RNA–Protein interactions for RNA: ENST00000533078.5

CMTM1-216, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-216ENST00000533078 NSG2Q9Y328 171 aa8.41□□□□□ -1.06
CMTM1-216ENST00000533078 MT-CO2P00403 227 aa8.4□□□□□ -1.06
CMTM1-216ENST00000533078 NPY1RP25929 384 aa8.4□□□□□ -1.06
CMTM1-216ENST00000533078 G6PCP35575 357 aa8.4□□□□□ -1.06
CMTM1-216ENST00000533078 LPAR6P43657 344 aa8.4□□□□□ -1.06
CMTM1-216ENST00000533078 EIF2B2P49770 351 aaKnown RBP8.4□□□□□ -1.06
CMTM1-216ENST00000533078 AQP4P55087 323 aa8.4□□□□□ -1.06
CMTM1-216ENST00000533078 SCAND1P57086 179 aa8.4□□□□□ -1.06
CMTM1-216ENST00000533078 ERHP84090 104 aaKnown RBP8.4□□□□□ -1.06
CMTM1-216ENST00000533078 SFXN4Q6P4A7 337 aa8.4□□□□□ -1.06
CMTM1-216ENST00000533078 POM121L12Q8N7R1 296 aa8.4□□□□□ -1.06
CMTM1-216ENST00000533078 ST8SIA2Q92186 375 aa8.4□□□□□ -1.06
CMTM1-216ENST00000533078 MOB3AQ96BX8 217 aa8.4□□□□□ -1.06
CMTM1-216ENST00000533078 NDUFAF3Q9BU61 184 aa8.4□□□□□ -1.06
CMTM1-216ENST00000533078 TMEM14BQ9NUH8 114 aa8.4□□□□□ -1.06
CMTM1-216ENST00000533078 EHFQ9NZC4 300 aa8.4□□□□□ -1.06
CMTM1-216ENST00000533078 TBC1D24Q9ULP9 559 aa8.4□□□□□ -1.06
CMTM1-216ENST00000533078 SSR3Q9UNL2 185 aa8.4□□□□□ -1.06
CMTM1-216ENST00000533078 DEFB131BA0A096LNP1 70 aa8.39□□□□□ -1.07
CMTM1-216ENST00000533078 IFNA10P01566 189 aa8.39□□□□□ -1.07
CMTM1-216ENST00000533078 AMBPP02760 352 aa8.39□□□□□ -1.07
CMTM1-216ENST00000533078 FCER2P06734 321 aa8.39□□□□□ -1.07
CMTM1-216ENST00000533078 GNRHRP30968 328 aa8.39□□□□□ -1.07
CMTM1-216ENST00000533078 FGF9P31371 208 aaPredicted RBP8.39□□□□□ -1.07
CMTM1-216ENST00000533078 TOMM20LQ6UXN7 152 aa8.39□□□□□ -1.07
CMTM1-216ENST00000533078 ZNF600Q6ZNG1 722 aa8.39□□□□□ -1.07
CMTM1-216ENST00000533078 UBE2DNLQ8IWF7 75 aa8.39□□□□□ -1.07
CMTM1-216ENST00000533078 FCAMRQ8WWV6 532 aa8.39□□□□□ -1.07
CMTM1-216ENST00000533078 ZNF414Q96IQ9 312 aa8.39□□□□□ -1.07
CMTM1-216ENST00000533078 VCX3BQ9H321 246 aa8.39□□□□□ -1.07
CMTM1-216ENST00000533078 VSIRQ9H7M9 311 aa8.39□□□□□ -1.07
CMTM1-216ENST00000533078 TXNL4BQ9NX01 149 aaKnown RBP8.39□□□□□ -1.07
CMTM1-216ENST00000533078 IGHV3-66A0A0C4DH42 116 aa8.38□□□□□ -1.07
CMTM1-216ENST00000533078 A0A1B0GVY2 172 aa8.38□□□□□ -1.07
CMTM1-216ENST00000533078 ZNF705EA8MWA4 302 aaPredicted RBP8.38□□□□□ -1.07
CMTM1-216ENST00000533078 I3L2K1 104 aa8.38□□□□□ -1.07
CMTM1-216ENST00000533078 PGLYRP1O75594 196 aaPredicted RBP8.38□□□□□ -1.07
CMTM1-216ENST00000533078 IFNA21P01568 189 aa8.38□□□□□ -1.07
CMTM1-216ENST00000533078 IFNA17P01571 189 aa8.38□□□□□ -1.07
CMTM1-216ENST00000533078 RBMY1A1P0DJD3 496 aaKnown RBP8.38□□□□□ -1.07
CMTM1-216ENST00000533078 RBMY1CP0DJD4 496 aa8.38□□□□□ -1.07
CMTM1-216ENST00000533078 NPPCP23582 126 aa8.38□□□□□ -1.07
CMTM1-216ENST00000533078 NUTF2P61970 127 aaKnown RBP8.38□□□□□ -1.07
CMTM1-216ENST00000533078 RBMY1FQ15415 496 aaKnown RBP8.38□□□□□ -1.07
CMTM1-216ENST00000533078 KCTD21Q4G0X4 260 aa8.38□□□□□ -1.07
CMTM1-216ENST00000533078 UBE2UQ5VVX9 321 aa8.38□□□□□ -1.07
CMTM1-216ENST00000533078 H2BFWTQ7Z2G1 175 aa8.38□□□□□ -1.07
CMTM1-216ENST00000533078 TRPT1Q86TN4 253 aaKnown RBP8.38□□□□□ -1.07
CMTM1-216ENST00000533078 ZNF114Q8NC26 417 aa8.38□□□□□ -1.07
CMTM1-216ENST00000533078 STXBP6Q8NFX7 210 aa8.38□□□□□ -1.07
CMTM1-216ENST00000533078 GRAMD2BQ96HH9 432 aa8.38□□□□□ -1.07
CMTM1-216ENST00000533078 METTL26Q96S19 204 aa8.38□□□□□ -1.07
CMTM1-216ENST00000533078 ZNF2Q9BSG1 426 aaPredicted RBP8.38□□□□□ -1.07
CMTM1-216ENST00000533078 C1QTNF4Q9BXJ3 329 aa8.38□□□□□ -1.07
CMTM1-216ENST00000533078 PUS1Q9Y606 427 aaKnown RBP eCLIP8.38□□□□□ -1.07
CMTM1-216ENST00000533078 M0R2N4 97 aa8.37□□□□□ -1.07
CMTM1-216ENST00000533078 GPR31O00270 319 aa8.37□□□□□ -1.07
CMTM1-216ENST00000533078 IGHV3-48P01763 117 aa8.37□□□□□ -1.07
CMTM1-216ENST00000533078 PSMB9P28065 219 aa8.37□□□□□ -1.07
CMTM1-216ENST00000533078 SNCAP37840 140 aa8.37□□□□□ -1.07
CMTM1-216ENST00000533078 HSPA13P48723 471 aa8.37□□□□□ -1.07
CMTM1-216ENST00000533078 TAS2R46P59540 309 aa8.37□□□□□ -1.07
CMTM1-216ENST00000533078 OR5H2Q8NGV7 314 aa8.37□□□□□ -1.07
CMTM1-216ENST00000533078 CNBD2Q96M20 576 aa8.37□□□□□ -1.07
CMTM1-216ENST00000533078 AUNIPQ9H7T9 357 aa8.37□□□□□ -1.07
CMTM1-216ENST00000533078 MEIS3P1A6NDR6 274 aa8.36□□□□□ -1.07
CMTM1-216ENST00000533078 CORTO00230 105 aa8.36□□□□□ -1.07
CMTM1-216ENST00000533078 ATP6V1G2O95670 118 aa8.36□□□□□ -1.07
CMTM1-216ENST00000533078 ZNF688P0C7X2 276 aa8.36□□□□□ -1.07
CMTM1-216ENST00000533078 SUB1P53999 127 aaKnown RBP eCLIP8.36□□□□□ -1.07
CMTM1-216ENST00000533078 PRCDQ00LT1 54 aa8.36□□□□□ -1.07
CMTM1-216ENST00000533078 MXD1Q05195 221 aa8.36□□□□□ -1.07
CMTM1-216ENST00000533078 LGALS9BQ3B8N2 356 aa8.36□□□□□ -1.07
CMTM1-216ENST00000533078 ACTL10Q5JWF8 245 aa8.36□□□□□ -1.07
CMTM1-216ENST00000533078 IDNKQ5T6J7 187 aa8.36□□□□□ -1.07
CMTM1-216ENST00000533078 LPCAT3Q6P1A2 487 aa8.36□□□□□ -1.07
CMTM1-216ENST00000533078 DHRS11Q6UWP2 260 aa8.36□□□□□ -1.07
CMTM1-216ENST00000533078 FAM24BQ8N5W8 94 aa8.36□□□□□ -1.07
CMTM1-216ENST00000533078 OR6F1Q8NGZ6 308 aa8.36□□□□□ -1.07
CMTM1-216ENST00000533078 FAM212BQ9NTI7 297 aaPredicted RBP8.36□□□□□ -1.07
CMTM1-216ENST00000533078 ELOA3CA0A087WX78 387 aaPredicted RBP8.35□□□□□ -1.07
CMTM1-216ENST00000533078 HELTA6NFD8 242 aa8.35□□□□□ -1.07
CMTM1-216ENST00000533078 KNCNA6PVL3 124 aa8.35□□□□□ -1.07
CMTM1-216ENST00000533078 APOHP02749 345 aaPredicted RBP8.35□□□□□ -1.07
CMTM1-216ENST00000533078 SDC2P34741 201 aa8.35□□□□□ -1.07
CMTM1-216ENST00000533078 RFX2P48378 723 aa8.35□□□□□ -1.07
CMTM1-216ENST00000533078 HSPE1P61604 102 aaKnown RBP8.35□□□□□ -1.07
CMTM1-216ENST00000533078 SLC35G3Q8N808 338 aa8.35□□□□□ -1.07
CMTM1-216ENST00000533078 FCGR1BQ92637 280 aa8.35□□□□□ -1.07
CMTM1-216ENST00000533078 TMEM230Q96A57 120 aa8.35□□□□□ -1.07
CMTM1-216ENST00000533078 PDCD10Q9BUL8 212 aa8.35□□□□□ -1.07
CMTM1-216ENST00000533078 CLEC5AQ9NY25 188 aa8.35□□□□□ -1.07
CMTM1-216ENST00000533078 X6R8D5 127 aa8.35□□□□□ -1.07
CMTM1-216ENST00000533078 HSPG2P98160 4391 aa8.35□□□□□ -1.07
CMTM1-216ENST00000533078 DBX1A6NMT0 343 aa8.34□□□□□ -1.07
CMTM1-216ENST00000533078 K7EQG2 157 aa8.34□□□□□ -1.07
CMTM1-216ENST00000533078 RTL8CO15255 209 aa8.34□□□□□ -1.07
CMTM1-216ENST00000533078 TMEM127O75204 238 aa8.34□□□□□ -1.07
CMTM1-216ENST00000533078 PMP2P02689 132 aa8.34□□□□□ -1.07
CMTM1-216ENST00000533078 C4BPBP20851 252 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms