RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 H1FXQ92522 213 aaKnown RBP2.2□□□□□ -2.06
USP47-211ENST00000531513 AIF1LQ9BQI0 150 aa2.2□□□□□ -2.06
USP47-211ENST00000531513 HSPB11Q9Y547 144 aa2.2□□□□□ -2.06
USP47-211ENST00000531513 TIMM22Q9Y584 194 aa2.2□□□□□ -2.06
USP47-211ENST00000531513 SLIT2O94813 1529 aa2.2□□□□□ -2.06
USP47-211ENST00000531513 KIF24Q5T7B8 1368 aa2.2□□□□□ -2.06
USP47-211ENST00000531513 WDR90Q96KV7 1748 aa2.2□□□□□ -2.06
USP47-211ENST00000531513 IRGMA1A4Y4 181 aa2.19□□□□□ -2.06
USP47-211ENST00000531513 FABP5P3A8MUU1 101 aa2.19□□□□□ -2.06
USP47-211ENST00000531513 H3BT86 120 aa2.19□□□□□ -2.06
USP47-211ENST00000531513 CREBL2O60519 120 aaPredicted RBP2.19□□□□□ -2.06
USP47-211ENST00000531513 C1QBP02746 253 aa2.19□□□□□ -2.06
USP47-211ENST00000531513 MSMBP08118 114 aa2.19□□□□□ -2.06
USP47-211ENST00000531513 SCGB1A1P11684 91 aa2.19□□□□□ -2.06
USP47-211ENST00000531513 CCR2P41597 374 aa2.19□□□□□ -2.06
USP47-211ENST00000531513 RPL28P46779 137 aaKnown RBP2.19□□□□□ -2.06
USP47-211ENST00000531513 RHOBP62745 196 aa2.19□□□□□ -2.06
USP47-211ENST00000531513 SCGB2B2Q4G0G5 96 aa2.19□□□□□ -2.06
USP47-211ENST00000531513 HCP5Q6MZN7 132 aa2.19□□□□□ -2.06
USP47-211ENST00000531513 AGTRAPQ6RW13 159 aa2.19□□□□□ -2.06
USP47-211ENST00000531513 OR51T1Q8NGJ9 327 aa2.19□□□□□ -2.06
USP47-211ENST00000531513 OR5J2Q8NH18 312 aa2.19□□□□□ -2.06
USP47-211ENST00000531513 PRNDQ9UKY0 176 aa2.19□□□□□ -2.06
USP47-211ENST00000531513 SSR3Q9UNL2 185 aa2.19□□□□□ -2.06
USP47-211ENST00000531513 HHLA3Q9XRX5 114 aa2.19□□□□□ -2.06
USP47-211ENST00000531513 CCL26Q9Y258 94 aa2.19□□□□□ -2.06
USP47-211ENST00000531513 CYSLTR1Q9Y271 337 aa2.19□□□□□ -2.06
USP47-211ENST00000531513 SLC35A3Q9Y2D2 325 aa2.19□□□□□ -2.06
USP47-211ENST00000531513 DOCK5Q9H7D0 1870 aa2.19□□□□□ -2.06
USP47-211ENST00000531513 SLX4Q8IY92 1834 aa2.19□□□□□ -2.06
USP47-211ENST00000531513 NYNRINQ9P2P1 1898 aaKnown RBP2.18□□□□□ -2.06
USP47-211ENST00000531513 SHROOM3Q8TF72 1996 aa2.18□□□□□ -2.06
USP47-211ENST00000531513 MUC21A0A0G2JKD1 596 aa2.18□□□□□ -2.06
USP47-211ENST00000531513 MUC21A0A140T8X8 626 aa2.18□□□□□ -2.06
USP47-211ENST00000531513 H7C1C5 153 aa2.18□□□□□ -2.06
USP47-211ENST00000531513 J3QRK9 145 aa2.18□□□□□ -2.06
USP47-211ENST00000531513 HMGB3O15347 200 aaKnown RBP2.18□□□□□ -2.06
USP47-211ENST00000531513 ORC5O43913 435 aa2.18□□□□□ -2.06
USP47-211ENST00000531513 SMIM17P0DL12 118 aa2.18□□□□□ -2.06
USP47-211ENST00000531513 S100GP29377 79 aa2.18□□□□□ -2.06
USP47-211ENST00000531513 G6PCP35575 357 aa2.18□□□□□ -2.06
USP47-211ENST00000531513 EVX1P49640 407 aa2.18□□□□□ -2.06
USP47-211ENST00000531513 EMP1P54849 157 aa2.18□□□□□ -2.06
USP47-211ENST00000531513 LCN6P62502 163 aa2.18□□□□□ -2.06
USP47-211ENST00000531513 PABPC1L2AQ5JQF8 200 aa2.18□□□□□ -2.06
USP47-211ENST00000531513 SPANXN3Q5MJ09 141 aa2.18□□□□□ -2.06
USP47-211ENST00000531513 DCUN1D2Q6PH85 259 aa2.18□□□□□ -2.06
USP47-211ENST00000531513 LYZL1Q6UWQ5 148 aa2.18□□□□□ -2.06
USP47-211ENST00000531513 TOMM20LQ6UXN7 152 aa2.18□□□□□ -2.06
USP47-211ENST00000531513 ZNF767PQ75MW2 155 aa2.18□□□□□ -2.06
USP47-211ENST00000531513 OR10K1Q8NGX5 313 aa2.18□□□□□ -2.06
USP47-211ENST00000531513 MALSU1Q96EH3 234 aa2.18□□□□□ -2.06
USP47-211ENST00000531513 PBDC1Q9BVG4 233 aa2.18□□□□□ -2.06
USP47-211ENST00000531513 ACER3Q9NUN7 267 aa2.18□□□□□ -2.06
USP47-211ENST00000531513 SPANXCQ9NY87 97 aa2.18□□□□□ -2.06
USP47-211ENST00000531513 TVP23BQ9NYZ1 205 aa2.18□□□□□ -2.06
USP47-211ENST00000531513 NAT8Q9UHE5 227 aa2.18□□□□□ -2.06
USP47-211ENST00000531513 MIA2Q96PC5 1412 aa2.17□□□□□ -2.06
USP47-211ENST00000531513 TRAV7A0A075B6U4 112 aa2.17□□□□□ -2.06
USP47-211ENST00000531513 IGKV3D-11A0A0A0MRZ8 115 aa2.17□□□□□ -2.06
USP47-211ENST00000531513 SDHAF1A6NFY7 115 aa2.17□□□□□ -2.06
USP47-211ENST00000531513 SIGLEC16A6NMB1 481 aa2.17□□□□□ -2.06
USP47-211ENST00000531513 OR2J2O76002 312 aa2.17□□□□□ -2.06
USP47-211ENST00000531513 IFNA7P01567 189 aa2.17□□□□□ -2.06
USP47-211ENST00000531513 GTF2A1P52655 376 aaPredicted RBP2.17□□□□□ -2.06
USP47-211ENST00000531513 DEFA3P59666 94 aa2.17□□□□□ -2.06
USP47-211ENST00000531513 SMCO1Q147U7 214 aa2.17□□□□□ -2.06
USP47-211ENST00000531513 TMEM78Q5T7P6 136 aa2.17□□□□□ -2.06
USP47-211ENST00000531513 Q6Q795 121 aa2.17□□□□□ -2.06
USP47-211ENST00000531513 SLC25A40Q8TBP6 338 aa2.17□□□□□ -2.06
USP47-211ENST00000531513 MRPS24Q96EL2 167 aaKnown RBP2.17□□□□□ -2.06
USP47-211ENST00000531513 C2orf50Q96LR7 162 aa2.17□□□□□ -2.06
USP47-211ENST00000531513 CHST6Q9GZX3 395 aa2.17□□□□□ -2.06
USP47-211ENST00000531513 PBOV1Q9GZY1 135 aa2.17□□□□□ -2.06
USP47-211ENST00000531513 GINS2Q9Y248 185 aa2.17□□□□□ -2.06
USP47-211ENST00000531513 TIMM9Q9Y5J7 89 aa2.17□□□□□ -2.06
USP47-211ENST00000531513 MAST2Q6P0Q8 1798 aa2.16□□□□□ -2.06
USP47-211ENST00000531513 TRBV19A0A075B6N1 114 aa2.16□□□□□ -2.06
USP47-211ENST00000531513 TRAV38-1A0A0B4J264 116 aa2.16□□□□□ -2.06
USP47-211ENST00000531513 TRAV4A0A0B4J268 109 aa2.16□□□□□ -2.06
USP47-211ENST00000531513 MAP1LC3B2A6NCE7 125 aa2.16□□□□□ -2.06
USP47-211ENST00000531513 E7EQ34 232 aa2.16□□□□□ -2.06
USP47-211ENST00000531513 BUB1B-PAK6H3BSN5 160 aa2.16□□□□□ -2.06
USP47-211ENST00000531513 MFSD11O43934 449 aa2.16□□□□□ -2.06
USP47-211ENST00000531513 PIAS1O75925 651 aa2.16□□□□□ -2.06
USP47-211ENST00000531513 DHFRP00374 187 aa2.16□□□□□ -2.06
USP47-211ENST00000531513 APOA2P02652 100 aa2.16□□□□□ -2.06
USP47-211ENST00000531513 LGALS3P17931 250 aaKnown RBP2.16□□□□□ -2.06
USP47-211ENST00000531513 NCALDP61601 193 aa2.16□□□□□ -2.06
USP47-211ENST00000531513 GNG5P63218 68 aa2.16□□□□□ -2.06
USP47-211ENST00000531513 ZNF90Q03938 601 aa2.16□□□□□ -2.06
USP47-211ENST00000531513 SS18Q15532 418 aa2.16□□□□□ -2.06
USP47-211ENST00000531513 FAM24BQ8N5W8 94 aa2.16□□□□□ -2.06
USP47-211ENST00000531513 Q9BRP9 147 aa2.16□□□□□ -2.06
USP47-211ENST00000531513 IMUPQ9GZP8 106 aa2.16□□□□□ -2.06
USP47-211ENST00000531513 MAP1LC3BQ9GZQ8 125 aa2.16□□□□□ -2.06
USP47-211ENST00000531513 LAMTOR3Q9UHA4 124 aa2.16□□□□□ -2.06
USP47-211ENST00000531513 KDM5BQ9UGL1 1544 aa2.16□□□□□ -2.06
USP47-211ENST00000531513 MYO16Q9Y6X6 1858 aa2.16□□□□□ -2.06
USP47-211ENST00000531513 ZNF407Q9C0G0 2248 aa2.15□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms