RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 PVALBP20472 110 aaPredicted RBP9.76□□□□□ -0.85
COPB1-208ENST00000532088 SNCAP37840 140 aa9.76□□□□□ -0.85
COPB1-208ENST00000532088 RAP2BP61225 183 aa9.76□□□□□ -0.85
COPB1-208ENST00000532088 POLR2GP62487 172 aaKnown RBP eCLIP9.76□□□□□ -0.85
COPB1-208ENST00000532088 FGL1Q08830 312 aa9.76□□□□□ -0.85
COPB1-208ENST00000532088 RAB32Q13637 225 aa9.76□□□□□ -0.85
COPB1-208ENST00000532088 FAM223AQ8IWN6 122 aa9.76□□□□□ -0.85
COPB1-208ENST00000532088 SLC24A4Q8NFF2 622 aa9.76□□□□□ -0.85
COPB1-208ENST00000532088 OR5AU1Q8NGC0 362 aa9.76□□□□□ -0.85
COPB1-208ENST00000532088 TAF15Q92804 592 aaKnown RBP eCLIP9.76□□□□□ -0.85
COPB1-208ENST00000532088 P2RX4Q99571 388 aa9.76□□□□□ -0.85
COPB1-208ENST00000532088 AP5S1Q9NUS5 200 aa9.76□□□□□ -0.85
COPB1-208ENST00000532088 DEDDO75618 318 aa9.75□□□□□ -0.85
COPB1-208ENST00000532088 NXPH3O95157 252 aa9.75□□□□□ -0.85
COPB1-208ENST00000532088 SCGB1D2O95969 90 aa9.75□□□□□ -0.85
COPB1-208ENST00000532088 RNASE2P10153 161 aaKnown RBP9.75□□□□□ -0.85
COPB1-208ENST00000532088 DEFA4P12838 97 aa9.75□□□□□ -0.85
COPB1-208ENST00000532088 EXOSC2Q13868 293 aaKnown RBP9.75□□□□□ -0.85
COPB1-208ENST00000532088 SPINK9Q5DT21 86 aa9.75□□□□□ -0.85
COPB1-208ENST00000532088 FAM209BQ5JX69 171 aa9.75□□□□□ -0.85
COPB1-208ENST00000532088 TMEM65Q6PI78 240 aa9.75□□□□□ -0.85
COPB1-208ENST00000532088 ZNF329Q86UD4 541 aa9.75□□□□□ -0.85
COPB1-208ENST00000532088 NECAP1Q8NC96 275 aa9.75□□□□□ -0.85
COPB1-208ENST00000532088 OR5T1Q8NG75 326 aa9.75□□□□□ -0.85
COPB1-208ENST00000532088 RNASEH2CQ8TDP1 164 aaKnown RBP9.75□□□□□ -0.85
COPB1-208ENST00000532088 PPP1R1CQ8WVI7 109 aa9.75□□□□□ -0.85
COPB1-208ENST00000532088 USMG5Q96IX5 58 aa9.75□□□□□ -0.85
COPB1-208ENST00000532088 ATP6V0BQ99437 205 aa9.75□□□□□ -0.85
COPB1-208ENST00000532088 MAGT1Q9H0U3 335 aa9.75□□□□□ -0.85
COPB1-208ENST00000532088 C11orf1Q9H5F2 150 aa9.75□□□□□ -0.85
COPB1-208ENST00000532088 A0A0G2JLM5 398 aa9.74□□□□□ -0.85
COPB1-208ENST00000532088 APELAP0DMC3 54 aa9.74□□□□□ -0.85
COPB1-208ENST00000532088 LYL1P12980 280 aa9.74□□□□□ -0.85
COPB1-208ENST00000532088 NPY1RP25929 384 aa9.74□□□□□ -0.85
COPB1-208ENST00000532088 RAB9AP51151 201 aa9.74□□□□□ -0.85
COPB1-208ENST00000532088 RAB11AP62491 216 aa9.74□□□□□ -0.85
COPB1-208ENST00000532088 RPL23AP62750 156 aaKnown RBP9.74□□□□□ -0.85
COPB1-208ENST00000532088 NF1P21359 2839 aa9.73□□□□□ -0.85
COPB1-208ENST00000532088 E5RGE8 158 aa9.73□□□□□ -0.85
COPB1-208ENST00000532088 L7N2F9 121 aa9.73□□□□□ -0.85
COPB1-208ENST00000532088 SSSCA1O60232 199 aa9.73□□□□□ -0.85
COPB1-208ENST00000532088 MPC2O95563 127 aa9.73□□□□□ -0.85
COPB1-208ENST00000532088 IFNA10P01566 189 aa9.73□□□□□ -0.85
COPB1-208ENST00000532088 REG1AP05451 166 aa9.73□□□□□ -0.85
COPB1-208ENST00000532088 PF4V1P10720 104 aa9.73□□□□□ -0.85
COPB1-208ENST00000532088 IAPPP10997 89 aa9.73□□□□□ -0.85
COPB1-208ENST00000532088 BCAP31P51572 246 aa9.73□□□□□ -0.85
COPB1-208ENST00000532088 PAX9P55771 341 aa9.73□□□□□ -0.85
COPB1-208ENST00000532088 S100A10P60903 97 aa9.73□□□□□ -0.85
COPB1-208ENST00000532088 VAMP2P63027 116 aa9.73□□□□□ -0.85
COPB1-208ENST00000532088 CD83Q01151 205 aa9.73□□□□□ -0.85
COPB1-208ENST00000532088 SLC25A24Q6NUK1 477 aa9.73□□□□□ -0.85
COPB1-208ENST00000532088 PRSS54Q6PEW0 395 aa9.73□□□□□ -0.85
COPB1-208ENST00000532088 TMEM14EPQ6UXP3 125 aa9.73□□□□□ -0.85
COPB1-208ENST00000532088 VN1R17PQ8TDU5 208 aa9.73□□□□□ -0.85
COPB1-208ENST00000532088 CXorf58Q96LI9 332 aa9.73□□□□□ -0.85
COPB1-208ENST00000532088 UBE2E2Q96LR5 201 aa9.73□□□□□ -0.85
COPB1-208ENST00000532088 ZNF747Q9BV97 191 aa9.73□□□□□ -0.85
COPB1-208ENST00000532088 ZNF355PQ9NSJ1 428 aa9.73□□□□□ -0.85
COPB1-208ENST00000532088 PSENENQ9NZ42 101 aa9.73□□□□□ -0.85
COPB1-208ENST00000532088 STRAPQ9Y3F4 350 aaKnown RBP9.73□□□□□ -0.85
COPB1-208ENST00000532088 LSM5Q9Y4Y9 91 aaKnown RBP9.73□□□□□ -0.85
COPB1-208ENST00000532088 DMRT1Q9Y5R6 373 aa9.73□□□□□ -0.85
COPB1-208ENST00000532088 RPS10-NUDT3A0A1W2PQS6 291 aa9.72□□□□□ -0.85
COPB1-208ENST00000532088 C15orf62A8K5M9 175 aa9.72□□□□□ -0.85
COPB1-208ENST00000532088 TMEM50AO95807 157 aa9.72□□□□□ -0.85
COPB1-208ENST00000532088 TRGV3P03979 118 aa9.72□□□□□ -0.85
COPB1-208ENST00000532088 FCGR2BP31994 310 aaPredicted RBP9.72□□□□□ -0.85
COPB1-208ENST00000532088 P2RY1P47900 373 aa9.72□□□□□ -0.85
COPB1-208ENST00000532088 CDX1P47902 265 aaPredicted RBP9.72□□□□□ -0.85
COPB1-208ENST00000532088 MFAP2P55001 183 aa9.72□□□□□ -0.85
COPB1-208ENST00000532088 TPPP2P59282 170 aa9.72□□□□□ -0.85
COPB1-208ENST00000532088 RHOGP84095 191 aa9.72□□□□□ -0.85
COPB1-208ENST00000532088 KIAA0141Q14154 515 aaPredicted RBP9.72□□□□□ -0.85
COPB1-208ENST00000532088 TCTEX1D4Q5JR98 221 aa9.72□□□□□ -0.85
COPB1-208ENST00000532088 ETFRF1Q6IPR1 90 aa9.72□□□□□ -0.85
COPB1-208ENST00000532088 C10orf99Q6UWK7 81 aa9.72□□□□□ -0.85
COPB1-208ENST00000532088 ZNF491Q8N8L2 437 aa9.72□□□□□ -0.85
COPB1-208ENST00000532088 TMEM170AQ8WVE7 144 aa9.72□□□□□ -0.85
COPB1-208ENST00000532088 CITED1Q99966 193 aa9.72□□□□□ -0.85
COPB1-208ENST00000532088 KLK15Q9H2R5 256 aa9.72□□□□□ -0.85
COPB1-208ENST00000532088 LYRM2Q9NU23 88 aaPredicted RBP9.72□□□□□ -0.85
COPB1-208ENST00000532088 FBXL7Q9UJT9 491 aa9.72□□□□□ -0.85
COPB1-208ENST00000532088 TSSC4Q9Y5U2 329 aaPredicted RBP9.72□□□□□ -0.85
COPB1-208ENST00000532088 SETD2Q9BYW2 2564 aaPredicted RBP9.71□□□□□ -0.85
COPB1-208ENST00000532088 H0YIZ8 118 aa9.71□□□□□ -0.86
COPB1-208ENST00000532088 I3L2K1 104 aa9.71□□□□□ -0.86
COPB1-208ENST00000532088 OR2J3O76001 311 aa9.71□□□□□ -0.86
COPB1-208ENST00000532088 OR8U8P0C7N1 319 aa9.71□□□□□ -0.86
COPB1-208ENST00000532088 SLC25A4P12235 298 aa9.71□□□□□ -0.86
COPB1-208ENST00000532088 GPX4P36969 197 aaPredicted RBP9.71□□□□□ -0.86
COPB1-208ENST00000532088 RUNX1Q01196 453 aa9.71□□□□□ -0.86
COPB1-208ENST00000532088 ATP5G2Q06055 141 aa9.71□□□□□ -0.86
COPB1-208ENST00000532088 SPANXN5Q5MJ07 72 aa9.71□□□□□ -0.86
COPB1-208ENST00000532088 C11orf87Q6NUJ2 197 aa9.71□□□□□ -0.86
COPB1-208ENST00000532088 NDUFA11Q86Y39 141 aa9.71□□□□□ -0.86
COPB1-208ENST00000532088 THAP6Q8TBB0 222 aa9.71□□□□□ -0.86
COPB1-208ENST00000532088 CACNG8Q8WXS5 425 aa9.71□□□□□ -0.86
COPB1-208ENST00000532088 TXN2Q99757 166 aa9.71□□□□□ -0.86
COPB1-208ENST00000532088 RNF126Q9BV68 326 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms