RNA–Protein interactions for RNA: ENST00000532463.5

CTNND1-231, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-231ENST00000532463 A0A0J9YW62 118 aa6.85□□□□□ -1.31
CTNND1-231ENST00000532463 PSCAO43653 123 aa6.85□□□□□ -1.31
CTNND1-231ENST00000532463 UPK3AO75631 287 aa6.85□□□□□ -1.31
CTNND1-231ENST00000532463 HEPN1Q6WQI6 88 aa6.85□□□□□ -1.31
CTNND1-231ENST00000532463 TRBV24-1A0A075B6N3 115 aa6.84□□□□□ -1.31
CTNND1-231ENST00000532463 TRAV13-1A0A0B4J241 112 aa6.84□□□□□ -1.31
CTNND1-231ENST00000532463 TRAV25A0A0B4J276 109 aa6.84□□□□□ -1.31
CTNND1-231ENST00000532463 IGHV5-51A0A0C4DH38 117 aa6.84□□□□□ -1.31
CTNND1-231ENST00000532463 CXorf51AA0A1B0GTR3 108 aa6.84□□□□□ -1.31
CTNND1-231ENST00000532463 NDUFS6O75380 124 aaKnown RBP6.84□□□□□ -1.31
CTNND1-231ENST00000532463 FOXH1O75593 365 aa6.84□□□□□ -1.31
CTNND1-231ENST00000532463 COX6B1P14854 86 aa6.84□□□□□ -1.31
CTNND1-231ENST00000532463 ZFP36L2P47974 494 aaKnown RBP6.84□□□□□ -1.31
CTNND1-231ENST00000532463 ZNF876PQ49A33 203 aa6.84□□□□□ -1.31
CTNND1-231ENST00000532463 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.84□□□□□ -1.31
CTNND1-231ENST00000532463 TMEM242Q9NWH2 141 aa6.84□□□□□ -1.31
CTNND1-231ENST00000532463 IGHV1OR21-1A0A087WYE8 117 aa6.84□□□□□ -1.31
CTNND1-231ENST00000532463 hDV102S1A0JD36 115 aa6.84□□□□□ -1.31
CTNND1-231ENST00000532463 CCL21O00585 134 aa6.84□□□□□ -1.31
CTNND1-231ENST00000532463 IGHV3-23P01764 117 aa6.84□□□□□ -1.31
CTNND1-231ENST00000532463 IGHG4P01861 327 aa6.84□□□□□ -1.31
CTNND1-231ENST00000532463 HMGA1P17096 107 aaKnown RBP6.84□□□□□ -1.31
CTNND1-231ENST00000532463 CRYBA4P53673 196 aa6.84□□□□□ -1.31
CTNND1-231ENST00000532463 TCF15Q12870 199 aa6.84□□□□□ -1.31
CTNND1-231ENST00000532463 TRAV12-1A0A0B4J245 112 aa6.84□□□□□ -1.31
CTNND1-231ENST00000532463 VCYO14598 125 aa6.84□□□□□ -1.31
CTNND1-231ENST00000532463 SMAD7O15105 426 aaKnown RBP6.84□□□□□ -1.31
CTNND1-231ENST00000532463 SEC61GP60059 68 aa6.84□□□□□ -1.31
CTNND1-231ENST00000532463 ERCC8Q13216 396 aa6.84□□□□□ -1.31
CTNND1-231ENST00000532463 PVRIGQ6DKI7 326 aa6.84□□□□□ -1.31
CTNND1-231ENST00000532463 LY6G5BQ8NDX9 201 aa6.84□□□□□ -1.31
CTNND1-231ENST00000532463 LHX9Q9NQ69 397 aa6.84□□□□□ -1.31
CTNND1-231ENST00000532463 LOC102723996A0A087X1L8 192 aa6.84□□□□□ -1.31
CTNND1-231ENST00000532463 TM4SF4P48230 202 aa6.84□□□□□ -1.31
CTNND1-231ENST00000532463 FOXL2P58012 376 aa6.84□□□□□ -1.31
CTNND1-231ENST00000532463 ATRAIDQ6UW56 229 aa6.84□□□□□ -1.31
CTNND1-231ENST00000532463 GPHA2Q96T91 129 aa6.84□□□□□ -1.31
CTNND1-231ENST00000532463 YBX2Q9Y2T7 364 aaKnown RBP6.84□□□□□ -1.31
CTNND1-231ENST00000532463 LIFP15018 202 aa6.83□□□□□ -1.32
CTNND1-231ENST00000532463 ZC2HC1BQ5TFG8 222 aa6.83□□□□□ -1.32
CTNND1-231ENST00000532463 ZNF826PQ6ZT77 177 aa6.83□□□□□ -1.32
CTNND1-231ENST00000532463 C1QL4Q86Z23 238 aa6.83□□□□□ -1.32
CTNND1-231ENST00000532463 Q96M66 194 aa6.83□□□□□ -1.32
CTNND1-231ENST00000532463 OVOL1O14753 267 aa6.83□□□□□ -1.32
CTNND1-231ENST00000532463 CRLF1O75462 422 aa6.83□□□□□ -1.32
CTNND1-231ENST00000532463 BRK1Q8WUW1 75 aa6.83□□□□□ -1.32
CTNND1-231ENST00000532463 SCARF2Q96GP6 870 aaPredicted RBP6.83□□□□□ -1.32
CTNND1-231ENST00000532463 FOXD3Q9UJU5 478 aaPredicted RBP6.83□□□□□ -1.32
CTNND1-231ENST00000532463 CTGFP29279 349 aa6.83□□□□□ -1.32
CTNND1-231ENST00000532463 GNG5P63218 68 aa6.83□□□□□ -1.32
CTNND1-231ENST00000532463 Q5BKY6 102 aa6.83□□□□□ -1.32
CTNND1-231ENST00000532463 TEX38Q6PEX7 206 aa6.83□□□□□ -1.32
CTNND1-231ENST00000532463 CLEC19AQ6UXS0 136 aa6.83□□□□□ -1.32
CTNND1-231ENST00000532463 RSPO2Q6UXX9 243 aaPredicted RBP6.83□□□□□ -1.32
CTNND1-231ENST00000532463 PRSS41Q7RTY9 318 aa6.83□□□□□ -1.32
CTNND1-231ENST00000532463 AMN1Q8IY45 258 aa6.83□□□□□ -1.32
CTNND1-231ENST00000532463 CT55Q8WUE5 264 aa6.83□□□□□ -1.32
CTNND1-231ENST00000532463 FAM231BA6NCW3 169 aa6.83□□□□□ -1.32
CTNND1-231ENST00000532463 MP68P56378 58 aa6.83□□□□□ -1.32
CTNND1-231ENST00000532463 SS18Q15532 418 aa6.83□□□□□ -1.32
CTNND1-231ENST00000532463 ETDBQ3ZM63 59 aa6.83□□□□□ -1.32
CTNND1-231ENST00000532463 CFHR5Q9BXR6 569 aa6.83□□□□□ -1.32
CTNND1-231ENST00000532463 C21orf140B9A014 251 aa6.83□□□□□ -1.32
CTNND1-231ENST00000532463 KLRD1Q13241 179 aa6.83□□□□□ -1.32
CTNND1-231ENST00000532463 ZAR1Q86SH2 424 aa6.83□□□□□ -1.32
CTNND1-231ENST00000532463 DMRTC2Q8IXT2 367 aaPredicted RBP6.83□□□□□ -1.32
CTNND1-231ENST00000532463 LEAP2Q969E1 77 aa6.83□□□□□ -1.32
CTNND1-231ENST00000532463 TIAM2Q8IVF5 1701 aa6.82□□□□□ -1.32
CTNND1-231ENST00000532463 MAP1BP46821 2468 aaKnown RBP6.82□□□□□ -1.32
CTNND1-231ENST00000532463 RP1L1Q8IWN7 2480 aaPredicted RBP6.82□□□□□ -1.32
CTNND1-231ENST00000532463 SYS1-DBNDD2H3BUS1 97 aa6.82□□□□□ -1.32
CTNND1-231ENST00000532463 PRB4P10163 310 aaPredicted RBP6.82□□□□□ -1.32
CTNND1-231ENST00000532463 AZU1P20160 251 aa6.82□□□□□ -1.32
CTNND1-231ENST00000532463 PLAC1Q9HBJ0 212 aa6.82□□□□□ -1.32
CTNND1-231ENST00000532463 RPUSD1Q9UJJ7 312 aaKnown RBP6.82□□□□□ -1.32
CTNND1-231ENST00000532463 LRP6O75581 1613 aa6.82□□□□□ -1.32
CTNND1-231ENST00000532463 DRD3P35462 400 aa6.82□□□□□ -1.32
CTNND1-231ENST00000532463 PDLIM4P50479 330 aa6.82□□□□□ -1.32
CTNND1-231ENST00000532463 ZNF525Q8N782 197 aa6.82□□□□□ -1.32
CTNND1-231ENST00000532463 DIDO1Q9BTC0 2240 aaKnown RBP6.82□□□□□ -1.32
CTNND1-231ENST00000532463 D6R8Y8 96 aa6.82□□□□□ -1.32
CTNND1-231ENST00000532463 K7EP13 123 aa6.82□□□□□ -1.32
CTNND1-231ENST00000532463 PPIFP30405 207 aaKnown RBP6.82□□□□□ -1.32
CTNND1-231ENST00000532463 APOBEC3AP31941 199 aaPredicted RBP6.82□□□□□ -1.32
CTNND1-231ENST00000532463 ZIC1Q15915 447 aa6.82□□□□□ -1.32
CTNND1-231ENST00000532463 TMEM196Q5HYL7 178 aa6.82□□□□□ -1.32
CTNND1-231ENST00000532463 DPM3Q9P2X0 92 aa6.82□□□□□ -1.32
CTNND1-231ENST00000532463 IGLV3-27P01718 113 aa6.82□□□□□ -1.32
CTNND1-231ENST00000532463 C3orf79P0CE67 100 aa6.82□□□□□ -1.32
CTNND1-231ENST00000532463 CMC4P56277 68 aaPredicted RBP6.82□□□□□ -1.32
CTNND1-231ENST00000532463 OCC1Q8TAD7 63 aa6.82□□□□□ -1.32
CTNND1-231ENST00000532463 GLMPQ8WWB7 406 aa6.82□□□□□ -1.32
CTNND1-231ENST00000532463 C1orf159Q96HA4 380 aa6.82□□□□□ -1.32
CTNND1-231ENST00000532463 TRBV5-7A0A0A0MS05 114 aa6.81□□□□□ -1.32
CTNND1-231ENST00000532463 C9orf118A6NHY6 69 aa6.81□□□□□ -1.32
CTNND1-231ENST00000532463 CCL3P10147 92 aa6.81□□□□□ -1.32
CTNND1-231ENST00000532463 IGFBP3P17936 291 aaPredicted RBP6.81□□□□□ -1.32
CTNND1-231ENST00000532463 C8orf31Q8N9H6 132 aa6.81□□□□□ -1.32
CTNND1-231ENST00000532463 NKAPP1Q8N9T2 125 aa6.81□□□□□ -1.32
CTNND1-231ENST00000532463 UBE2E2Q96LR5 201 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms