RNA–Protein interactions for RNA: ENST00000531406.1

TM9SF1-211, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 1,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-211ENST00000531406 CTRB1P17538 263 aa9.61□□□□□ -0.87
TM9SF1-211ENST00000531406 HLA-GP17693 338 aa9.61□□□□□ -0.87
TM9SF1-211ENST00000531406 RPL8P62917 257 aaKnown RBP9.61□□□□□ -0.87
TM9SF1-211ENST00000531406 CTRB2Q6GPI1 263 aa9.61□□□□□ -0.87
TM9SF1-211ENST00000531406 SSX9Q7RTT3 188 aa9.61□□□□□ -0.87
TM9SF1-211ENST00000531406 SLC16A13Q7RTY0 426 aa9.61□□□□□ -0.87
TM9SF1-211ENST00000531406 TMEM61Q8N0U2 210 aa9.61□□□□□ -0.87
TM9SF1-211ENST00000531406 OR51H1Q8NH63 302 aa9.61□□□□□ -0.87
TM9SF1-211ENST00000531406 EEF1AKMT3Q96AZ1 226 aa9.61□□□□□ -0.87
TM9SF1-211ENST00000531406 GALNT14Q96FL9 552 aa9.61□□□□□ -0.87
TM9SF1-211ENST00000531406 IGLV11-55A0A075B6I3 123 aa9.6□□□□□ -0.87
TM9SF1-211ENST00000531406 A0A0B4J293 547 aa9.6□□□□□ -0.87
TM9SF1-211ENST00000531406 CGB1A6NKQ9 187 aa9.6□□□□□ -0.87
TM9SF1-211ENST00000531406 A8MWP6 167 aa9.6□□□□□ -0.87
TM9SF1-211ENST00000531406 REG1AP05451 166 aa9.6□□□□□ -0.87
TM9SF1-211ENST00000531406 SERPINE2P07093 398 aa9.6□□□□□ -0.87
TM9SF1-211ENST00000531406 OR5AC1P0C628 307 aa9.6□□□□□ -0.87
TM9SF1-211ENST00000531406 DEFA4P12838 97 aa9.6□□□□□ -0.87
TM9SF1-211ENST00000531406 F2RP25116 425 aa9.6□□□□□ -0.87
TM9SF1-211ENST00000531406 OR4A47Q6IF82 309 aa9.6□□□□□ -0.87
TM9SF1-211ENST00000531406 UXS1Q8NBZ7 420 aa9.6□□□□□ -0.87
TM9SF1-211ENST00000531406 OR52B4Q8NGK2 314 aa9.6□□□□□ -0.87
TM9SF1-211ENST00000531406 CD300LFQ8TDQ1 290 aa9.6□□□□□ -0.87
TM9SF1-211ENST00000531406 FAM212BQ9NTI7 297 aaPredicted RBP9.6□□□□□ -0.87
TM9SF1-211ENST00000531406 MLXQ9UH92 298 aa9.6□□□□□ -0.87
TM9SF1-211ENST00000531406 TRBV7-1A0A0A6YYK4 115 aa9.59□□□□□ -0.87
TM9SF1-211ENST00000531406 A0A0B4J2A0 478 aa9.59□□□□□ -0.87
TM9SF1-211ENST00000531406 MFSD2BA6NFX1 497 aa9.59□□□□□ -0.87
TM9SF1-211ENST00000531406 CLEC3BP05452 202 aa9.59□□□□□ -0.87
TM9SF1-211ENST00000531406 RPA2P15927 270 aa9.59□□□□□ -0.87
TM9SF1-211ENST00000531406 OR2B8PP59922 312 aa9.59□□□□□ -0.87
TM9SF1-211ENST00000531406 TM4SF20Q53R12 229 aa9.59□□□□□ -0.87
TM9SF1-211ENST00000531406 SPAG16Q8N0X2 631 aa9.59□□□□□ -0.87
TM9SF1-211ENST00000531406 LGI3Q8N145 548 aa9.59□□□□□ -0.87
TM9SF1-211ENST00000531406 C12orf45Q8N5I9 185 aaPredicted RBP9.59□□□□□ -0.87
TM9SF1-211ENST00000531406 OR4A5Q8NH83 315 aa9.59□□□□□ -0.87
TM9SF1-211ENST00000531406 MITD1Q8WV92 249 aa9.59□□□□□ -0.87
TM9SF1-211ENST00000531406 AIFM2Q9BRQ8 373 aa9.59□□□□□ -0.87
TM9SF1-211ENST00000531406 MED28Q9H204 178 aa9.59□□□□□ -0.87
TM9SF1-211ENST00000531406 BET1LQ9NYM9 111 aa9.59□□□□□ -0.87
TM9SF1-211ENST00000531406 SHPKQ9UHJ6 478 aa9.59□□□□□ -0.87
TM9SF1-211ENST00000531406 TNCP24821 2201 aa9.58□□□□□ -0.88
TM9SF1-211ENST00000531406 RBFOX2O43251 390 aaKnown RBP eCLIP9.58□□□□□ -0.88
TM9SF1-211ENST00000531406 ATG12O94817 140 aa9.58□□□□□ -0.88
TM9SF1-211ENST00000531406 SCAF4O95104 1147 aaKnown RBP9.58□□□□□ -0.88
TM9SF1-211ENST00000531406 TRAPPC2P0DI81 140 aa9.58□□□□□ -0.88
TM9SF1-211ENST00000531406 TRAPPC2BP0DI82 140 aa9.58□□□□□ -0.88
TM9SF1-211ENST00000531406 UCP1P25874 307 aa9.58□□□□□ -0.88
TM9SF1-211ENST00000531406 RRAS2P62070 204 aaPredicted RBP9.58□□□□□ -0.88
TM9SF1-211ENST00000531406 SUPT4H1P63272 117 aaKnown RBP9.58□□□□□ -0.88
TM9SF1-211ENST00000531406 BTNL8Q6UX41 500 aa9.58□□□□□ -0.88
TM9SF1-211ENST00000531406 UNQ9165/PRO28630Q6UXU0 137 aa9.58□□□□□ -0.88
TM9SF1-211ENST00000531406 ZNF502Q8TBZ5 544 aa9.58□□□□□ -0.88
TM9SF1-211ENST00000531406 IL22RA2Q969J5 263 aa9.58□□□□□ -0.88
TM9SF1-211ENST00000531406 MARC2Q969Z3 335 aa9.58□□□□□ -0.88
TM9SF1-211ENST00000531406 CXorf58Q96LI9 332 aa9.58□□□□□ -0.88
TM9SF1-211ENST00000531406 TP53RKQ96S44 253 aa9.58□□□□□ -0.88
TM9SF1-211ENST00000531406 OVOL2Q9BRP0 275 aa9.58□□□□□ -0.88
TM9SF1-211ENST00000531406 GGTLC1Q9BX51 225 aa9.58□□□□□ -0.88
TM9SF1-211ENST00000531406 TMEM222Q9H0R3 208 aa9.58□□□□□ -0.88
TM9SF1-211ENST00000531406 LOC102724200A0A096LPH7 203 aaPredicted RBP9.57□□□□□ -0.88
TM9SF1-211ENST00000531406 TRAV3A0A0B4J244 114 aa9.57□□□□□ -0.88
TM9SF1-211ENST00000531406 TRAV25A0A0B4J276 109 aa9.57□□□□□ -0.88
TM9SF1-211ENST00000531406 A0A1B0GVG6 124 aa9.57□□□□□ -0.88
TM9SF1-211ENST00000531406 DUXBA0A1W2PPF3 345 aa9.57□□□□□ -0.88
TM9SF1-211ENST00000531406 IGLC7A0M8Q6 106 aa9.57□□□□□ -0.88
TM9SF1-211ENST00000531406 UPK2O00526 184 aa9.57□□□□□ -0.88
TM9SF1-211ENST00000531406 C8orf88P0DMB2 117 aa9.57□□□□□ -0.88
TM9SF1-211ENST00000531406 TMEM187Q14656 261 aa9.57□□□□□ -0.88
TM9SF1-211ENST00000531406 POU2AF1Q16633 256 aa9.57□□□□□ -0.88
TM9SF1-211ENST00000531406 ANKRD55Q3KP44 614 aa9.57□□□□□ -0.88
TM9SF1-211ENST00000531406 SP6Q3SY56 376 aa9.57□□□□□ -0.88
TM9SF1-211ENST00000531406 RNASE11Q8TAA1 199 aaKnown RBP9.57□□□□□ -0.88
TM9SF1-211ENST00000531406 PLECQ15149 4684 aaKnown RBP9.57□□□□□ -0.88
TM9SF1-211ENST00000531406 HPRT1P00492 218 aa9.56□□□□□ -0.88
TM9SF1-211ENST00000531406 IFNA21P01568 189 aa9.56□□□□□ -0.88
TM9SF1-211ENST00000531406 NQO2P16083 231 aa9.56□□□□□ -0.88
TM9SF1-211ENST00000531406 GPR183P32249 361 aa9.56□□□□□ -0.88
TM9SF1-211ENST00000531406 BCAP31P51572 246 aa9.56□□□□□ -0.88
TM9SF1-211ENST00000531406 ERVK-16P61578 105 aa9.56□□□□□ -0.88
TM9SF1-211ENST00000531406 ZNF585BQ52M93 769 aa9.56□□□□□ -0.88
TM9SF1-211ENST00000531406 TMEM268Q5VZI3 342 aa9.56□□□□□ -0.88
TM9SF1-211ENST00000531406 LRTM2Q8N967 370 aa9.56□□□□□ -0.88
TM9SF1-211ENST00000531406 RBPMSQ93062 196 aaKnown RBP9.56□□□□□ -0.88
TM9SF1-211ENST00000531406 SRSF8Q9BRL6 282 aaKnown RBP9.56□□□□□ -0.88
TM9SF1-211ENST00000531406 COMMD5Q9GZQ3 224 aa9.56□□□□□ -0.88
TM9SF1-211ENST00000531406 COMMD9Q9P000 198 aa9.56□□□□□ -0.88
TM9SF1-211ENST00000531406 MRPL27Q9P0M9 148 aaKnown RBP9.56□□□□□ -0.88
TM9SF1-211ENST00000531406 MGAT4CQ9UBM8 478 aa9.56□□□□□ -0.88
TM9SF1-211ENST00000531406 UFC1Q9Y3C8 167 aa9.56□□□□□ -0.88
TM9SF1-211ENST00000531406 IGHV3-35A0A0C4DH35 117 aa9.55□□□□□ -0.88
TM9SF1-211ENST00000531406 GOSR2O14653 212 aa9.55□□□□□ -0.88
TM9SF1-211ENST00000531406 CDS2O95674 445 aa9.55□□□□□ -0.88
TM9SF1-211ENST00000531406 AKR1C2P52895 323 aa9.55□□□□□ -0.88
TM9SF1-211ENST00000531406 ELLP55199 621 aaPredicted RBP9.55□□□□□ -0.88
TM9SF1-211ENST00000531406 RBPMS2Q6ZRY4 209 aaKnown RBP9.55□□□□□ -0.88
TM9SF1-211ENST00000531406 CADM3Q8N126 398 aa9.55□□□□□ -0.88
TM9SF1-211ENST00000531406 OR2C3Q8N628 320 aa9.55□□□□□ -0.88
TM9SF1-211ENST00000531406 OR10W1Q8NGF6 305 aa9.55□□□□□ -0.88
TM9SF1-211ENST00000531406 OR1L6Q8NGR2 347 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms