97 aa7.04□□□□□ -1.28
CSDE1-215ENST00000533818 C1orf100Q5SVJ3 147 aa7.04□□□□□ -1.28
CSDE1-215ENST00000533818 FAM78BQ5VT40 261 aa7.04□□□□□ -1.28
CSDE1-215ENST00000533818 C16orf54Q6UWD8 224 aa7.04□□□□□ -1.28
CSDE1-215ENST00000533818 TMED4Q7Z7H5 227 aa7.04□□□□□ -1.28
CSDE1-215ENST00000533818 OR52I1Q8NGK6 324 aa7.04□□□□□ -1.28
CSDE1-215ENST00000533818 TMEM230Q96A57 120 aa7.04□□□□□ -1.28
CSDE1-215ENST00000533818 CENPOQ9BU64 300 aa7.04□□□□□ -1.28
CSDE1-215ENST00000533818 DNAJC4Q9NNZ3 241 aa7.04□□□□□ -1.28
CSDE1-215ENST00000533818 BABAM2Q9NXR7 383 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms