RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 LY6G6FQ5SQ64 297 aa5.89□□□□□ -1.47
CTNND1-236ENST00000533667 PEAR1Q5VY43 1037 aaPredicted RBP5.89□□□□□ -1.47
CTNND1-236ENST00000533667 NR2C2APQ86WQ0 139 aa5.89□□□□□ -1.47
CTNND1-236ENST00000533667 ORMDL3Q8N138 153 aa5.89□□□□□ -1.47
CTNND1-236ENST00000533667 FAM57AQ8TBR7 257 aa5.89□□□□□ -1.47
CTNND1-236ENST00000533667 PRDM13Q9H4Q3 707 aa5.89□□□□□ -1.47
CTNND1-236ENST00000533667 TMEM242Q9NWH2 141 aa5.89□□□□□ -1.47
CTNND1-236ENST00000533667 PATJQ8NI35 1801 aa5.89□□□□□ -1.47
CTNND1-236ENST00000533667 C15orf61A6NNL5 157 aa5.88□□□□□ -1.47
CTNND1-236ENST00000533667 CEACAM4O75871 244 aa5.88□□□□□ -1.47
CTNND1-236ENST00000533667 TRGV3P03979 118 aa5.88□□□□□ -1.47
CTNND1-236ENST00000533667 EGR1P18146 543 aa5.88□□□□□ -1.47
CTNND1-236ENST00000533667 ATP5J2P56134 94 aa5.88□□□□□ -1.47
CTNND1-236ENST00000533667 ZNF324BQ6AW86 544 aaPredicted RBP5.88□□□□□ -1.47
CTNND1-236ENST00000533667 WDR82Q6UXN9 313 aa5.88□□□□□ -1.47
CTNND1-236ENST00000533667 ZNF497Q6ZNH5 498 aa5.88□□□□□ -1.47
CTNND1-236ENST00000533667 FBXL7Q9UJT9 491 aa5.88□□□□□ -1.47
CTNND1-236ENST00000533667 TRAV24A0A0B4J272 114 aa5.88□□□□□ -1.47
CTNND1-236ENST00000533667 GAGE12BA1L429 117 aa5.88□□□□□ -1.47
CTNND1-236ENST00000533667 ARPC1AQ92747 370 aa5.88□□□□□ -1.47
CTNND1-236ENST00000533667 SLC50A1Q9BRV3 221 aa5.88□□□□□ -1.47
CTNND1-236ENST00000533667 F11RQ9Y624 299 aaKnown RBP5.88□□□□□ -1.47
CTNND1-236ENST00000533667 PROB1E7EW31 1015 aa5.88□□□□□ -1.47
CTNND1-236ENST00000533667 EFEMP2O95967 443 aa5.88□□□□□ -1.47
CTNND1-236ENST00000533667 DNAL4O96015 105 aa5.88□□□□□ -1.47
CTNND1-236ENST00000533667 NPSP0C0P6 89 aa5.88□□□□□ -1.47
CTNND1-236ENST00000533667 IGHV1-2P23083 117 aa5.88□□□□□ -1.47
CTNND1-236ENST00000533667 ATP5G3P48201 142 aa5.88□□□□□ -1.47
CTNND1-236ENST00000533667 ZNF415Q09FC8 603 aa5.88□□□□□ -1.47
CTNND1-236ENST00000533667 FAM166AQ6J272 317 aa5.88□□□□□ -1.47
CTNND1-236ENST00000533667 ASCL2Q99929 193 aa5.88□□□□□ -1.47
CTNND1-236ENST00000533667 NEUROG3Q9Y4Z2 214 aa5.88□□□□□ -1.47
CTNND1-236ENST00000533667 COX11Q9Y6N1 276 aa5.88□□□□□ -1.47
CTNND1-236ENST00000533667 WNK3Q9BYP7 1800 aa5.88□□□□□ -1.47
CTNND1-236ENST00000533667 A0A1B0GW64 132 aa5.88□□□□□ -1.47
CTNND1-236ENST00000533667 C17orf100A8MU93 164 aa5.88□□□□□ -1.47
CTNND1-236ENST00000533667 H3BTX0 84 aa5.88□□□□□ -1.47
CTNND1-236ENST00000533667 C5orf47Q569G3 176 aa5.88□□□□□ -1.47
CTNND1-236ENST00000533667 PPP1R27Q86WC6 154 aa5.88□□□□□ -1.47
CTNND1-236ENST00000533667 FLVCR1-AS1Q8TAF5 88 aa5.88□□□□□ -1.47
CTNND1-236ENST00000533667 FBXL15Q9H469 300 aa5.88□□□□□ -1.47
CTNND1-236ENST00000533667 LINC01549A6NIU2 74 aa5.87□□□□□ -1.47
CTNND1-236ENST00000533667 COLCA2A8K830 154 aa5.87□□□□□ -1.47
CTNND1-236ENST00000533667 H3BRM9 83 aa5.87□□□□□ -1.47
CTNND1-236ENST00000533667 SPINK8P0C7L1 97 aa5.87□□□□□ -1.47
CTNND1-236ENST00000533667 LHX2P50458 406 aa5.87□□□□□ -1.47
CTNND1-236ENST00000533667 FOXA3P55318 350 aaPredicted RBP5.87□□□□□ -1.47
CTNND1-236ENST00000533667 MIR17HGQ75NE6 70 aa5.87□□□□□ -1.47
CTNND1-236ENST00000533667 FER1L6-AS1Q8NA97 138 aa5.87□□□□□ -1.47
CTNND1-236ENST00000533667 HIST1H2BLQ99880 126 aa5.87□□□□□ -1.47
CTNND1-236ENST00000533667 SPAG8Q99932 426 aaPredicted RBP5.87□□□□□ -1.47
CTNND1-236ENST00000533667 MRPL20Q9BYC9 149 aaKnown RBP5.87□□□□□ -1.47
CTNND1-236ENST00000533667 Q9H3A6 140 aa5.87□□□□□ -1.47
CTNND1-236ENST00000533667 TMEM160Q9NX00 188 aa5.87□□□□□ -1.47
CTNND1-236ENST00000533667 PIKFYVEQ9Y2I7 2098 aa5.87□□□□□ -1.47
CTNND1-236ENST00000533667 PPBPP02775 128 aa5.87□□□□□ -1.47
CTNND1-236ENST00000533667 CELA3AP09093 270 aa5.87□□□□□ -1.47
CTNND1-236ENST00000533667 LINC01559Q495D7 138 aa5.87□□□□□ -1.47
CTNND1-236ENST00000533667 GCSAMLQ5JQS6 135 aa5.87□□□□□ -1.47
CTNND1-236ENST00000533667 ATOH7Q8N100 152 aa5.87□□□□□ -1.47
CTNND1-236ENST00000533667 FAM216BQ8N7L0 139 aa5.87□□□□□ -1.47
CTNND1-236ENST00000533667 ZIC4Q8N9L1 334 aa5.87□□□□□ -1.47
CTNND1-236ENST00000533667 PLPPR1Q8TBJ4 325 aa5.87□□□□□ -1.47
CTNND1-236ENST00000533667 VWCEQ96DN2 955 aa5.87□□□□□ -1.47
CTNND1-236ENST00000533667 TMEM101Q96IK0 257 aa5.87□□□□□ -1.47
CTNND1-236ENST00000533667 TNFRSF18Q9Y5U5 241 aa5.87□□□□□ -1.47
CTNND1-236ENST00000533667 RP1P56715 2156 aa5.87□□□□□ -1.47
CTNND1-236ENST00000533667 IGKV1-9A0A0C4DH69 117 aa5.87□□□□□ -1.47
CTNND1-236ENST00000533667 EREGO14944 169 aa5.87□□□□□ -1.47
CTNND1-236ENST00000533667 ATP1A1-AS1Q5TC04 95 aa5.87□□□□□ -1.47
CTNND1-236ENST00000533667 FAM74A4Q5TZK3 123 aa5.87□□□□□ -1.47
CTNND1-236ENST00000533667 SCGB3A1Q96QR1 104 aa5.87□□□□□ -1.47
CTNND1-236ENST00000533667 KLK15Q9H2R5 256 aa5.87□□□□□ -1.47
CTNND1-236ENST00000533667 ST20Q9HBF5 79 aa5.87□□□□□ -1.47
CTNND1-236ENST00000533667 FOXA2Q9Y261 457 aaPredicted RBP5.87□□□□□ -1.47
CTNND1-236ENST00000533667 FAM181BA6NEQ2 426 aa5.87□□□□□ -1.47
CTNND1-236ENST00000533667 OR10J3Q5JRS4 329 aa5.87□□□□□ -1.47
CTNND1-236ENST00000533667 CENPVQ7Z7K6 275 aaPredicted RBP5.87□□□□□ -1.47
CTNND1-236ENST00000533667 CCL19Q99731 98 aa5.87□□□□□ -1.47
CTNND1-236ENST00000533667 PLXNA1Q9UIW2 1896 aa5.87□□□□□ -1.47
CTNND1-236ENST00000533667 BRCA1P38398 1863 aaKnown RBP5.86□□□□□ -1.47
CTNND1-236ENST00000533667 IGKV3D-15A0A087WSY6 115 aa5.86□□□□□ -1.47
CTNND1-236ENST00000533667 TRAV1-1A0A0B4J248 108 aa5.86□□□□□ -1.47
CTNND1-236ENST00000533667 IGKV1D-33P01593 117 aa5.86□□□□□ -1.47
CTNND1-236ENST00000533667 IGKV1-33P01594 117 aa5.86□□□□□ -1.47
CTNND1-236ENST00000533667 IGKV3-15P01624 115 aa5.86□□□□□ -1.47
CTNND1-236ENST00000533667 SAA1P0DJI8 122 aaPredicted RBP5.86□□□□□ -1.47
CTNND1-236ENST00000533667 HSD52Q0P140 79 aa5.86□□□□□ -1.47
CTNND1-236ENST00000533667 MORN2Q502X0 79 aa5.86□□□□□ -1.47
CTNND1-236ENST00000533667 TMEM170BQ5T4T1 132 aa5.86□□□□□ -1.47
CTNND1-236ENST00000533667 WDR83OSQ9Y284 106 aa5.86□□□□□ -1.47
CTNND1-236ENST00000533667 FABP5P3A8MUU1 101 aa5.86□□□□□ -1.47
CTNND1-236ENST00000533667 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.86□□□□□ -1.47
CTNND1-236ENST00000533667 H3BUT2 72 aa5.86□□□□□ -1.47
CTNND1-236ENST00000533667 APOMO95445 188 aa5.86□□□□□ -1.47
CTNND1-236ENST00000533667 GAS1P54826 345 aa5.86□□□□□ -1.47
CTNND1-236ENST00000533667 SUMO2P61956 95 aaKnown RBP5.86□□□□□ -1.47
CTNND1-236ENST00000533667 PRCDQ00LT1 54 aa5.86□□□□□ -1.47
CTNND1-236ENST00000533667 LY6EQ16553 131 aa5.86□□□□□ -1.47
CTNND1-236ENST00000533667 ATP5L2Q7Z4Y8 100 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms