RNA–Protein interactions for RNA: ENST00000532881.5

SSH3-210, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 1 (best)

Gene SSH3, Length 2,587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-210ENST00000532881 C1orf174Q8IYL3 243 aa12.09□□□□□ -0.47
SSH3-210ENST00000532881 TMEM18Q96B42 140 aa12.09□□□□□ -0.47
SSH3-210ENST00000532881 ZFHX3Q15911 3703 aa12.08□□□□□ -0.48
SSH3-210ENST00000532881 A8MWP6 167 aa12.08□□□□□ -0.48
SSH3-210ENST00000532881 RTL8BQ17RB0 113 aa12.08□□□□□ -0.48
SSH3-210ENST00000532881 ST6GALNAC3Q8NDV1 305 aa12.08□□□□□ -0.48
SSH3-210ENST00000532881 PRNDQ9UKY0 176 aa12.08□□□□□ -0.48
SSH3-210ENST00000532881 HELTA6NFD8 242 aa12.08□□□□□ -0.48
SSH3-210ENST00000532881 THBDP07204 575 aa12.08□□□□□ -0.48
SSH3-210ENST00000532881 CEACAM8P31997 349 aaPredicted RBP12.08□□□□□ -0.48
SSH3-210ENST00000532881 REC114Q7Z4M0 266 aa12.08□□□□□ -0.48
SSH3-210ENST00000532881 OR1L6Q8NGR2 347 aa12.08□□□□□ -0.48
SSH3-210ENST00000532881 IGFBPL1Q8WX77 278 aa12.08□□□□□ -0.48
SSH3-210ENST00000532881 MRPL18Q9H0U6 180 aaKnown RBP12.08□□□□□ -0.48
SSH3-210ENST00000532881 FNDC4Q9H6D8 234 aaPredicted RBP12.08□□□□□ -0.48
SSH3-210ENST00000532881 CGB1A6NKQ9 187 aa12.07□□□□□ -0.48
SSH3-210ENST00000532881 MGST1P10620 155 aaKnown RBP12.07□□□□□ -0.48
SSH3-210ENST00000532881 CD99P14209 185 aa12.07□□□□□ -0.48
SSH3-210ENST00000532881 TNFSF4P23510 183 aa12.07□□□□□ -0.48
SSH3-210ENST00000532881 WT1-ASQ06250 92 aa12.07□□□□□ -0.48
SSH3-210ENST00000532881 IGFL3Q6UXB1 125 aa12.07□□□□□ -0.48
SSH3-210ENST00000532881 MMD2Q8IY49 270 aa12.07□□□□□ -0.48
SSH3-210ENST00000532881 ABHD17AQ96GS6 310 aa12.07□□□□□ -0.48
SSH3-210ENST00000532881 V9GYV3 84 aa12.07□□□□□ -0.48
SSH3-210ENST00000532881 TLN1Q9Y490 2541 aaKnown RBP12.07□□□□□ -0.48
SSH3-210ENST00000532881 TRAV34A0A0B4J273 112 aa12.07□□□□□ -0.48
SSH3-210ENST00000532881 hADV38S2A0JD32 116 aa12.07□□□□□ -0.48
SSH3-210ENST00000532881 LYNX1G3V0Z9 82 aa12.07□□□□□ -0.48
SSH3-210ENST00000532881 LYNX1P0DP58 116 aa12.07□□□□□ -0.48
SSH3-210ENST00000532881 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.07□□□□□ -0.48
SSH3-210ENST00000532881 FAM57AQ8TBR7 257 aa12.07□□□□□ -0.48
SSH3-210ENST00000532881 FAM168AQ92567 244 aa12.07□□□□□ -0.48
SSH3-210ENST00000532881 SSBP3Q9BWW4 388 aaPredicted RBP12.07□□□□□ -0.48
SSH3-210ENST00000532881 CTSZQ9UBR2 303 aa12.07□□□□□ -0.48
SSH3-210ENST00000532881 MUC6Q6W4X9 2439 aa12.06□□□□□ -0.48
SSH3-210ENST00000532881 C17orf100A8MU93 164 aa12.06□□□□□ -0.48
SSH3-210ENST00000532881 SNURFLB1AK76 121 aa12.06□□□□□ -0.48
SSH3-210ENST00000532881 H0YJW9 148 aa12.06□□□□□ -0.48
SSH3-210ENST00000532881 FCN1O00602 326 aa12.06□□□□□ -0.48
SSH3-210ENST00000532881 SERF1AO75920 110 aa12.06□□□□□ -0.48
SSH3-210ENST00000532881 GNG4P50150 75 aa12.06□□□□□ -0.48
SSH3-210ENST00000532881 USF2Q15853 346 aaPredicted RBP12.06□□□□□ -0.48
SSH3-210ENST00000532881 ZNF600Q6ZNG1 722 aa12.06□□□□□ -0.48
SSH3-210ENST00000532881 SFXN3Q9BWM7 321 aa12.06□□□□□ -0.48
SSH3-210ENST00000532881 COMMD5Q9GZQ3 224 aa12.06□□□□□ -0.48
SSH3-210ENST00000532881 SAP30LQ9HAJ7 183 aa12.06□□□□□ -0.48
SSH3-210ENST00000532881 IL36BQ9NZH7 164 aa12.06□□□□□ -0.48
SSH3-210ENST00000532881 RNF114Q9Y508 228 aa12.06□□□□□ -0.48
SSH3-210ENST00000532881 ITGB1BP1O14713 200 aa12.06□□□□□ -0.48
SSH3-210ENST00000532881 TMEM108Q6UXF1 575 aa12.06□□□□□ -0.48
SSH3-210ENST00000532881 NPIPB3Q92617 1050 aa12.06□□□□□ -0.48
SSH3-210ENST00000532881 ZNF714Q96N38 554 aa12.06□□□□□ -0.48
SSH3-210ENST00000532881 CBLN4Q9NTU7 201 aa12.06□□□□□ -0.48
SSH3-210ENST00000532881 SERTAD4Q9NUC0 356 aa12.06□□□□□ -0.48
SSH3-210ENST00000532881 FKBP11Q9NYL4 201 aa12.06□□□□□ -0.48
SSH3-210ENST00000532881 ABCA4P78363 2273 aa12.05□□□□□ -0.48
SSH3-210ENST00000532881 H3BTX0 84 aa12.05□□□□□ -0.48
SSH3-210ENST00000532881 CDKN1AP38936 164 aa12.05□□□□□ -0.48
SSH3-210ENST00000532881 POU2AF1Q16633 256 aa12.05□□□□□ -0.48
SSH3-210ENST00000532881 TEX36Q5VZQ5 186 aa12.05□□□□□ -0.48
SSH3-210ENST00000532881 HCP5Q6MZN7 132 aa12.05□□□□□ -0.48
SSH3-210ENST00000532881 MRPL54Q6P161 138 aaKnown RBP12.05□□□□□ -0.48
SSH3-210ENST00000532881 OR10X1Q8NGY0 326 aa12.05□□□□□ -0.48
SSH3-210ENST00000532881 ADTRPQ96IZ2 230 aa12.05□□□□□ -0.48
SSH3-210ENST00000532881 MS4A10Q96PG2 267 aa12.05□□□□□ -0.48
SSH3-210ENST00000532881 ATG101Q9BSB4 218 aa12.05□□□□□ -0.48
SSH3-210ENST00000532881 LINC00312Q9Y6C7 94 aa12.05□□□□□ -0.48
SSH3-210ENST00000532881 EREGO14944 169 aa12.05□□□□□ -0.48
SSH3-210ENST00000532881 SLC25A17O43808 307 aa12.05□□□□□ -0.48
SSH3-210ENST00000532881 CNTFRP26992 372 aa12.05□□□□□ -0.48
SSH3-210ENST00000532881 CD69Q07108 199 aa12.05□□□□□ -0.48
SSH3-210ENST00000532881 ZNF833PQ6ZTB9 187 aa12.05□□□□□ -0.48
SSH3-210ENST00000532881 FAM103A1Q9BTL3 118 aaKnown RBP12.05□□□□□ -0.48
SSH3-210ENST00000532881 NDUFA4L2Q9NRX3 87 aa12.05□□□□□ -0.48
SSH3-210ENST00000532881 POLR3KQ9Y2Y1 108 aaPredicted RBP12.05□□□□□ -0.48
SSH3-210ENST00000532881 ZNF705FA8MVS1 300 aaPredicted RBP12.04□□□□□ -0.48
SSH3-210ENST00000532881 C16orf97H3BN30 126 aa12.04□□□□□ -0.48
SSH3-210ENST00000532881 ENSAO43768 121 aaKnown RBP12.04□□□□□ -0.48
SSH3-210ENST00000532881 GCGP01275 180 aa12.04□□□□□ -0.48
SSH3-210ENST00000532881 ZNF705DP0CH99 300 aaPredicted RBP12.04□□□□□ -0.48
SSH3-210ENST00000532881 ZNF705BP0CI00 300 aaPredicted RBP12.04□□□□□ -0.48
SSH3-210ENST00000532881 AREGP15514 252 aa12.04□□□□□ -0.48
SSH3-210ENST00000532881 RAB4BP61018 213 aa12.04□□□□□ -0.48
SSH3-210ENST00000532881 RPL8P62917 257 aaKnown RBP12.04□□□□□ -0.48
SSH3-210ENST00000532881 Q6ZWC4 215 aa12.04□□□□□ -0.48
SSH3-210ENST00000532881 FLYWCH2Q96CP2 140 aaKnown RBP12.04□□□□□ -0.48
SSH3-210ENST00000532881 GSX1Q9H4S2 264 aaPredicted RBP12.04□□□□□ -0.48
SSH3-210ENST00000532881 MOSP00540 346 aa12.04□□□□□ -0.48
SSH3-210ENST00000532881 CMTM2Q8TAZ6 248 aa12.04□□□□□ -0.48
SSH3-210ENST00000532881 CORO2AQ92828 525 aa12.04□□□□□ -0.48
SSH3-210ENST00000532881 SLC25A33Q9BSK2 321 aa12.04□□□□□ -0.48
SSH3-210ENST00000532881 SLC25A2Q9BXI2 301 aa12.04□□□□□ -0.48
SSH3-210ENST00000532881 ZNF430Q9H8G1 570 aaPredicted RBP12.04□□□□□ -0.48
SSH3-210ENST00000532881 TECRQ9NZ01 308 aaKnown RBP12.04□□□□□ -0.48
SSH3-210ENST00000532881 ARHGAP32A7KAX9 2087 aa12.04□□□□□ -0.48
SSH3-210ENST00000532881 PPIAL4EA0A075B759 164 aa12.03□□□□□ -0.48
SSH3-210ENST00000532881 PPIAL4DF5H284 164 aa12.03□□□□□ -0.48
SSH3-210ENST00000532881 MT-CO2P00403 227 aa12.03□□□□□ -0.48
SSH3-210ENST00000532881 IGLV2-8P01709 118 aa12.03□□□□□ -0.48
SSH3-210ENST00000532881 PPIAL4FP0DN26 164 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms