RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 SLC24A4Q8NFF2 622 aa14.74□□□□□ -0.05
SMPD1-208ENST00000533123 OR10W1Q8NGF6 305 aa14.74□□□□□ -0.05
SMPD1-208ENST00000533123 TMEM167AQ8TBQ9 72 aa14.74□□□□□ -0.05
SMPD1-208ENST00000533123 TAF15Q92804 592 aaKnown RBP eCLIP14.74□□□□□ -0.05
SMPD1-208ENST00000533123 SSX3Q99909 188 aa14.74□□□□□ -0.05
SMPD1-208ENST00000533123 ZNF430Q9H8G1 570 aaPredicted RBP14.74□□□□□ -0.05
SMPD1-208ENST00000533123 PLEKHA3Q9HB20 300 aa14.74□□□□□ -0.05
SMPD1-208ENST00000533123 SMCO4Q9NRQ5 59 aa14.74□□□□□ -0.05
SMPD1-208ENST00000533123 A0A1B0GV50 99 aa14.74□□□□□ -0.05
SMPD1-208ENST00000533123 RAB5BP61020 215 aa14.74□□□□□ -0.05
SMPD1-208ENST00000533123 RPP30P78346 268 aaKnown RBP14.74□□□□□ -0.05
SMPD1-208ENST00000533123 OR2T10Q8NGZ9 312 aa14.74□□□□□ -0.05
SMPD1-208ENST00000533123 OR5B3Q8NH48 314 aa14.74□□□□□ -0.05
SMPD1-208ENST00000533123 VSTM2AQ8TAG5 236 aa14.74□□□□□ -0.05
SMPD1-208ENST00000533123 F8P00451 2351 aa14.74□□□□□ -0.05
SMPD1-208ENST00000533123 PLXNB1O43157 2135 aa14.73□□□□□ -0.05
SMPD1-208ENST00000533123 LY86O95711 162 aa14.73□□□□□ -0.05
SMPD1-208ENST00000533123 CA2P00918 260 aa14.73□□□□□ -0.05
SMPD1-208ENST00000533123 FAM106CPP0CH98 169 aa14.73□□□□□ -0.05
SMPD1-208ENST00000533123 ATP6V1FQ16864 119 aa14.73□□□□□ -0.05
SMPD1-208ENST00000533123 MRGPRG-AS1Q2M3A8 158 aa14.73□□□□□ -0.05
SMPD1-208ENST00000533123 VMA21Q3ZAQ7 101 aa14.73□□□□□ -0.05
SMPD1-208ENST00000533123 C15orf54Q8N8G6 183 aa14.73□□□□□ -0.05
SMPD1-208ENST00000533123 LYPD6BQ8NI32 183 aa14.73□□□□□ -0.05
SMPD1-208ENST00000533123 COMMD5Q9GZQ3 224 aa14.73□□□□□ -0.05
SMPD1-208ENST00000533123 FKBP11Q9NYL4 201 aa14.73□□□□□ -0.05
SMPD1-208ENST00000533123 UMAD1C9J7I0 102 aa14.73□□□□□ -0.05
SMPD1-208ENST00000533123 PRSS46E5RG02 174 aa14.73□□□□□ -0.05
SMPD1-208ENST00000533123 NPY1RP25929 384 aa14.73□□□□□ -0.05
SMPD1-208ENST00000533123 SRP14P37108 136 aaKnown RBP14.73□□□□□ -0.05
SMPD1-208ENST00000533123 LGALS7P47929 136 aa14.73□□□□□ -0.05
SMPD1-208ENST00000533123 VWC2Q2TAL6 325 aa14.73□□□□□ -0.05
SMPD1-208ENST00000533123 AKR1C8PQ5T2L2 129 aa14.73□□□□□ -0.05
SMPD1-208ENST00000533123 C9orf139Q6ZV77 190 aa14.73□□□□□ -0.05
SMPD1-208ENST00000533123 Q71RC1 249 aaPredicted RBP14.73□□□□□ -0.05
SMPD1-208ENST00000533123 OR4A5Q8NH83 315 aa14.73□□□□□ -0.05
SMPD1-208ENST00000533123 PIFOQ8TCI5 191 aa14.73□□□□□ -0.05
SMPD1-208ENST00000533123 PARD6GQ9BYG4 376 aaPredicted RBP14.73□□□□□ -0.05
SMPD1-208ENST00000533123 VSIRQ9H7M9 311 aa14.73□□□□□ -0.05
SMPD1-208ENST00000533123 FGF7P21781 194 aa14.72□□□□□ -0.05
SMPD1-208ENST00000533123 EBI3Q14213 229 aa14.72□□□□□ -0.05
SMPD1-208ENST00000533123 TEX29Q8N6K0 151 aa14.72□□□□□ -0.05
SMPD1-208ENST00000533123 C5orf52A6NGY3 159 aa14.72□□□□□ -0.05
SMPD1-208ENST00000533123 CGB1A6NKQ9 187 aa14.72□□□□□ -0.05
SMPD1-208ENST00000533123 FOSL1P15407 271 aa14.72□□□□□ -0.05
SMPD1-208ENST00000533123 TMEM11P17152 192 aa14.72□□□□□ -0.05
SMPD1-208ENST00000533123 MMDQ15546 238 aa14.72□□□□□ -0.05
SMPD1-208ENST00000533123 NDUFA4L2Q9NRX3 87 aa14.72□□□□□ -0.05
SMPD1-208ENST00000533123 A0A1B0GW64 132 aa14.71□□□□□ -0.05
SMPD1-208ENST00000533123 H3BUX3 64 aa14.71□□□□□ -0.05
SMPD1-208ENST00000533123 TSPAN15O95858 294 aa14.71□□□□□ -0.05
SMPD1-208ENST00000533123 ELLP55199 621 aaPredicted RBP14.71□□□□□ -0.05
SMPD1-208ENST00000533123 PSG5Q15238 335 aa14.71□□□□□ -0.05
SMPD1-208ENST00000533123 HIST1H2BAQ96A08 127 aa14.71□□□□□ -0.05
SMPD1-208ENST00000533123 RNF5Q99942 180 aa14.71□□□□□ -0.05
SMPD1-208ENST00000533123 PSMG3Q9BT73 122 aaPredicted RBP14.71□□□□□ -0.05
SMPD1-208ENST00000533123 GSX1Q9H4S2 264 aaPredicted RBP14.71□□□□□ -0.05
SMPD1-208ENST00000533123 Q8N6K4 173 aa14.7□□□□□ -0.06
SMPD1-208ENST00000533123 OR1L8Q8NGR8 309 aa14.7□□□□□ -0.06
SMPD1-208ENST00000533123 ZNF48Q96MX3 618 aaPredicted RBP14.7□□□□□ -0.06
SMPD1-208ENST00000533123 MAST4O15021 2626 aa14.7□□□□□ -0.06
SMPD1-208ENST00000533123 SMCO3A2RU48 225 aa14.7□□□□□ -0.06
SMPD1-208ENST00000533123 NCBP2LA6PVI3 153 aaKnown RBP14.7□□□□□ -0.06
SMPD1-208ENST00000533123 UBE2CO00762 179 aa14.7□□□□□ -0.06
SMPD1-208ENST00000533123 SMIM6P0DI80 62 aa14.7□□□□□ -0.06
SMPD1-208ENST00000533123 AKR1C3P42330 323 aa14.7□□□□□ -0.06
SMPD1-208ENST00000533123 RAB11AP62491 216 aa14.7□□□□□ -0.06
SMPD1-208ENST00000533123 RBMS3Q6XE24 437 aaKnown RBP14.7□□□□□ -0.06
SMPD1-208ENST00000533123 FBXL15Q9H469 300 aa14.7□□□□□ -0.06
SMPD1-208ENST00000533123 ZMAT5Q9UDW3 170 aaKnown RBP14.7□□□□□ -0.06
SMPD1-208ENST00000533123 C1orf196B1AJZ1 125 aa14.69□□□□□ -0.06
SMPD1-208ENST00000533123 CRYGBP07316 175 aa14.69□□□□□ -0.06
SMPD1-208ENST00000533123 HNF1AP20823 631 aa14.69□□□□□ -0.06
SMPD1-208ENST00000533123 MDKP21741 143 aaPredicted RBP14.69□□□□□ -0.06
SMPD1-208ENST00000533123 LY6EQ16553 131 aa14.69□□□□□ -0.06
SMPD1-208ENST00000533123 AKIRIN2Q53H80 203 aa14.69□□□□□ -0.06
SMPD1-208ENST00000533123 TMEM219Q86XT9 240 aa14.69□□□□□ -0.06
SMPD1-208ENST00000533123 NPCDR1Q9BY65 106 aa14.69□□□□□ -0.06
SMPD1-208ENST00000533123 RPRMQ9NS64 109 aa14.69□□□□□ -0.06
SMPD1-208ENST00000533123 METTL1Q9UBP6 276 aaKnown RBP14.69□□□□□ -0.06
SMPD1-208ENST00000533123 CUBNO60494 3623 aa14.69□□□□□ -0.06
SMPD1-208ENST00000533123 LINC00587B1AMM8 73 aa14.69□□□□□ -0.06
SMPD1-208ENST00000533123 NBR2O15453 112 aa14.69□□□□□ -0.06
SMPD1-208ENST00000533123 S100A8P05109 93 aa14.69□□□□□ -0.06
SMPD1-208ENST00000533123 PPT1P50897 306 aa14.69□□□□□ -0.06
SMPD1-208ENST00000533123 RNF212Q495C1 297 aa14.69□□□□□ -0.06
SMPD1-208ENST00000533123 SLC16A13Q7RTY0 426 aa14.69□□□□□ -0.06
SMPD1-208ENST00000533123 TEX45Q8NA69 505 aa14.69□□□□□ -0.06
SMPD1-208ENST00000533123 SIGLEC9Q9Y336 463 aa14.69□□□□□ -0.06
SMPD1-208ENST00000533123 NSD1Q96L73 2696 aaPredicted RBP14.68□□□□□ -0.06
SMPD1-208ENST00000533123 IGHV4-59P01825 116 aa14.68□□□□□ -0.06
SMPD1-208ENST00000533123 CCL20P78556 96 aa14.68□□□□□ -0.06
SMPD1-208ENST00000533123 WT1-ASQ06250 92 aa14.68□□□□□ -0.06
SMPD1-208ENST00000533123 PRSS8Q16651 343 aa14.68□□□□□ -0.06
SMPD1-208ENST00000533123 ACSM6Q6P461 480 aa14.68□□□□□ -0.06
SMPD1-208ENST00000533123 NPBQ8NG41 125 aa14.68□□□□□ -0.06
SMPD1-208ENST00000533123 TMEM160Q9NX00 188 aa14.68□□□□□ -0.06
SMPD1-208ENST00000533123 WDR83OSQ9Y284 106 aa14.68□□□□□ -0.06
SMPD1-208ENST00000533123 SNCAP37840 140 aa14.68□□□□□ -0.06
SMPD1-208ENST00000533123 PLGLAQ15195 96 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms