RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 OR10G8Q8NGN5 311 aa6.53□□□□□ -1.36
CTNND1-230ENST00000532245 FCER1GP30273 86 aa6.53□□□□□ -1.36
CTNND1-230ENST00000532245 CFHR2P36980 270 aa6.53□□□□□ -1.36
CTNND1-230ENST00000532245 CD81P60033 236 aa6.53□□□□□ -1.36
CTNND1-230ENST00000532245 CX3CL1P78423 397 aa6.53□□□□□ -1.36
CTNND1-230ENST00000532245 BSXQ3C1V8 233 aa6.53□□□□□ -1.36
CTNND1-230ENST00000532245 NHLRC3Q5JS37 347 aa6.53□□□□□ -1.36
CTNND1-230ENST00000532245 HIST2H2BCQ6DN03 193 aa6.53□□□□□ -1.36
CTNND1-230ENST00000532245 C11orf42Q8N5U0 333 aa6.53□□□□□ -1.36
CTNND1-230ENST00000532245 NAT8Q9UHE5 227 aa6.53□□□□□ -1.36
CTNND1-230ENST00000532245 SPG11Q96JI7 2443 aa6.53□□□□□ -1.36
CTNND1-230ENST00000532245 FCN1O00602 326 aa6.53□□□□□ -1.36
CTNND1-230ENST00000532245 IL6RP08887 468 aaPredicted RBP6.53□□□□□ -1.36
CTNND1-230ENST00000532245 PAX8Q06710 450 aa6.53□□□□□ -1.36
CTNND1-230ENST00000532245 ICAM4Q14773 271 aa6.53□□□□□ -1.36
CTNND1-230ENST00000532245 TWIST1Q15672 202 aa6.53□□□□□ -1.36
CTNND1-230ENST00000532245 C5orf64Q2M2E5 130 aa6.53□□□□□ -1.36
CTNND1-230ENST00000532245 MRPL54Q6P161 138 aaKnown RBP6.53□□□□□ -1.36
CTNND1-230ENST00000532245 GOLT1AQ6ZVE7 132 aa6.53□□□□□ -1.36
CTNND1-230ENST00000532245 FAM110DQ8TAY7 271 aaPredicted RBP6.53□□□□□ -1.36
CTNND1-230ENST00000532245 Q8TCH9 128 aa6.53□□□□□ -1.36
CTNND1-230ENST00000532245 GLMPQ8WWB7 406 aa6.53□□□□□ -1.36
CTNND1-230ENST00000532245 NOL4LQ96MY1 436 aaPredicted RBP6.53□□□□□ -1.36
CTNND1-230ENST00000532245 SPOCK3Q9BQ16 436 aa6.53□□□□□ -1.36
CTNND1-230ENST00000532245 MPZP25189 248 aa6.52□□□□□ -1.36
CTNND1-230ENST00000532245 LINC00205P59089 165 aa6.52□□□□□ -1.36
CTNND1-230ENST00000532245 RNASEKQ6P5S7 137 aaKnown RBP6.52□□□□□ -1.36
CTNND1-230ENST00000532245 SEM1Q6ZVN7 128 aa6.52□□□□□ -1.36
CTNND1-230ENST00000532245 RNASEH2CQ8TDP1 164 aaKnown RBP6.52□□□□□ -1.36
CTNND1-230ENST00000532245 TEX50A0A1B0GTY4 177 aa6.52□□□□□ -1.37
CTNND1-230ENST00000532245 RNF224P0DH78 156 aa6.52□□□□□ -1.37
CTNND1-230ENST00000532245 GATA4P43694 442 aa6.52□□□□□ -1.37
CTNND1-230ENST00000532245 KIR3DL3Q8N743 410 aa6.52□□□□□ -1.37
CTNND1-230ENST00000532245 SIGLECL1Q8N7X8 197 aa6.52□□□□□ -1.37
CTNND1-230ENST00000532245 RAB24Q969Q5 203 aa6.52□□□□□ -1.37
CTNND1-230ENST00000532245 HEATR5AQ86XA9 2040 aa6.52□□□□□ -1.37
CTNND1-230ENST00000532245 IGLV3-9A0A075B6K5 115 aa6.52□□□□□ -1.37
CTNND1-230ENST00000532245 RIGQ13278 110 aa6.52□□□□□ -1.37
CTNND1-230ENST00000532245 PRSS8Q16651 343 aa6.52□□□□□ -1.37
CTNND1-230ENST00000532245 FAM74A4Q5TZK3 123 aa6.52□□□□□ -1.37
CTNND1-230ENST00000532245 SIGIRRQ6IA17 410 aa6.52□□□□□ -1.37
CTNND1-230ENST00000532245 LINC01587Q99440 93 aa6.52□□□□□ -1.37
CTNND1-230ENST00000532245 PHLDA3Q9Y5J5 127 aa6.52□□□□□ -1.37
CTNND1-230ENST00000532245 H0YJW9 148 aa6.52□□□□□ -1.37
CTNND1-230ENST00000532245 J3QLI3 93 aa6.52□□□□□ -1.37
CTNND1-230ENST00000532245 H2BFSP57053 126 aa6.52□□□□□ -1.37
CTNND1-230ENST00000532245 TFF3Q07654 80 aa6.52□□□□□ -1.37
CTNND1-230ENST00000532245 FAM159AQ6UWV7 190 aa6.52□□□□□ -1.37
CTNND1-230ENST00000532245 C1orf122Q6ZSJ8 110 aa6.52□□□□□ -1.37
CTNND1-230ENST00000532245 FAM210BQ96KR6 192 aa6.52□□□□□ -1.37
CTNND1-230ENST00000532245 DUX3Q96PT4 197 aa6.52□□□□□ -1.37
CTNND1-230ENST00000532245 SH3BGRL3Q9H299 93 aa6.52□□□□□ -1.37
CTNND1-230ENST00000532245 IGHV4-61A0A0C4DH41 118 aa6.52□□□□□ -1.37
CTNND1-230ENST00000532245 C9JCJ5 164 aa6.52□□□□□ -1.37
CTNND1-230ENST00000532245 HSBP1O75506 76 aa6.52□□□□□ -1.37
CTNND1-230ENST00000532245 NDUFB4O95168 129 aa6.52□□□□□ -1.37
CTNND1-230ENST00000532245 WDR86Q86TI4 376 aa6.52□□□□□ -1.37
CTNND1-230ENST00000532245 GALNT14Q96FL9 552 aa6.52□□□□□ -1.37
CTNND1-230ENST00000532245 OBSL1O75147 1896 aa6.51□□□□□ -1.37
CTNND1-230ENST00000532245 MPTX1A8MV57 137 aa6.51□□□□□ -1.37
CTNND1-230ENST00000532245 HOXA3O43365 443 aaPredicted RBP6.51□□□□□ -1.37
CTNND1-230ENST00000532245 IGHV4-39P01824 125 aa6.51□□□□□ -1.37
CTNND1-230ENST00000532245 TMEM37Q8WXS4 190 aa6.51□□□□□ -1.37
CTNND1-230ENST00000532245 PMCHP20382 165 aa6.51□□□□□ -1.37
CTNND1-230ENST00000532245 LEMD1Q68G75 181 aa6.51□□□□□ -1.37
CTNND1-230ENST00000532245 C2CD4CQ8TF44 421 aa6.51□□□□□ -1.37
CTNND1-230ENST00000532245 GATAD1Q8WUU5 269 aa6.51□□□□□ -1.37
CTNND1-230ENST00000532245 WFDC12Q8WWY7 111 aa6.51□□□□□ -1.37
CTNND1-230ENST00000532245 CLDN34H7C241 214 aa6.51□□□□□ -1.37
CTNND1-230ENST00000532245 RBFOX2O43251 390 aaKnown RBP eCLIP6.51□□□□□ -1.374e-7■■■■□ 19.5
CTNND1-230ENST00000532245 GGCTO75223 188 aaKnown RBP6.51□□□□□ -1.37
CTNND1-230ENST00000532245 FABP4P15090 132 aa6.51□□□□□ -1.37
CTNND1-230ENST00000532245 ZNF345Q14585 488 aa6.51□□□□□ -1.37
CTNND1-230ENST00000532245 AANATQ16613 207 aa6.51□□□□□ -1.37
CTNND1-230ENST00000532245 ZNF257Q9Y2Q1 563 aa6.51□□□□□ -1.37
CTNND1-230ENST00000532245 CLLU1Q5K131 121 aa6.51□□□□□ -1.37
CTNND1-230ENST00000532245 MED13Q9UHV7 2174 aa6.51□□□□□ -1.37
CTNND1-230ENST00000532245 LOXP28300 417 aaPredicted RBP6.5□□□□□ -1.37
CTNND1-230ENST00000532245 TMEM249Q2WGJ8 235 aa6.5□□□□□ -1.37
CTNND1-230ENST00000532245 DPPA3Q6W0C5 159 aa6.5□□□□□ -1.37
CTNND1-230ENST00000532245 ZNF600Q6ZNG1 722 aa6.5□□□□□ -1.37
CTNND1-230ENST00000532245 C9orf62Q8N4C0 152 aa6.5□□□□□ -1.37
CTNND1-230ENST00000532245 MRPL32Q9BYC8 188 aaKnown RBP6.5□□□□□ -1.37
CTNND1-230ENST00000532245 BET1LQ9NYM9 111 aa6.5□□□□□ -1.37
CTNND1-230ENST00000532245 NAPSAO96009 420 aa6.5□□□□□ -1.37
CTNND1-230ENST00000532245 HLA-DRB1P01911 266 aa6.5□□□□□ -1.37
CTNND1-230ENST00000532245 PRB4P10163 310 aaPredicted RBP6.5□□□□□ -1.37
CTNND1-230ENST00000532245 CXCL2P19875 107 aa6.5□□□□□ -1.37
CTNND1-230ENST00000532245 CRYBB3P26998 211 aa6.5□□□□□ -1.37
CTNND1-230ENST00000532245 PRCDQ00LT1 54 aa6.5□□□□□ -1.37
CTNND1-230ENST00000532245 FAM162BQ5T6X4 162 aa6.5□□□□□ -1.37
CTNND1-230ENST00000532245 UQCC3Q6UW78 93 aa6.5□□□□□ -1.37
CTNND1-230ENST00000532245 TMEM167AQ8TBQ9 72 aa6.5□□□□□ -1.37
CTNND1-230ENST00000532245 NPCDR1Q9BY65 106 aa6.5□□□□□ -1.37
CTNND1-230ENST00000532245 KIAA2026Q5HYC2 2103 aa6.5□□□□□ -1.37
CTNND1-230ENST00000532245 LRRK1Q38SD2 2015 aa6.5□□□□□ -1.37
CTNND1-230ENST00000532245 OR4C46A6NHA9 309 aa6.5□□□□□ -1.37
CTNND1-230ENST00000532245 SNURFLB1AK76 121 aa6.5□□□□□ -1.37
CTNND1-230ENST00000532245 C19orf84I3L1E1 186 aa6.5□□□□□ -1.37
CTNND1-230ENST00000532245 UBE2L6O14933 153 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms