RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 A0A0G2JRQ6 117 aa11.66□□□□□ -0.54
CPSF1-210ENST00000532935 C2orf70A6NJV1 201 aa11.66□□□□□ -0.54
CPSF1-210ENST00000532935 K7EIM0 57 aa11.66□□□□□ -0.54
CPSF1-210ENST00000532935 ST8SIA3O43173 380 aa11.66□□□□□ -0.54
CPSF1-210ENST00000532935 ERHP84090 104 aaKnown RBP11.66□□□□□ -0.54
CPSF1-210ENST00000532935 FAM106AQ4KMX7 169 aa11.66□□□□□ -0.54
CPSF1-210ENST00000532935 SPINK9Q5DT21 86 aa11.66□□□□□ -0.54
CPSF1-210ENST00000532935 LCN12Q6JVE5 192 aa11.66□□□□□ -0.54
CPSF1-210ENST00000532935 SGPP2Q8IWX5 399 aa11.66□□□□□ -0.54
CPSF1-210ENST00000532935 SELENOHQ8IZQ5 122 aaKnown RBP11.66□□□□□ -0.54
CPSF1-210ENST00000532935 ZNF114Q8NC26 417 aa11.66□□□□□ -0.54
CPSF1-210ENST00000532935 SCARB1Q8WTV0 552 aa11.66□□□□□ -0.54
CPSF1-210ENST00000532935 RBPMSQ93062 196 aaKnown RBP11.66□□□□□ -0.54
CPSF1-210ENST00000532935 TMEM230Q96A57 120 aa11.66□□□□□ -0.54
CPSF1-210ENST00000532935 ZNF320A2RRD8 509 aa11.65□□□□□ -0.54
CPSF1-210ENST00000532935 C7orf66A4D0T2 115 aa11.65□□□□□ -0.54
CPSF1-210ENST00000532935 IZUMO1RA6ND01 250 aa11.65□□□□□ -0.54
CPSF1-210ENST00000532935 OR2T8A6NH00 312 aa11.65□□□□□ -0.54
CPSF1-210ENST00000532935 TGOLN2O43493 480 aa11.65□□□□□ -0.54
CPSF1-210ENST00000532935 IFNA17P01571 189 aa11.65□□□□□ -0.54
CPSF1-210ENST00000532935 IL5P05113 134 aa11.65□□□□□ -0.54
CPSF1-210ENST00000532935 FOLR2P14207 255 aa11.65□□□□□ -0.54
CPSF1-210ENST00000532935 EDN2P20800 178 aa11.65□□□□□ -0.54
CPSF1-210ENST00000532935 FAM219AQ8IW50 185 aa11.65□□□□□ -0.54
CPSF1-210ENST00000532935 SLC35G3Q8N808 338 aa11.65□□□□□ -0.54
CPSF1-210ENST00000532935 OR2K2Q8NGT1 345 aa11.65□□□□□ -0.54
CPSF1-210ENST00000532935 ATP6V0BQ99437 205 aa11.65□□□□□ -0.54
CPSF1-210ENST00000532935 NEURL2Q9BR09 285 aa11.65□□□□□ -0.54
CPSF1-210ENST00000532935 PDCD10Q9BUL8 212 aa11.65□□□□□ -0.54
CPSF1-210ENST00000532935 C20orf85Q9H1P6 137 aa11.65□□□□□ -0.54
CPSF1-210ENST00000532935 NUDT15Q9NV35 164 aa11.65□□□□□ -0.54
CPSF1-210ENST00000532935 C21orf62Q9NYP8 219 aa11.65□□□□□ -0.54
CPSF1-210ENST00000532935 IGHV3-35A0A0C4DH35 117 aa11.64□□□□□ -0.55
CPSF1-210ENST00000532935 A8MWP6 167 aa11.64□□□□□ -0.55
CPSF1-210ENST00000532935 CCR6P51684 374 aa11.64□□□□□ -0.55
CPSF1-210ENST00000532935 TMEM268Q5VZI3 342 aa11.64□□□□□ -0.55
CPSF1-210ENST00000532935 C11orf87Q6NUJ2 197 aa11.64□□□□□ -0.55
CPSF1-210ENST00000532935 UNQ9165/PRO28630Q6UXU0 137 aa11.64□□□□□ -0.55
CPSF1-210ENST00000532935 Q6ZRM9 215 aa11.64□□□□□ -0.55
CPSF1-210ENST00000532935 DYNLRB2Q8TF09 96 aa11.64□□□□□ -0.55
CPSF1-210ENST00000532935 MISP3Q96FF7 219 aa11.64□□□□□ -0.55
CPSF1-210ENST00000532935 GALNT14Q96FL9 552 aa11.64□□□□□ -0.55
CPSF1-210ENST00000532935 BSCL2Q96G97 398 aaPredicted RBP11.64□□□□□ -0.55
CPSF1-210ENST00000532935 ZNF436Q9C0F3 470 aaPredicted RBP11.64□□□□□ -0.55
CPSF1-210ENST00000532935 KCNIP3Q9Y2W7 256 aa11.64□□□□□ -0.55
CPSF1-210ENST00000532935 TMEM56-RWDD3S4R434 201 aa11.64□□□□□ -0.55
CPSF1-210ENST00000532935 TMEM213A2RRL7 107 aa11.63□□□□□ -0.55
CPSF1-210ENST00000532935 F8W735 103 aaPredicted RBP11.63□□□□□ -0.55
CPSF1-210ENST00000532935 INS-IGF2F8WCM5 200 aa11.63□□□□□ -0.55
CPSF1-210ENST00000532935 I3L2K1 104 aa11.63□□□□□ -0.55
CPSF1-210ENST00000532935 NHLRC4P0CG21 123 aaPredicted RBP11.63□□□□□ -0.55
CPSF1-210ENST00000532935 AKR1C4P17516 323 aa11.63□□□□□ -0.55
CPSF1-210ENST00000532935 CBLN1P23435 193 aa11.63□□□□□ -0.55
CPSF1-210ENST00000532935 TMEM187Q14656 261 aa11.63□□□□□ -0.55
CPSF1-210ENST00000532935 DEFB114Q30KQ6 69 aa11.63□□□□□ -0.55
CPSF1-210ENST00000532935 CD300EQ496F6 205 aaPredicted RBP11.63□□□□□ -0.55
CPSF1-210ENST00000532935 SPSB3Q6PJ21 355 aa11.63□□□□□ -0.55
CPSF1-210ENST00000532935 Q8N1Y9 231 aa11.63□□□□□ -0.55
CPSF1-210ENST00000532935 UBAC2Q8NBM4 344 aa11.63□□□□□ -0.55
CPSF1-210ENST00000532935 CACNG8Q8WXS5 425 aa11.63□□□□□ -0.55
CPSF1-210ENST00000532935 ASCL2Q99929 193 aa11.63□□□□□ -0.55
CPSF1-210ENST00000532935 GPN1Q9HCN4 374 aaPredicted RBP11.63□□□□□ -0.55
CPSF1-210ENST00000532935 TECRQ9NZ01 308 aaKnown RBP11.63□□□□□ -0.55
CPSF1-210ENST00000532935 SNRPGP15A8MWD9 76 aa11.62□□□□□ -0.55
CPSF1-210ENST00000532935 MT-CO2P00403 227 aa11.62□□□□□ -0.55
CPSF1-210ENST00000532935 SNCAP37840 140 aa11.62□□□□□ -0.55
CPSF1-210ENST00000532935 HOXA1P49639 335 aaPredicted RBP11.62□□□□□ -0.55
CPSF1-210ENST00000532935 SUPT4H1P63272 117 aaKnown RBP11.62□□□□□ -0.55
CPSF1-210ENST00000532935 AARDQ4LEZ3 155 aa11.62□□□□□ -0.55
CPSF1-210ENST00000532935 TM4SF20Q53R12 229 aa11.62□□□□□ -0.55
CPSF1-210ENST00000532935 Q56UQ5 140 aa11.62□□□□□ -0.55
CPSF1-210ENST00000532935 AKAP14Q86UN6 197 aa11.62□□□□□ -0.55
CPSF1-210ENST00000532935 IL22RA2Q969J5 263 aa11.62□□□□□ -0.55
CPSF1-210ENST00000532935 GPR146Q96CH1 333 aa11.62□□□□□ -0.55
CPSF1-210ENST00000532935 CHRDL1Q9BU40 450 aa11.62□□□□□ -0.55
CPSF1-210ENST00000532935 ENY2Q9NPA8 101 aa11.62□□□□□ -0.55
CPSF1-210ENST00000532935 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.62□□□□□ -0.55
CPSF1-210ENST00000532935 PRR13Q9NZ81 148 aa11.62□□□□□ -0.55
CPSF1-210ENST00000532935 CACNG5Q9UF02 275 aa11.62□□□□□ -0.55
CPSF1-210ENST00000532935 ALG5Q9Y673 324 aa11.62□□□□□ -0.55
CPSF1-210ENST00000532935 TRAV6A0A075B6T7 132 aa11.61□□□□□ -0.55
CPSF1-210ENST00000532935 FRMD6-AS1P0C7T7 363 aa11.61□□□□□ -0.55
CPSF1-210ENST00000532935 ADMP35318 185 aa11.61□□□□□ -0.55
CPSF1-210ENST00000532935 MFAP4P55083 255 aa11.61□□□□□ -0.55
CPSF1-210ENST00000532935 ELLP55199 621 aaPredicted RBP11.61□□□□□ -0.55
CPSF1-210ENST00000532935 SPCS3P61009 180 aa11.61□□□□□ -0.55
CPSF1-210ENST00000532935 TMED4Q7Z7H5 227 aa11.61□□□□□ -0.55
CPSF1-210ENST00000532935 GTSCR1Q86UQ5 136 aa11.61□□□□□ -0.55
CPSF1-210ENST00000532935 UXS1Q8NBZ7 420 aa11.61□□□□□ -0.55
CPSF1-210ENST00000532935 OR52E5Q8NH55 327 aa11.61□□□□□ -0.55
CPSF1-210ENST00000532935 TMEM190Q8WZ59 177 aa11.61□□□□□ -0.55
CPSF1-210ENST00000532935 PINX1Q96BK5 328 aaKnown RBP11.61□□□□□ -0.55
CPSF1-210ENST00000532935 GAR1Q9NY12 217 aaKnown RBP11.61□□□□□ -0.55
CPSF1-210ENST00000532935 UFC1Q9Y3C8 167 aa11.61□□□□□ -0.55
CPSF1-210ENST00000532935 ZNF785A8K8V0 405 aa11.6□□□□□ -0.55
CPSF1-210ENST00000532935 IGHV3-48P01763 117 aa11.6□□□□□ -0.55
CPSF1-210ENST00000532935 IGHV4-30-4P0DP06 118 aa11.6□□□□□ -0.55
CPSF1-210ENST00000532935 RNASE2P10153 161 aaKnown RBP11.6□□□□□ -0.55
CPSF1-210ENST00000532935 ANXA3P12429 323 aa11.6□□□□□ -0.55
CPSF1-210ENST00000532935 FCGR2BP31994 310 aaPredicted RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms